TCONS_00069849 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069849
Unique NameTCONS_00069849
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length295

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069849 ID=TCONS_00069849|Name=TCONS_00069849|organism=Clytia hemisphaerica|type=transcript|length=295bp
TTGCAAGCTTCTGAAATCAACAATCTGGAGGACTTAACTTTTGATACTGT
GAAAAACTGGATTAAATGGAGGCAACGCAAAAGCACAATTTTAGAACAGA
TACCCCCATCTAATCTCTCATCTTTTTAGCTTTATTTTTTAGTCCAATTA
GTTATTTAAGGCTATTTTGCAGGGATTCACCATAGAGTTAGAATTTTAAC
TTCTTAGAAGATAATTGCGAAAAACTCTTTAAAAGCTTCAATGCCAATGG
AATATTTTCACTGTGATTTATGACTCACATGTTGATAATTCAAAC
Run BLAST on NCBI

transcript from alignment at scaffold_51:125915..126209

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069849 ID=TCONS_00069849|Name=TCONS_00069849|organism=Clytia hemisphaerica|type=transcript|length=295bp|location=Sequence derived from alignment at scaffold_51:125915..126209 (Clytia hemisphaerica)
GTTTGAATTATCAACATGTGAGTCATAAATCACAGTGAAAATATTCCATT
GGCATTGAAGCTTTTAAAGAGTTTTTCGCAATTATCTTCTAAGAAGTTAA
AATTCTAACTCTATGGTGAATCCCTGCAAAATAGCCTTAAATAACTAATT
GGACTAAAAAATAAAGCTAAAAAGATGAGAGATTAGATGGGGGTATCTGT
TCTAAAATTGTGCTTTTGCGTTGCCTCCATTTAATCCAGTTTTTCACAGT
ATCAAAAGTTAAGTCCTCCAGATTGTTGATTTCAGAAGCTTGCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043498XLOC_043498Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069849-exon-scaffold_51-1491911889:125915..126209TCONS_00069849-exon-scaffold_51-1491911889:125915..126209Clytia hemisphaericaexon
TCONS_00069849-exon-scaffold_51-1510915933:125915..126209TCONS_00069849-exon-scaffold_51-1510915933:125915..126209Clytia hemisphaericaexon
TCONS_00069849-exon-scaffold_51-1575043694:125915..126209TCONS_00069849-exon-scaffold_51-1575043694:125915..126209Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_51supercontigscaffold_51:125915..126209 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.23463	0.40132	1.39791	0	2.21996	1.31568	1.05821	1.98136	4.1616	2.5774	0.416949	0.822257	1.91593	0	1.63582	2.00626	0.617888	1.58329	0	0	2.38742	1.1645	0	1.71598	0.441856	0	0	0	0.913562	0.930775
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069849 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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