TCONS_00069836 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069836
Unique NameTCONS_00069836
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3813

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069836 ID=TCONS_00069836|Name=TCONS_00069836|organism=Clytia hemisphaerica|type=transcript|length=3813bp
AAAATATGGTCATATTATATACCTTTGGATCAGAAATTCGATCTAGATTG
GAAAAAAGGATAATCCTATATCACTAAAATCAAGTGTATTGAGGCTATTT
TTCTTCAGAGTGATGCTTTCATTTGATGTTTTTGCTAAGAGATCATTGTG
TCCTCTAATTGTGGTCAGGCTAAGTCATTGAATTATAAATTTACATTCTT
TCTTTGTTCATTTGTTAGACTGATTACTTactttgcttttttcttttaga
tgtttactaaataatttgaaaaataaaatgaaataggtaattgccaaaaa
tgtcaaaaagaagAAGTGTTGTGACGGTTGATGTAGGAAAGGATCCTAAA
ACTATTAAGAGCGATCAAGATAACGAAAAGATTGATTGGACCCGCTGCTT
TATATGTCAAAAAGATGAAGCAGAGCATCTTCAAGCAACTTCAGATGCGA
AAACTGGAGACAAAGAACGACCTTACAGGGAACTTGCTAAAGGCATAATA
AAATTCAAAAGCATTGATTTACTACCAGTTTCGCTAGACATTCAAAAGTT
GGAGCAAGGAGAATTATCACTTGAAAAGACGCTTTAATCAGACACAGAGA
AAGTTTCACAAGTCATGCAAGAACAAATTTGGGGCAGATAAGCTTGAAAG
AGCCATAAAGAAATACGAGAAATCAAGACATAGTGAGATAGGCTCTCGTC
TCCGAAACTCTCAATCGTCTaattcaaaatcatcaaaaacatccaAATGC
TTCTTTTGTGGAGAAGAAGAGAGTTTTGAAAAAGGCTCGTTGCATTTAGT
GCAGTCCTACAGGCTTGATAATCGAGTTCGTACATGTGCTAGTCTTCTTG
GAGATACCGATCTTTATGCCAAACTCCAAAACGGTGATATGATCGCACAA
GACGCCCTGTATCACAAATCATGTTTACTCAAATTGTACAAAAGAGCTTC
AAGCAAACAATTCGGAGACGAAACGTCAGAGGAGCAACGGAGACTGAGTG
GTATCGCGTTTGGCGAAGTTGTTGCTTTTATTGAAGAAACCATGTTAGAA
TTGATAGAAACTGCAAATATCCCTACGTTTAAGCTGTCAGATCTCATCAA
GCTGTATACTGCAAACCTTGAGAAACTTGGCGTCACGCTTGAAACAAGAG
AACACAGCACACGATTCAAAAAGAGACTGCTCAATCAATTTGAGGATCTA
ACTGCTTACAATGACGGAAAAGAAGTCATTCTAGTATTCAATAAAAATGT
TGGAGAGGCATTATCGGTAGCTGCAGAAACCAATTACGATGAAGACGGGT
ATATCCTTGCAAAGGCGGCAAATATCATGCGCAGGGACATATTGAACTCg
gagcattttcaatttcacGGGGACTTCAAACCAGGATGccaagaatcttc
aataccacCAGCTTTAAAATCCTTCATGTCATATTTAATACACAGTTCAA
CTGAGACACCAGGAAACAATGAGCATTACAAACAAGCTGTACTAACCCTC
TGTCAATTAGTAACTTTTAACACTTTGATCCGCACTCGTAAGGAGTCGAC
ATCCTCGTATCATTCAGTCAACAGAGAACCAGCATTGTGCGTGTTTCTGG
CAATGATGATTCACAATAAAACCAGAAATTTGGACATGGTGGAGACCGTA
