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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069954 ID=TCONS_00069954|Name=TCONS_00069954|organism=Clytia hemisphaerica|type=transcript|length=850bp
CGTTCTTACAGTACCGAAGGAATAATCCTTCCTCGCcgatatttgatttt
cttccGACTTTATCTTCTTCTAGTCTTCACCCTTCAATGTTACCAATGCC
ATGCTGATGTTGGTTCGTCATGTGATCCTCGTGACAAAGTCTCATGTGCA
GCTAATGAAATATGTGTCACCAAAAGTTacaaagaactttttgaaggGGA
AGTCATACCAAACTTTGTGAAAGGATGTGGCAATGGTTGGGACAAATGTG
ATACAAAATGTGATGATGACACTTGGTATGATTGTAAGCAATCATGCTGT
AGAGGAAATTTATGTAACGAAGAAAGCAATGAGAAAGCTCTCTGGTACGC
GCTCTCATCGAAGAATACTTATAATAGTGGAAATGCTGTGAAGAGTAACA
TGTGCTTGCTGGTGGTTTCAGGTGTAATGCTGTTCGTATTCAAGCTTGGT
TTTATTTGAGTGGTGAAACAAGTCTTCAGACGGCTTTGAGTTGGAATCGC
CGTAGAGATCTGTATGGTTGTTTTTCAATCGTGTCATATTTACCTTTTCT
GCTCTGGTGAATCAAATGAAAAAGGAGCTTTCCTATCATTTGagtttttt
aataactttttaaatcgagaaaaatatcatctgaattttaaaatcttgta
aaatagcaaaaattgtttaaagagcattacaaaagaaaaactaatgtaaa
acaaaaatgtttcgtGCAATTATTATTCTTTTGATAGCCAAGCCTGGGGC
TCCGTGACATattttctacgacctagccatttttagtctattccaaagaa
cagtatattacaagatatttttgagagggaggacgcggattaggcccggg Run BLAST on NCBI transcript from alignment at scaffold_511:106312..107397- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069954 ID=TCONS_00069954|Name=TCONS_00069954|organism=Clytia hemisphaerica|type=transcript|length=1086bp|location=Sequence derived from alignment at scaffold_511:106312..107397- (Clytia hemisphaerica)
CGTTCTTACAGTACCGAAGGAATAATCCTTCCTCGCCGATATTTGATTTT
CTTCCGACTTTATCTTCTTCTAGTCTTCACCCTTCAATGTTACCAATGCC
ATGCTGATGTTGGTTCGTCATGTGATCCTCGTGACAAAGTCTCATGTGCA
GCTAATGAAATATGTGTCACCAAAAGTTACAAAGAACTTTTTGAAGGGGA
AGTCATACCAAACTTTGTGAAAGGATGTGGCAATGGTTGGGACAAATGTG
ATACAAAATGTGATGATGACACTTGGTATGATTGTAAGGTGAAACCATTT
TTTCTTTGATTCATTTATAGTTTACATGAAAGAAAAAGTAAATTCAATCA
TTTAGTGAAGTATTGTTTGTATTGTAAGGTAATACCTTTTGTTTTTTCTT
CAATCATAGTGAAGTTTTCTGCGAATAAAATTTCTGTCACTAAAACATAT
GCACAGCACTATATACAGTAAAAAAAAAATAAAGTGAACTCTGAAATTCA
CATCTAAATTCATCCTTTTCTTAGCAATCATGCTGTAGAGGAAATTTATG
TAACGAAGAAAGCAATGAGAAAGCTCTCTGGTACGCGCTCTCATCGAAGA
ATACTTATAATAGTGGAAATGCTGTGAAGAGTAACATGTGCTTGCTGGTG
GTTTCAGGTGTAATGCTGTTCGTATTCAAGCTTGGTTTTATTTGAGTGGT
GAAACAAGTCTTCAGACGGCTTTGAGTTGGAATCGCCGTAGAGATCTGTA
TGGTTGTTTTTCAATCGTGTCATATTTACCTTTTCTGCTCTGGTGAATCA
AATGAAAAAGGAGCTTTCCTATCATTTGAGTTTTTTAATAACTTTTTAAA
TCGAGAAAAATATCATCTGAATTTTAAAATCTTGTAAAATAGCAAAAATT
GTTTAAAGAGCATTACAAAAGAAAAACTAATGTAAAACAAAAATGTTTCG
TGCAATTATTATTCTTTTGATAGCCAAGCCTGGGGCTCCGTGACATATTT
TCTACGACCTAGCCATTTTTAGTCTATTCCAAAGAACAGTATATTACAAG
ATATTTTTGAGAGGGAGGACGCGGATTAGGCCCGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069954-exon-scaffold_511-1575043694:107110..107397 | TCONS_00069954-exon-scaffold_511-1575043694:107110..107397 | Clytia hemisphaerica | exon |
| TCONS_00069954-exon-scaffold_511-1575043694:106312..106873 | TCONS_00069954-exon-scaffold_511-1575043694:106312..106873 | Clytia hemisphaerica | exon |
| TCONS_00069954-exon-scaffold_511-1510915933:107110..107397 | TCONS_00069954-exon-scaffold_511-1510915933:107110..107397 | Clytia hemisphaerica | exon |
| TCONS_00069954-exon-scaffold_511-1510915933:106312..106873 | TCONS_00069954-exon-scaffold_511-1510915933:106312..106873 | Clytia hemisphaerica | exon |
| TCONS_00069954-exon-scaffold_511-1491911889:107110..107397 | TCONS_00069954-exon-scaffold_511-1491911889:107110..107397 | Clytia hemisphaerica | exon |
| TCONS_00069954-exon-scaffold_511-1491911889:106312..106873 | TCONS_00069954-exon-scaffold_511-1491911889:106312..106873 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_511 | supercontig | scaffold_511:106312..107397 - |
Blast
The following BLAST results are available for this feature:
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