TCONS_00069858 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069858
Unique NameTCONS_00069858
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length273

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069858 ID=TCONS_00069858|Name=TCONS_00069858|organism=Clytia hemisphaerica|type=transcript|length=273bp
ATACACTCGACCAACTACAAAGATTTCAAGATTGGAGCTGGAATCAACCA
GCTGCTGAAGTCAACCAACCAATGTTTGCGTTCATACTTTTTAACTTGTG
TGCTTCCTGGGCACGAAGAAAGAAGATCCATCAACTCTACACTCTCCAAC
TGTCAACTCTACgacaaaataaaagaatgaCATAACCAACGTATTGGTAT
TCATTAAATTTGAACCTACTTCCACGGAACATTACATTGAACTCACGTAA
TGAAATGTATTGATTACACCTGA
Run BLAST on NCBI

transcript from alignment at scaffold_51:250941..251213

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069858 ID=TCONS_00069858|Name=TCONS_00069858|organism=Clytia hemisphaerica|type=transcript|length=273bp|location=Sequence derived from alignment at scaffold_51:250941..251213 (Clytia hemisphaerica)
TCAGGTGTAATCAATACATTTCATTACGTGAGTTCAATGTAATGTTCCGT
GGAAGTAGGTTCAAATTTAATGAATACCAATACGTTGGTTATGtcattct
tttattttgtcGTAGAGTTGACAGTTGGAGAGTGTAGAGTTGATGGATCT
TCTTTCTTCGTGCCCAGGAAGCACACAAGTTAAAAAGTATGAACGCAAAC
ATTGGTTGGTTGACTTCAGCAGCTGGTTGATTCCAGCTCCAATCTTGAAA
TCTTTGTAGTTGGTCGAGTGTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043507XLOC_043507Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069858-exon-scaffold_51-1491911889:250941..251213TCONS_00069858-exon-scaffold_51-1491911889:250941..251213Clytia hemisphaericaexon
TCONS_00069858-exon-scaffold_51-1510915933:250941..251213TCONS_00069858-exon-scaffold_51-1510915933:250941..251213Clytia hemisphaericaexon
TCONS_00069858-exon-scaffold_51-1575043694:250941..251213TCONS_00069858-exon-scaffold_51-1575043694:250941..251213Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_51supercontigscaffold_51:250941..251213 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.87778	3.0497	0.615195	0.601872	7.2596	3.47404	2.79418	3.81097	0	2.83567	1.10095	1.44744	0.957224	0.750545	0.308525	0.877061	2.03941	0.418065	0	0.604396	0	0.768712	1.24596	0	0.583357	0	2.10135	0.442352	0.603062	0.614425
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069858 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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