TCAAAGCTTGGTTTATGCATTAGCAAGCACCGGTTATCAAACCTCTCTAT
TGCAATGGGAAACAAAGTAATAGAACTGAATGAATTTGACAGGGTTGTAT
TGCCTACCAGCTTAATGCTTGGTATTTTCTCAACGGCATCCATTGACAAT
CTAGATATTGCAATTAAATCAGCATTAGCTACAACATCTTTCCATGGGAC
TGCGGCTTCTATCAATCAACATCCTAAAGCCATTGGTCAAGGTTTTCCGA
GGAAAGCTCCTAGAGTTGAAAAAATTCAGTCCGAGACACTGAAGAATCTC
CCAACATCATATACTGACGTACCTCCTTTTGATTTGCCAAGTGAAGTTAA
ACCTCCTGCATTTAAAAAGTCTAATGTTCCAAAACAAGACTCGGTGGCTG
ATCAAACGAAAGACAAGAAATGGTTAGAGAATCCAGAACAGTTATCATGG
GCAGTCTATCATTCAAAAGAACGAAACCCAGCAACCTGTAAAGATATCTC
AGCAATGTTGCCAATTTTTCGTGATGATTCAAAGTCGCCAGCTACAATCA
AACATCTACTCAATGTTCTCATTCATTCTATCAGCTTCTTAAATCCAGGT
CAACCTGCTGTTATTGGGCTCGACCAACCGCTATTTGCACTTGCTAAAAG
GATTCAATGGTATCAGCCATCATTATATGGTGAAAAGAAGCTGGTGTTGA
TGCTCGGAGCACTTCACATTGAAATGGTCATGTTGAGTTGTTTGGGTGAT
TGGCTTGAGGATAGTGGCTGGACTATTGTCGTCTCCAACAGTGGTATCTC
GTCATCTGGAAATGACTCCTTATTAACTGGCCACGATGTTGCCCAAACAA
AATATGTGCATCAAGTAACTGCTATGGCCTTGCATCGCCTAATGAAATCA
GCATATGACAACAGGACACCAAAAAATGCGaacacttttgaaatttggag
aGCCGAGATGGAAAAAGAGAACCCACAGttcaaattttggtcaattgcTT
TGAAGATGGAAATGGATTATCTTACGTTTCTACGCTCCATTCGGTCTGCT
GATTTCAAACTCTACGTCGCatcattaaaaaagtttttgccaTGGATCTT
CCTCTTCGACCATGTCCATTATGCTCGTTGGCTAACCATTCATCATCACG
ACATGGAAGTTTTGAAAGACACAAATCCTCAAGTATACGAAGAGTTTGTG
ACAAACGGAAACTTCGTTGTGAACAGAACTCAAAACCGCTTCTCTAGCAT
GGGTCTGGATCAACGCCATGAACAACTGAACAAAGATGTCAAAGGTTTGT
ATAAAGTATCAAAATTTTAAGGACCTTTTTGGTGCTATGTTTAAGTACGA
CACATTTAGTTTTTTTCACCTCGCTAAAgtgattttgaatttatttaaaa
tttgattGAATATAAAGGGTTTTGAAAAATGGGCAAAGTACTCTATTCTC
TTTAATCCAGGAAGCGGCGGGTTAGTTGGTTTGACAGAAGATGAGGACAA
GTTTCGACGCTGGCAGATTTGTAGTCCAGAAGTGGCTCGAGCAGTCTCAG
AATTTGAGGAGATTACAGTCCTTAAAGAAAACGAGCATTCCGTTTATAAT
CACCACGAAGATTCAGAAGCGTTCAAGAAAAAGTTTCGAACGGATGTTGA
CAAGCTTTCCACTGAAATAACGCAACTGGGAAACCCTTTCAACAGCACAA
GTTGTGACGATTCCAAGGAGCTGATTCAATTAGGAAATAAAGATGTGATG
AATGAGGAAACagcaaagaaagtttttgaagtTGAGAAGATTGGAAAAGA
CCAGTTTGAGGAGTTTCAAACCACAAGAATTTTCAGTCAAACAACATCGA
TTGATTCTCCCATTACAAAAANATGACTCCTTATTAACTGGCCACGATGT
TGCCCAAACAAAATATGTGCATCAAGTAACTGCTATGGCCTTGCATCGCC
TAATGAAATCAGCATATGACAACAGGACACCAAAAAATGCGaacactttt
