XLOC_043546 (gene) - C. hemisphaerica

Overview
NameXLOC_043546
Unique NameXLOC_043546
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_511:209766..219328-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043546 ID=XLOC_043546|Name=XLOC_043546|organism=Clytia hemisphaerica|type=gene|length=9563bp|location=Sequence derived from alignment at scaffold_511:209766..219328- (Clytia hemisphaerica)
NGCTTATGTAATTTGAATGAAATCTAACGTTAATAACAAAACAGCCATCC TTTTTTTTTAAGAAACCCTGAGAACAAGATAATTTGTTAAAGTCATATGC TGATATTATGCTTGTCTTCTGACATCTGCTGGCGAAAGTGTAATTGAATT TTAAAATATTGTCACAGTATGCCTTGTAAAAAACTACGGTTTAGTCTTTT TTTGTATTATCAAAATTTATGTAACCTTGATGTAACCTAAGATTGGATTG AAAACACCTCAACGTTTTTCGACACTAAACCAAACATCGCCTTTGGGAAA TTGGGAGCGCGATTTGGGGTCTGGAATCAATTCATCCACAGTTTTCGAAC ACGGGATGACTTTATATTTACTCAACATGCGGGCCACCACAATTTTCACT TCCATGGTGGCAAAACGTTGCGCAATACAATTTCTCGGACCGTGTCCGAA TCCACCGGACGCGAACGGGTGTCTGTCAGCTTTCTTTTCGGCACTGAAAT TCTCAGGGTCAAAAACATTCGGGTTGGAGAAATATTTCTCATCTTTTACA ATACCAGTGACGGGAAAACGGACAACGATATCTTTCGGGATGACCATTTC AGTGCCTGGAATTTTGTAATCGTTAACTGAACCACGTTCCAAGTGGGTCA CAGGATACATTCTAAGACTCTCTTGGAAGAATTTCTCCATATACGGCATA TTCATGATAGCAGCGTAATCGAATTGATCAGAGCATGTTGACTCGATACT TTCTTTGATCTCTTGGTAAAGTTTCTCTTGGCAATCCTGGTTTTTAGCCA AGAAATACATCATCATGGAGGAAGTACTTGAAACAGTATCAACACCAGCG ATTAACATGATCAGGGAGTTCGCGATGACAATTCTCTCGATTTCGTCTTT TTGTCGTTTCGTTTCTTCTGACTTTTCATTTGTCTTGATTTCTTCATTTT CCTTCTGAAGGATATCGAGACAAGTATCAATAAAGTCATTGCGTCTCTCC CCACTCTCCTGGCGTTCTTTGATCGCCTTCCTAACAGCTGCAACAAAAAA ACCCTCTCCTTTCTTGTCAAGAAGCGGCCAATCCAGTTTCCTCAATAAAC TTGGGAAAAACAAAAACATTAGGAAAGTCAAAAATATCTTGATACTCATT GTTTTGCCAACCATCAAGTCTGCGTTCGTCTTGAAGATGCTGTTAGTCTC ATTGACGCTATCGCTCTCATAACCAAAACCTGTGCTTACAATCACATCTA ATGCATAGTTTCGCAATAATTCTTTGGCTTCGATTTCTTTACCAACATTT TTCTCTAGAAAGATATCGCAGTGATCGGCAATTTTGTGTATGAGCGGAAC CATGGCTTTTAGTTTCCCACTGGTAAAAACAGGTGTCAGTGAAGCTCGAA CACTCTTCCATTGCTGGCCACGCAGTTCAGTTAGCATTACTGGTAGATAT CGGTTGTTCTTTGTGTGAGGATTATAAGCGTTAGAAGATGCCGGCTTTCT TTCCATAAATTGGTCAAAATCTTTCACCAAAACTTTCTTAGCAATATCCA AGTCTCGAATCACGATGCTTGGACGACCAAATAATTCATACGTCCCAACA ACAGGGGCATCTGGGTAATTCTTGTAAGCATGGTCCGTCATTTGGATGAA