TCONS_00069848 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069848
Unique NameTCONS_00069848
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length166

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069848 ID=TCONS_00069848|Name=TCONS_00069848|organism=Clytia hemisphaerica|type=transcript|length=166bp
CAGTGTCTCTCAATGATTTACTGTCTGTTATACAAACAGTCGGAAATGTT
GATTGTTCTGAATCATAAATCTCACAGAGTAGTGCTTTAATTAATGCTGC
GTGTTCTACTGCTTCCTGTAGCGCAAGAGTCTCGGCAGCAAGTGGACTTT
TCACAACACGTTTTAC
Run BLAST on NCBI

transcript from alignment at scaffold_51:52938..53103

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069848 ID=TCONS_00069848|Name=TCONS_00069848|organism=Clytia hemisphaerica|type=transcript|length=166bp|location=Sequence derived from alignment at scaffold_51:52938..53103 (Clytia hemisphaerica)
GTAAAACGTGTTGTGAAAAGTCCACTTGCTGCCGAGACTCTTGCGCTACA
GGAAGCAGTAGAACACGCAGCATTAATTAAAGCACTACTCTGTGAGATTT
ATGATTCAGAACAATCAACATTTCCGACTGTTTGTATAACAGACAGTAAA
TCATTGAGAGACACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043497XLOC_043497Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069848-exon-scaffold_51-1491911889:52938..53103TCONS_00069848-exon-scaffold_51-1491911889:52938..53103Clytia hemisphaericaexon
TCONS_00069848-exon-scaffold_51-1510915933:52938..53103TCONS_00069848-exon-scaffold_51-1510915933:52938..53103Clytia hemisphaericaexon
TCONS_00069848-exon-scaffold_51-1575043694:52938..53103TCONS_00069848-exon-scaffold_51-1575043694:52938..53103Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_51supercontigscaffold_51:52938..53103 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069848 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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