gaaatttggagaGCCGAGATGGAAAAAGAGAACCCACAGttcaaattttg
gtcaattgcTTTGAAGATGGAAATGGATTATCTTACGTTTCTACGCTCCA
TTCGGTCTGCTGATTTCAAACTCTACGTCGCatcattaaaaaagtttttg
ccaTGGATCTTCC
Run BLAST on NCBI

protein sequence of TCONS_00069836-protein

>TCONS_00069836-protein ID=TCONS_00069836-protein|Name=TCONS_00069836-protein|organism=Clytia hemisphaerica|type=polypeptide|length=693bp
MIAQDALYHKSCLLKLYKRASSKQFGDETSEEQRRLSGIAFGEVVAFIEE
TMLELIETANIPTFKLSDLIKLYTANLEKLGVTLETREHSTRFKKRLLNQ
FEDLTAYNDGKEVILVFNKNVGEALSVAAETNYDEDGYILAKAANIMRRD
ILNSEHFQFHGDFKPGCQESSIPPALKSFMSYLIHSSTETPGNNEHYKQA
VLTLCQLVTFNTLIRTRKESTSSYHSVNREPALCVFLAMMIHNKTRNLDM
VETVSKLGLCISKHRLSNLSIAMGNKVIELNEFDRVVLPTSLMLGIFSTA
SIDNLDIAIKSALATTSFHGTAASINQHPKAIGQGFPRKAPRVEKIQSET
LKNLPTSYTDVPPFDLPSEVKPPAFKKSNVPKQDSVADQTKDKKWLENPE
QLSWAVYHSKERNPATCKDISAMLPIFRDDSKSPATIKHLLNVLIHSISF
LNPGQPAVIGLDQPLFALAKRIQWYQPSLYGEKKLVLMLGALHIEMVMLS
CLGDWLEDSGWTIVVSNSGISSSGNDSLLTGHDVAQTKYVHQVTAMALHR
LMKSAYDNRTPKNANTFEIWRAEMEKENPQFKFWSIALKMEMDYLTFLRS
IRSADFKLYVASLKKFLPWIFLFDHVHYARWLTIHHHDMEVLKDTNPQVY
EEFVTNGNFVVNRTQNRFSSMGLDQRHEQLNKDVKGLYKVSKF
Run BLAST on NCBI

transcript from alignment at scaffold_51:174932..179077+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069836 ID=TCONS_00069836|Name=TCONS_00069836|organism=Clytia hemisphaerica|type=transcript|length=4146bp|location=Sequence derived from alignment at scaffold_51:174932..179077+ (Clytia hemisphaerica)
AAAATATGGTCATATTATATACCTTTGGATCAGAAATTCGATCTAGATTG GAAAAAAGGATAATCCTATATCACTAAAATCAAGTGTATTGAGGCTATTT TTCTTCAGAGTGATGCTTTCATTTGATGTTTTTGCTAAGAGATCATTGTG TCCTCTAATTGTGGTCAGGCTAAGTCATTGAATTATAAATTTACATTCTT TCTTTGTTCATTTGTTAGACTGATTACTTactttgcttttttcttttaga tgtttactaaataatttgaaaaataaaatgaaataggtaattgccaaaaa tgtcaaaaagaagAAGTGTTGTGACGGTTGATGTAGGAAAGGATCCTAAA ACTATTAAGAGCGATCAAGATAACGAAAAGATTGATTGGACCCGCTGCTT TATATGTCAAAAAGATGAAGCAGAGCATCTTCAAGCAACTTCAGATGCGA AAACTGGAGACAAAGAACGACCTTACAGGGAACTTGCTAAAGGCATAATA AAATTCAAAAGCATTGATTTACTACCAGTTTCGCTAGACATTCAAAAGTT GGAGCAAGGAGAATTATCACTTGAAAAGACGCTTTAATCAGACACAGAGA