AGCGATTTTCTGCTTGAAGAAATCCCACACATGTTGACTTCCAAATGGAA AGGTTCCAGGATCAACAGGAATACCTCGACGCTGCCAAAATGTCATTCTA TGTCTGACAAAGAAATAAAAGGCTGTAAAAGCCACGATAAACGCAGCTAA CAATATCTGCCACCACATTACGCTAAATCTTCTTGCTTGTTCTGTAGCTC TTTTTACTGTTGGCGAAAGCTCTGTAAACTTAAAATTTAGATTGTAAAAA CTGTTATTGAAATGCAAGTTTTCTCGTGCATCCTGTTTATATAAAAGTTT CAAGGTTTGATGAAATCATCAAATTTCAAAACATGAAACACTCTCCTTTT TTAGAAGAAGGTTTTTGTTGACTGTTCCATAAAATTGATGATTTCCTTCA GAGAGCTTGTTAGCAAAAACCGCAGAAAATCGTTAATGATAAAAATATCA AGATGAGTGACATAATACATGCTTTACTGTTGATGAAGGAAGCACTTTTA ATGAAACAGAGAGAGAGCTGATAAAAGCTTCCTTGAAAAACTGTCATTAA ACAATGATACAATCCAGAGCTTTAATTAACTGTTTTGAAACTCGATATTA TCATTTCTTAACATACCTTAACCCATCTCCCTTTTTTTATTAGGGGAAGC ATGCTCAACGGCAAAAAGGATGGTCTGTTAAGTTGCGTTGCGTTTTCACG GAAAATCAGTATCTGTCCTTGTTCGTCGTTAATGGAGTATTACATACCTT CTAGCAATCTCTGGATCCCTTTTTTGATATGAAATACCGATCATAAACCT TAATTTGAGACAAATAAGTTCTTATTTTGTTCAATTTTTTAAAAAGTAAC ATTTTTTGTGCTTTGTGTTTCCTTAAAGCAGTTTTTCCGCTTGCATGCAG AAAACGCAACGAGAATTAATCACTCCGGGCGGAGAGTATTGCCGGATAGT CCCTCTATCGGATTCCCACTCAGCACAAATTCTCAATTTAAGACGGGGGG TTAAAAATCAAAATTTTCTGACAGAATTTTTTATTTATCTGTGTTTTTTT TTAATTTGAATACATAGTTAATAAAGCCAAAGGACAATGAATTTAGTGCA GGGTGACTTTCTTAACCAAAATTTATCCCTCTTTTCAAAAACACAAACCA AAAATTTCTAGGCCTCGTAGTTTTTGTGATTTTTTACAAAGTGTTACCCC CTGTATATTTTAAACAGATTTCCAAAAGGACAAATAGATTTACGCACCCG AAATTCGGTTCGGTAAAATCCCGTGGACCAATCAGATCACGGTATTCGTT TTCCCGCCATTCCAAAAAGTATTTTTTTGAAGCGGCGGTAGTACAGTCAA GATTTTTCAGAGCTGTAGAAAGAGTGTCTCTTTACAGGCTTGCAGATCAA CTAACTTCTATAATTTTTTACATTGTTTTTACCTTCTACAAATTGTGTAC ATGGATACANAAACTTCTATAATTTTTTACATTGTTTTTACCTTTTACAA CTTGTGTACATGGATACATCAAAATATATTCTATAATCATATTGGGTTTG AAGTCTTCTATTGACGTGGTAAGTAAAAATCGATTTACTTTATATTCTTT TCTGGCTCTGGGGTATCCCTACTCGCTACTGTACTTTTGTTTTGTTTGCC TAAATAAACTCACCTGTTATCTTTTGACTGCAGTTATTTCAGCTGTTTGC CCTTTTTGATGTATAAGAGATTTGATTAACTAGGTAATATGTGCTTAGGA TTCTTGCAAATTAAATGAGAAATGATGTTGAACTATAATATAAACACAAA AAAATGCATCCTAATCCCAACCCAAAATGATACTAGACCAGGGTCAACCA AAGCATAACCAAGTAATGGTTTAAGCCTTGGAACTCGACTGACTAGGTTG ACCAATAATCATTTTGGGATACCCTTTTTTTTTTTAATTTTCAGAGCTTG ACTAAAACCGTGAAGTCGGCCTCGCCTCGGGTAACTTGCATTGCATCAGT GGAGGGAAACATGCATAGCCATCAAATGACAGGTCATTCAGATGAGGGCT ATGCATGTTAGCCTCCACTGATGCAAGTTAGCCGATCTCACTGTAATCAC