AAGTTTCACAAGTCATGCAAGAACAAATTTGGGGCAGATAAGCTTGAAAG AGCCATAAAGAAATACGAGAAATCAAGACATAGTGAGATAGGTACTTATG AATACACATCATTCATATAATTTAAGTTTAAGACTCTGGATAGAGTAGTC AACTAATTTTTTGTCTGATAGGATAATCCATAACGAGTTTTTAGACTATA ACAGGAGTGTCAAACTTTATTATTAATgactgtttgtttttgtttttcgt cAAGTGATGTGGATTTATTCTTATCTTAGGCTCTCGTCTCCGAAACTCTC AATCGTCTaattcaaaatcatcaaaaacatccaAATGCTTCTTTTGTGGA GAAGAAGAGAGTTTTGAAAAAGGCTCGTTGCATTTAGTGCAGTCCTACAG GCTTGATAATCGAGTTCGTACATGTGCTAGTCTTCTTGGAGATACCGATC TTTATGCCAAACTCCAAAACGGTGATATGATCGCACAAGACGCCCTGTAT CACAAATCATGTTTACTCAAATTGTACAAAAGAGCTTCAAGCAAACAATT CGGAGACGAAACGTCAGAGGAGCAACGGAGACTGAGTGGTATCGCGTTTG GCGAAGTTGTTGCTTTTATTGAAGAAACCATGTTAGAATTGATAGAAACT GCAAATATCCCTACGTTTAAGCTGTCAGATCTCATCAAGCTGTATACTGC AAACCTTGAGAAACTTGGCGTCACGCTTGAAACAAGAGAACACAGCACAC GATTCAAAAAGAGACTGCTCAATCAATTTGAGGATCTAACTGCTTACAAT GACGGAAAAGAAGTCATTCTAGTATTCAATAAAAATGTTGGAGAGGCATT ATCGGTAGCTGCAGAAACCAATTACGATGAAGACGGGTATATCCTTGCAA AGGCGGCAAATATCATGCGCAGGTTAATCTGGTTTCAAGCTATTAAATTC TTTCTTATATTAAACTTTCTATGTCAATGGGCTCCATCTTTACCTTGttt atttgattgaaaaaatgaCCACTAACAACTTTCCATTCTAAATTTTGCTA CTCGTTTTCCTTCACAGGGACATATTGAACTCggagcattttcaatttca cGGGGACTTCAAACCAGGATGccaagaatcttcaataccacCAGCTTTAA AATCCTTCATGTCATATTTAATACACAGTTCAACTGAGACACCAGGAAAC AATGAGCATTACAAACAAGCTGTACTAACCCTCTGTCAATTAGTAACTTT TAACACTTTGATCCGCACTCGTAAGGAGTCGACATCCTCGTATCATTCAG TCAACAGAGAACCAGCATTGTGCGTGTTTCTGGCAATGATGATTCACAAT AAAACCAGAAATTTGGACATGGTGGAGACCGTATCAAAGCTTGGTTTATG CATTAGCAAGCACCGGTTATCAAACCTCTCTATTGCAATGGGAAACAAAG TAATAGAACTGAATGAATTTGACAGGGTTGTATTGCCTACCAGCTTAATG CTTGGTATTTTCTCAACGGCATCCATTGACAATCTAGATATTGCAATTAA ATCAGCATTAGCTACAACATCTTTCCATGGGACTGCGGCTTCTATCAATC AACATCCTAAAGCCATTGGTCAAGGTTTTCCGAGGAAAGCTCCTAGAGTT GAAAAAATTCAGTCCGAGACACTGAAGAATCTCCCAACATCATATACTGA CGTACCTCCTTTTGATTTGCCAAGTGAAGTTAAACCTCCTGCATTTAAAA AGTCTAATGTTCCAAAACAAGACTCGGTGGCTGATCAAACGAAAGACAAG AAATGGTTAGAGAATCCAGAACAGTTATCATGGGCAGTCTATCATTCAAA AGAACGAAACCCAGCAACCTGTAAAGATATCTCAGCAATGTTGCCAATTT TTCGTGATGATTCAAAGTCGCCAGCTACAATCAAACATCTACTCAATGTT CTCATTCATTCTATCAGCTTCTTAAATCCAGGTCAACCTGCTGTTATTGG GCTCGACCAACCGCTATTTGCACTTGCTAAAAGGATTCAATGGTATCAGC CATCATTATATGGTGAAAAGAAGCTGGTGTTGATGCTCGGAGCACTTCAC ATTGAAATGGTCATGTTGAGTTGTTTGGGTGATTGGCTTGAGGATAGTGG CTGGACTATTGTCGTCTCCAACAGTGGTATCTCGTCATCTGGAAATGACT CCTTATTAACTGGCCACGATGTTGCCCAAACAAAATATGTGCATCAAGTA ACTGCTATGGCCTTGCATCGCCTAATGAAATCAGCATATGACAACAGGAC ACCAAAAAATGCGaacacttttgaaatttggagaGCCGAGATGGAAAAAG AGAACCCACAGttcaaattttggtcaattgcTTTGAAGATGGAAATGGAT TATCTTACGTTTCTACGCTCCATTCGGTCTGCTGATTTCAAACTCTACGT CGCatcattaaaaaagtttttgccaTGGATCTTCCTCTTCGACCATGTCC ATTATGCTCGTTGGCTAACCATTCATCATCACGACATGGAAGTTTTGAAA GACACAAATCCTCAAGTATACGAAGAGTTTGTGACAAACGGAAACTTCGT TGTGAACAGAACTCAAAACCGCTTCTCTAGCATGGGTCTGGATCAACGCC ATGAACAACTGAACAAAGATGTCAAAGGTTTGTATAAAGTATCAAAATTT TAAGGACCTTTTTGGTGCTATGTTTAAGTACGACACATTTAGTTTTTTTC ACCTCGCTAAAgtgattttgaatttatttaaaatttgattGAATATAAAG GGTTTTGAAAAATGGGCAAAGTACTCTATTCTCTTTAATCCAGGAAGCGG CGGGTTAGTTGGTTTGACAGAAGATGAGGACAAGTTTCGACGCTGGCAGA TTTGTAGTCCAGAAGTGGCTCGAGCAGTCTCAGAATTTGAGGAGATTACA GTCCTTAAAGAAAACGAGCATTCCGTTTATAATCACCACGAAGATTCAGA AGCGTTCAAGAAAAAGTTTCGAACGGATGTTGACAAGCTTTCCACTGAAA TAACGCAACTGGGAAACCCTTTCAACAGCACAAGTTGTGACGATTCCAAG GAGCTGATTCAATTAGGAAATAAAGATGTGATGAATGAGGAAACagcaaa gaaagtttttgaagtTGAGAAGATTGGAAAAGACCAGTTTGAGGAGTTTC AAACCACAAGAATTTTCAGTCAAACAACATCGATTGATTCTCCCATTACA AAAANATGACTCCTTATTAACTGGCCACGATGTTGCCCAAACAAAATATG TGCATCAAGTAACTGCTATGGCCTTGCATCGCCTAATGAAATCAGCATAT GACAACAGGACACCAAAAAATGCGaacacttttgaaatttggagaGCCGA GATGGAAAAAGAGAACCCACAGttcaaattttggtcaattgcTTTGAAGA TGGAAATGGATTATCTTACGTTTCTACGCTCCATTCGGTCTGCTGATTTC AAACTCTACGTCGCatcattaaaaaagtttttgccaTGGATCTTCC

Coding sequence (CDS) from alignment at scaffold_51:174932..179077+

>TCONS_00069836 ID=TCONS_00069836|Name=TCONS_00069836|organism=Clytia hemisphaerica|type=CDS|length=4164bp|location=Sequence derived from alignment at scaffold_51:174932..179077+ (Clytia hemisphaerica)
ATGATCGCACAAGACGCCCTGTATCACAAATCATGTTTACTCAAATTGTA
CAAAAGAGCTTCAAGCAAACAATTCGGAGACGAAACGTCAGAGGAGCAAC
GGAGACTGAGTGGTATCGCGTTTGGCGAAGTTGTTGCTTTTATTGAAGAA