TAAGGGGATCCATCCAAACTCATATTTTCCACAAACAAAAACGTTGATAT TGGGCGCTCAGAGGGGTGGGGGTGATGGCAGTTATGATGGAGGTTTACTC GTTTCCAAGAAATTTTCACTAGAAATAATAATTATAGAGAAGTTCTTTCC GTTCCAAATGTTACTTTGTCATTTCTGCTTTTTGTTCGCTTCAGCTTTTT TGAAAACCAAAACAAACGACCAATGTTTAAGTCTCTGGTTCTCTTATCTT GACGGGCTGCACGACTCTTGAGTTTTTGCAGACGGCCGGTTTGTTTTGCA GTGATATATATTACAGAGAGATTTCTGTGAAAAAGTTCAGAAATAAGCTT CTTTTTTTAAAAATGAACTACGGAAAATAAAGATGGCGGAGAAAACAGTG TTTGAATATTTACAGCAACAAAGCTGACAGAGGGTTGAATAAACGTAATT AAAGTTTTAATGCCACGATAACGTTAATCGAAGGGGGTTAGGGGAAGGTT GAATTTAGAACCACAACGATACACAATATGAGCCATAGGAAAAATTAAGA TGACTGATGAAACAATGAAGCGTAGAGTTAATTATCTTGAAATTAAGTTT AATTGCCATGCAACGTTATGGAAGGGATGGAAGGAGCTGTTTGAGTTTGG ATGGTGCCCCTAAGTAAACACAATTTTTTCCCAGAAAACTAGTAGAAAGA TTCCAGAAAAATAATCAGAATCTCAGTGTGGGAAGTGGCATCTTATTGTT GTATTATGTATTTTTACTTTTATCAGAACGATGGAATCTTCCCTGCTTGA TCCTTTGGCATGTGGCTTTGCTAAAGTTGCTGTTTTCAAGATGCTCATCG ATGATCCTAAGTCACTAAATTTGGCACACTTGTTCCTTAGGTGAATATCT GGGGTATTTTTTTCATTTTTTGAAAATTTTGATTTTTGGGGCCTGGGGAC AAGTTTTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGCCTGTAGACTTC AAAAATTGTTCGATTTGGCTGAAATTTTGCACACTTGTTCCTTGGCTGAA TTTTTGTAGAATTTTTTTCAATTTTTGAAAATTTTGATTTTTGGGGCCTG GGGACAAGTTTTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGCCTGTAG ACTTCAAAAATTGTTCGATTTGGCTGAAATTTTGCCCACTTGTTCCTTGG GTGAATATCTGGGGCTCTACAATTGGGCCTATGAATAGTTTGAAGGCACT GAAGTTGAGCCCAGTGCGTTGCGCACGTTCGACTATGTAAAAAACATAGA AATATAAGGAAAAAATCCAATGAAAATCTGTAAACACGGCGATTTCCGGC ATTTTCAACCGGAAAAAAAAATTCTCAAAAATCGAACTGGGCCATGTTTT GAGCGTTGCGAATACGCATCTTTCTGCAAAACGATGCTGTTTTGATCTAA AAATGCACAATGGTAAGCTGATGGTTGCTCTCCAGGTGATCATTACAGCT GCAAGAAAAAACGTAAACAGTATGGGGCCGAGAATATCCCCTTGCTTCAC GCCAATGGTACATGACATTATATGCGTGACTTCGTCTACGGTGAATTTAA AGGTGAAGTTTTCATGTAAGGATTTAAGAAGACTGGTTAATTTAGGTGGA ACTCCAAATTTCTCTAAGATAAGCCATGGTAACTGCCTGGGTGCGATCGA AAGCCTTGACTAGGTCAAGAAAAAATACCCAGGATTCTTTTCCGTGTTCT CGTCGTTTGTGAAGGGCTGTTTTAACTGTAAAAATGGCATCAATGCAGCC TCGATCAGGTCTAAACCCACATTGCGGTTCGTGGTCAAGATTTTCTTCGA TTGGTAATAGGCGAAAATGTAAAATGATTGCAATTATCTTGTAAGCAGTC TCAAGTAACATGATCCCACGATAATTCTTTGGTAAACCAAGATCGCCTTT CTTTGGTAGAATCGTCAAACGTCCTACATTCCAGTCATTAGGTATATTTT