ACCATGTTAGAATTGATAGAAACTGCAAATATCCCTACGTTTAAGCTGTC
AGATCTCATCAAGCTGTATACTGCAAACCTTGAGAAACTTGGCGTCACGC
TTGAAACAAGAGAACACAGCACACGATTCAAAAAGAGACTGCTCAATCAA
TTTGAGGATCTAACTGCTTACAATGACGGAAAAGAAGTCATTCTAGTATT
CAATAAAAATGTTGGAGAGGCATTATCGGTAGCTGCAGAAACCAATTACG
ATGAAGACGGGTATATCCTTGCAAAGGCGGCAAATATCATGCGCAGGGAC
ATATTGAACTCggagcattttcaatttcacGGGGACTTCAAACCAGGATG
ccaagaatcttcaataccacCAGCTTTAAAATCCTTCATGTCATATTTAA
TACACAGTTCAACTGAGACACCAGGAAACAATGAGCATTACAAACAAGCT
GTACTAACCCTCTGTCAATTAGTAACTTTTAACACTTTGATCCGCACTCG
TAAGGAGTCGACATCCTCGTATCATTCAGTCAACAGAGAACCAGCATTGT
GCGTGTTTCTGGCAATGATGATTCACAATAAAACCAGAAATTTGGACATG
GTGGAGACCGTATCAAAGCTTGGTTTATGCATTAGCAAGCACCGGTTATC
AAACCTCTCTATTGCAATGGGAAACAAAGTAATAGAACTGAATGAATTTG
ACAGGGTTGTATTGCCTACCAGCTTAATGCTTGGTATTTTCTCAACGGCA
TCCATTGACAATCTAGATATTGCAATTAAATCAGCATTAGCTACAACATC
TTTCCATGGGACTGCGGCTTCTATCAATCAACATCCTAAAGCCATTGGTC
AAGGTTTTCCGAGGAAAGCTCCTAGAGTTGAAAAAATTCAGTCCGAGACA
CTGAAGAATCTCCCAACATCATATACTGACGTACCTCCTTTTGATTTGCC
AAGTGAAGTTAAACCTCCTGCATTTAAAAAGTCTAATGTTCCAAAACAAG
ACTCGGTGGCTGATCAAACGAAAGACAAGAAATGGTTAGAGAATCCAGAA
CAGTTATCATGGGCAGTCTATCATTCAAAAGAACGAAACCCAGCAACCTG
TAAAGATATCTCAGCAATGTTGCCAATTTTTCGTGATGATTCAAAGTCGC
CAGCTACAATCAAACATCTACTCAATGTTCTCATTCATTCTATCAGCTTC
TTAAATCCAGGTCAACCTGCTGTTATTGGGCTCGACCAACCGCTATTTGC
ACTTGCTAAAAGGATTCAATGGTATCAGCCATCATTATATGGTGAAAAGA
AGCTGGTGTTGATGCTCGGAGCACTTCACATTGAAATGGTCATGTTGAGT
TGTTTGGGTGATTGGCTTGAGGATAGTGGCTGGACTATTGTCGTCTCCAA
CAGTGGTATCTCGTCATCTGGAAATGACTCCTTATTAACTGGCCACGATG
TTGCCCAAACAAAATATGTGCATCAAGTAACTGCTATGGCCTTGCATCGC
CTAATGAAATCAGCATATGACAACAGGACACCAAAAAATGCGaacacttt
tgaaatttggagaGCCGAGATGGAAAAAGAGAACCCACAGttcaaatttt
ggtcaattgcTTTGAAGATGGAAATGGATTATCTTACGTTTCTACGCTCC
ATTCGGTCTGCTGATTTCAAACTCTACGTCGCatcattaaaaaagttttt
gccaTGGATCTTCCTCTTCGACCATGTCCATTATGCTCGTTGGCTAACCA
TTCATCATCACGACATGGAAGTTTTGAAAGACACAAATCCTCAAGTATAC
GAAGAGTTTGTGACAAACGGAAACTTCGTTGTGAACAGAACTCAAAACCG
CTTCTCTAGCATGGGTCTGGATCAACGCCATGAACAACTGAACAAAGATG
TCAAAGGTTTGTATAAAGTATCAAAATTTTAAATGATCGCACAAGACGCC
CTGTATCACAAATCATGTTTACTCAAATTGTACAAAAGAGCTTCAAGCAA
ACAATTCGGAGACGAAACGTCAGAGGAGCAACGGAGACTGAGTGGTATCG
CGTTTGGCGAAGTTGTTGCTTTTATTGAAGAAACCATGTTAGAATTGATA
GAAACTGCAAATATCCCTACGTTTAAGCTGTCAGATCTCATCAAGCTGTA
TACTGCAAACCTTGAGAAACTTGGCGTCACGCTTGAAACAAGAGAACACA
GCACACGATTCAAAAAGAGACTGCTCAATCAATTTGAGGATCTAACTGCT
TACAATGACGGAAAAGAAGTCATTCTAGTATTCAATAAAAATGTTGGAGA
GGCATTATCGGTAGCTGCAGAAACCAATTACGATGAAGACGGGTATATCC
TTGCAAAGGCGGCAAATATCATGCGCAGGGACATATTGAACTCggagcat
tttcaatttcacGGGGACTTCAAACCAGGATGccaagaatcttcaatacc
acCAGCTTTAAAATCCTTCATGTCATATTTAATACACAGTTCAACTGAGA
CACCAGGAAACAATGAGCATTACAAACAAGCTGTACTAACCCTCTGTCAA
TTAGTAACTTTTAACACTTTGATCCGCACTCGTAAGGAGTCGACATCCTC
GTATCATTCAGTCAACAGAGAACCAGCATTGTGCGTGTTTCTGGCAATGA
TGATTCACAATAAAACCAGAAATTTGGACATGGTGGAGACCGTATCAAAG
CTTGGTTTATGCATTAGCAAGCACCGGTTATCAAACCTCTCTATTGCAAT
GGGAAACAAAGTAATAGAACTGAATGAATTTGACAGGGTTGTATTGCCTA
CCAGCTTAATGCTTGGTATTTTCTCAACGGCATCCATTGACAATCTAGAT
ATTGCAATTAAATCAGCATTAGCTACAACATCTTTCCATGGGACTGCGGC
TTCTATCAATCAACATCCTAAAGCCATTGGTCAAGGTTTTCCGAGGAAAG
CTCCTAGAGTTGAAAAAATTCAGTCCGAGACACTGAAGAATCTCCCAACA
TCATATACTGACGTACCTCCTTTTGATTTGCCAAGTGAAGTTAAACCTCC
TGCATTTAAAAAGTCTAATGTTCCAAAACAAGACTCGGTGGCTGATCAAA
CGAAAGACAAGAAATGGTTAGAGAATCCAGAACAGTTATCATGGGCAGTC
TATCATTCAAAAGAACGAAACCCAGCAACCTGTAAAGATATCTCAGCAAT
GTTGCCAATTTTTCGTGATGATTCAAAGTCGCCAGCTACAATCAAACATC
TACTCAATGTTCTCATTCATTCTATCAGCTTCTTAAATCCAGGTCAACCT
GCTGTTATTGGGCTCGACCAACCGCTATTTGCACTTGCTAAAAGGATTCA
ATGGTATCAGCCATCATTATATGGTGAAAAGAAGCTGGTGTTGATGCTCG
GAGCACTTCACATTGAAATGGTCATGTTGAGTTGTTTGGGTGATTGGCTT
GAGGATAGTGGCTGGACTATTGTCGTCTCCAACAGTGGTATCTCGTCATC
TGGAAATGACTCCTTATTAACTGGCCACGATGTTGCCCAAACAAAATATG
TGCATCAAGTAACTGCTATGGCCTTGCATCGCCTAATGAAATCAGCATAT
GACAACAGGACACCAAAAAATGCGaacacttttgaaatttggagaGCCGA
GATGGAAAAAGAGAACCCACAGttcaaattttggtcaattgcTTTGAAGA
TGGAAATGGATTATCTTACGTTTCTACGCTCCATTCGGTCTGCTGATTTC
AAACTCTACGTCGCatcattaaaaaagtttttgccaTGGATCTTCCTCTT
CGACCATGTCCATTATGCTCGTTGGCTAACCATTCATCATCACGACATGG
AAGTTTTGAAAGACACAAATCCTCAAGTATACGAAGAGTTTGTGACAAAC
GGAAACTTCGTTGTGAACAGAACTCAAAACCGCTTCTCTAGCATGGGTCT
GGATCAACGCCATGAACAACTGAACAAAGATGTCAAAGGTTTGTATAAAG
TATCAAAATTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043489XLOC_043489Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069836-proteinTCONS_00069836-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069836-exon-scaffold_51-1491911889:174932..175622TCONS_00069836-exon-scaffold_51-1491911889:174932..175622Clytia hemisphaericaexon
TCONS_00069836-exon-scaffold_51-1510915933:174932..175622TCONS_00069836-exon-scaffold_51-1510915933:174932..175622Clytia hemisphaericaexon
TCONS_00069836-exon-scaffold_51-1575043694:174932..175622TCONS_00069836-exon-scaffold_51-1575043694:174932..175622Clytia hemisphaericaexon
TCONS_00069836-exon-scaffold_51-1491911889:175811..176453TCONS_00069836-exon-scaffold_51-1491911889:175811..176453Clytia hemisphaericaexon
TCONS_00069836-exon-scaffold_51-1510915933:175811..176453TCONS_00069836-exon-scaffold_51-1510915933:175811..176453Clytia hemisphaericaexon
TCONS_00069836-exon-scaffold_51-1575043694:175811..176453TCONS_00069836-exon-scaffold_51-1575043694:175811..176453Clytia hemisphaericaexon
TCONS_00069836-exon-scaffold_51-1491911889:176599..179077TCONS_00069836-exon-scaffold_51-1491911889:176599..179077Clytia hemisphaericaexon
TCONS_00069836-exon-scaffold_51-1510915933:176599..179077TCONS_00069836-exon-scaffold_51-1510915933:176599..179077Clytia hemisphaericaexon
TCONS_00069836-exon-scaffold_51-1575043694:176599..179077TCONS_00069836-exon-scaffold_51-1575043694:176599..179077Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_51supercontigscaffold_51:174932..179077 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.511656 0.451174 0.831617 1.00321 0.995638 0.566472 0.6328 0.774801 0.398176 0.3883 0.179519 0.216349 0.288952 0.253646 0.169888 0.251943 0.0782403 0.257528 0.33486 0.50371 0.290639 0.42762 0.167301 0.202748 0.32657 0.40215 0.310455 0.198275 0.251299 0.256034
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069836 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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