CAGTTTGCCAAATTGAAAGTATGATGTTGGTAAGAGCTTGACTGGTTCCT AGATGATCAATCAAACATTTCCATATTTGTGGTTGTATACCAGAGTCTCG TGGAGAAGTGTTCTTTAATTTTTGTATAGCTTTTCTGATTTCATCCTCAG TTGGATCATGGTCGCATCCTTGAACGATGTCGTGATGAGGGATGGGGTCG AGAACGGATACATTAAAGTTTTCTTCTCTATTGTAGAGATTGTTGAAATG TTCGTAAAAGACAGTTGCATTTTCTTGAGGAGTGGAACATAAGGTACCAT TTGGTTTTTTCATTTGTCGAGAAACTGAATGTTTTGGTTTTGAGAGTCCG TGATTAAGAGCTTTGAGGGATTCTCAAGCTGGTTTCGTACCATGATGACG ATTGAGTCTTGAACAGTGATTTAAAATCCAATCGTTTTTCGAAAATTATT ATTCGTTATTGAAAATTGAATTATGCTTGATGGTGGGCTATTAATAATGT TTTTGAATGAAAAAACAACCAATTATAAGGAAAAAATCCAATGAAAATCC ATCAAAAATCGAACTCGGCCATGTTTTGGGCATTGTTAATACGCAGAAAA TCAGAAAAAACTAATGATAAAATCTCGAGAAGATGCCAAAAAAACCCGTG AACAATCATTTCTGCATTACGTTTCATTCTTTTTACAATGTTTCTCGTCT TTTCTTCCCATTTTTGAAAAGTTTTTCCTGCCGAAGCCCTGTAACTGGCA ATACGAAAATGTTGTAATTTTCTCTCAACTGGACGGATTTGTATTTACAG ATAAAAAATGGCAGCGCTTCGCTTTTTTTTTATTATTCTCCGTTATTTGT ACGGAATGTAAAAATAGGTATTCATCGTTATAGGATCTGACGATTATATT TCATTTCTTGCATTTTAAGCGACCCACGTCTTCTTTCATCATCTGTACAT CCTAACGGTGTGCTAGTTCGAGATGAAGAAACTGCTTCGAAAAGATAGAA CTTTATGTCCGGATATACATTGAAAGAAAGGAAAAATTTTCAAAGTACGT ATAACCTTGAAAGATTGAAAGGGGAGGGGAATTAAAAAAATAGATTAGAT AGCCTAGATAGATTCTTCTCGGTATACCCCTCCACCTGGAAAGCCACGAA TAGATATCAAACAGAGTTACGAATATCAGAATAACGAAAATCAATCTTTT GGCCCAAGTTCCCAGAAAAAAATATATATGAGCAAAAGGTCAGGGGTATT AAAGCGACTGCGCTGATCTGACTGAATTGACGGAATAAAGAAAGGGTGCA GACGACAAAACTTCAATCTGATTCGGTAGAGGGCTAAAGTCTTAGAAAAG CTTTTCTTTAAAGAAAACAAGGCCATTTTTATATTCTTTGTACGAGTTTA AATACGAGTTCAAATGATTTCAAAATGAAAACGTTGGCTACGGGAGAGCT TCCCCTCCTTTAAATCCATTGACGAATATATACGAGTTTAGCATGGAAGG GGTTAAAAGGTACTTAAAAATAACCCATTGATTAGAATAAAAATGAATTA AATGCACTTAAGCACATTCTAAAAACATTATTCCAAAGTTCCCTCTCTGG TAACCCAACAAGTTCGTGATTTTAAATTCAAGGTCTATTTGAATGGATTC GATTAATAGAATTAATTAAAGGTAAAAAAAATTAAAGTAAATTTATGAAT TTAGATTTAATATACAAGCCTTTAAAAATGCTATAAAACTAATTTGCAAA ATTCAAACAAGATATTCGAGCTTATATAATATAAATGAAACCTAGCGTTA ATAACAAAACAAGAAGAAACCCTGAGAAGAAGATAATAATTTGTTTAAGT CATATGCTGATATTATGTTCTTCTGACATCTGCTAGCGAAAGTGTAATTG ATTTTTAAAATATTGTCATACTGTGCCTTGTAAAAGCTACGGTTTAGTCT TTTTTTTGTATTATCAAAATTTATGTAAACTTGATGTAACTTAAGATTGG ATTGAAAACACCTCAACGTTTTTCGACACTAAACCAAACATCGCCTTTGG GCAGTTGGGAGCGCGATTTGGGGTCTGGAATCAATTCATCCACAGTTTTC GAACACGGGATGATTTTATATTTACTCAACATGCGGGCCACCACAATTTT CACTTCCATGGTGGCAAAGCGTTGCGCAATACAATTTCTCGGACCGTGTC CGAAACCACCGGACGCGAACGGGTGTCTGCCGGCTTTCTTTTCGGCGCTG AAATTTTCAGGGTCAAAAACCTTCGGGTTGGAGAAATATTTCTCATCTTT TACAATACCAGTGACGGGAAAACGGACAACGATATCTTTCGGGATGACCA TTTCAGTTCCTGGAATTTTGTAATCGTTAACCGAAGCACGTTCCAAGTGG GTCAAAGGATACATTCTAAGACTCTCTTGGAAGAATTTCTCCATATACGG CATATTCATGATAGCAGCGTAGTTGAATTGATCAGAGCCTGTCGACTCGA TACTTTCTTTGATCTCTTGGTAAAGTTTCTCTTGGCAATCCTGGTTTTTA GCCAAGAAATACATCATCATGGAGGAAGTACTTGAAACAGTATCAAAACC AGCGATTAACATGATCAGGGAATTCGCGATGACGATTCTCTCGATTTCGT CTTTTTGTCGTTTCGTTTCTTCTGACTTTTCATTTGTCTTGATTTCTTCA TTTTCCTTCTGAAGGATATCGAGACAAGTATCAATAAAGTCATTGCGTCT CTCCCCACTCTCCTGGCGTTCTTTGATCGCCTTCCTAACAGCTGCAACAA AAAAACCCTCTCCTTTCTTGTCAAGAAGCGGCCAATCCAGTTTCCTCAAT AAACTTGGGAAAAACAAAAACATTAGGAAAGTCAAAAATAATTTGATACT CATTGTTTTGCCAACCATCAAGTCTGCGTTCGTCTTGAAGATGCTGTCAG TGTCATTGACGCTATCGCTCTCATAACCAAAACCTGTGCTTACAATCACA TCTAATGCATAGTTTCTCAATAATTCTTTGGCTTCAATTTCTTTCCCCAC ATTTTTCTCCAAAAAGACATCGCAGTGATCGGCAATTTCGTGTATGAGCG GAACCATGGCTTTTAGTTTCCCACTGGTAAAAACAGGTGTCAGTGAAGCT CGAACACTCTTCCATTGCTGGCCACGCAGTTCAGTTAGCATTACTGGTAA ATATCGGTTGTTCTTTGTGTGAGGATTGTAAGCGTTAGAAGAGGCCGGCT TTCTTTCCATGAATTGGTCGAAATCTTTCACCAAAACTTTCTTAGCAATA TCCAAGTCTCGAATCACGATGCTTGGACGACCAAATAATTCATACGTCCC AACAACAGGGGCATCTGGGTAATTCTTGTAAGCATGATCCGTCATTTGGA TGAAAGCGATTTTCTGCTTGAAGAAATCCCACAAATGTTGACTTCCAAAT GGAAAGGTTCCAGGATCGACAGGAACACCTCGACGCTGCCAAAATGTCAT CCTATGTCTGACATAGAAATAAAAGGCTGTAAAAGCCACGATAAACGCAG TTAACAATATCTGCCACCACATTACGCTAAATCTTCTTGCTTGTTGTGTA GCTCTTTTTACTGTTGGCAAAAGTTCTGTAAACTTTAAATTGTAAAGACT GTTATTAAAATGCAAGTTTTCTCATGCATCTGTTTATAAAGTTTCAAGAT TTGATGAAATCATCAAATTTCAAAACATGAAAGACTCTCCATCGTATTTA TTTTAACCTTTTTTAGAAGAAGGTTTTTGTTGACTGTTCCATAAAATTGA TTATTTCCTTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069959TCONS_00069959Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:209766..219328 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.01 0.18 0.03 0 0.26 0.09 0.42 0.71 1.22 2.03 12.21 1.13 7.12 3.1 4 6.76 2.02 1.64 11.52 6.98 0.22 0.84 1.04 4.55 10.05 16.19 1.59 1.11 39.01 19.51