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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069806 ID=TCONS_00069806|Name=TCONS_00069806|organism=Clytia hemisphaerica|type=transcript|length=805bp
gaaaatgggGAAATGAGTCACACATTTTTGAAATGCGATATATGTATGGA
AATACATCCTCAATTCCACACATCTTTTGAAAACAAAGATAATCGCTTAG
TCAATTTAAATAATATAAAactcaataaaaaaaatatctgtCCAAAATGT
GTCACAGACAGTAGAAAGCGCAAACCAAAAAAGACCGCAAGCAATGAAAA
TCAAGATGTAAAATGTACTAAGAAAAATGAATCcaataataaaataaatc
aaGAGCTTAGAGCTGCAAAGTGGTCCGGTATTGATAGTCCTGAAAGTGAT
CTTGGTCCAAAACAAGACATAATTAAGCATAATAACATGCACTTTGGTCC
AATTCCAGaatgtttcaaaaatcttacaacTGTTGAATTGGCACTCATAT
CTAAAATAACTGTCTGTATGCGTGTTCACATGCTGAGGTATGGCATGATG
TCATCTAAGGGCCATTCTATAAGCATCCCTCAGAGGATGTCAATAGCCAC
CCAGTTACCTAAACTTCCTGAGCAGGTAGGTATTGTTGTTTTAAAACGCA
GAGGTCAAAAGCAACAGAAAGTCAGACATTTCACTGTACAAAGACAAGCA
GTTGAAATTGCATTGAAATGCTTATGCTTTGGAATACCAAACGGTGGTTA
TGACACGCTTAGAgctaatacaaaaaaatactgCGGACCAGACCATAAAA
ATAGAACATTGACTAACAaatattttgagcattttccaAACCCTTATTAT
TTTGATGTTGATATAATGTTTGAAAGATTGAGTGCTCTACCAGCAGAAAG
GGANN Run BLAST on NCBI protein sequence of TCONS_00069806-protein >TCONS_00069806-protein ID=TCONS_00069806-protein|Name=TCONS_00069806-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
ENGEMSHTFLKCDICMEIHPQFHTSFENKDNRLVNLNNIKLNKKNICPKC
VTDSRKRKPKKTASNENQDVKCTKKNESNNKINQELRAAKWSGIDSPESD
LGPKQDIIKHNNMHFGPIPECFKNLTTVELALISKITVCMRVHMLRYGMM
SSKGHSISIPQRMSIATQLPKLPEQVGIVVLKRRGQKQQKVRHFTVQRQA
VEIALKCLCFGIPNGGYDTLRANTKKYCGPDHKNRTLTNKYFEHFPNPYY
FDVDIMFERLSALPAERX Run BLAST on NCBI transcript from alignment at scaffold_508:34065..34869 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069806 ID=TCONS_00069806|Name=TCONS_00069806|organism=Clytia hemisphaerica|type=transcript|length=805bp|location=Sequence derived from alignment at scaffold_508:34065..34869 (Clytia hemisphaerica)
NNTCCCTTTCTGCTGGTAGAGCACTCAATCTTTCAAACATTATATCAACA
TCAAAATAATAAGGGTTtggaaaatgctcaaaatattTGTTAGTCAATGT
TCTATTTTTATGGTCTGGTCCGcagtatttttttgtattagcTCTAAGCG
TGTCATAACCACCGTTTGGTATTCCAAAGCATAAGCATTTCAATGCAATT
TCAACTGCTTGTCTTTGTACAGTGAAATGTCTGACTTTCTGTTGCTTTTG
ACCTCTGCGTTTTAAAACAACAATACCTACCTGCTCAGGAAGTTTAGGTA
ACTGGGTGGCTATTGACATCCTCTGAGGGATGCTTATAGAATGGCCCTTA
GATGACATCATGCCATACCTCAGCATGTGAACACGCATACAGACAGTTAT
TTTAGATATGAGTGCCAATTCAACAgttgtaagatttttgaaacattCTG
GAATTGGACCAAAGTGCATGTTATTATGCTTAATTATGTCTTGTTTTGGA
CCAAGATCACTTTCAGGACTATCAATACCGGACCACTTTGCAGCTCTAAG
CTCttgatttattttattattgGATTCATTTTTCTTAGTACATTTTACAT
CTTGATTTTCATTGCTTGCGGTCTTTTTTGGTTTGCGCTTTCTACTGTCT
GTGACACATTTTGGacagatattttttttattgagtTTTATATTATTTAA
ATTGACTAAGCGATTATCTTTGTTTTCAAAAGATGTGTGGAATTGAGGAT
GTATTTCCATACATATATCGCATTTCAAAAATGTGTGACTCATTTCccca
ttttc Coding sequence (CDS) from alignment at scaffold_508:34065..34869 >TCONS_00069806 ID=TCONS_00069806|Name=TCONS_00069806|organism=Clytia hemisphaerica|type=CDS|length=804bp|location=Sequence derived from alignment at scaffold_508:34065..34869 (Clytia hemisphaerica)
NTCCCTTTCTGCTGGTAGAGCACTCAATCTTTCAAACATTATATCAACAT
CAAAATAATAAGGGTTtggaaaatgctcaaaatattTGTTAGTCAATGTT
CTATTTTTATGGTCTGGTCCGcagtatttttttgtattagcTCTAAGCGT
GTCATAACCACCGTTTGGTATTCCAAAGCATAAGCATTTCAATGCAATTT
CAACTGCTTGTCTTTGTACAGTGAAATGTCTGACTTTCTGTTGCTTTTGA
CCTCTGCGTTTTAAAACAACAATACCTACCTGCTCAGGAAGTTTAGGTAA
CTGGGTGGCTATTGACATCCTCTGAGGGATGCTTATAGAATGGCCCTTAG
ATGACATCATGCCATACCTCAGCATGTGAACACGCATACAGACAGTTATT
TTAGATATGAGTGCCAATTCAACAgttgtaagatttttgaaacattCTGG
AATTGGACCAAAGTGCATGTTATTATGCTTAATTATGTCTTGTTTTGGAC
CAAGATCACTTTCAGGACTATCAATACCGGACCACTTTGCAGCTCTAAGC
TCttgatttattttattattgGATTCATTTTTCTTAGTACATTTTACATC
TTGATTTTCATTGCTTGCGGTCTTTTTTGGTTTGCGCTTTCTACTGTCTG
TGACACATTTTGGacagatattttttttattgagtTTTATATTATTTAAA
TTGACTAAGCGATTATCTTTGTTTTCAAAAGATGTGTGGAATTGAGGATG
TATTTCCATACATATATCGCATTTCAAAAATGTGTGACTCATTTCcccat
tttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069806-exon-scaffold_508-1491911889:34065..34869 | TCONS_00069806-exon-scaffold_508-1491911889:34065..34869 | Clytia hemisphaerica | exon |
| TCONS_00069806-exon-scaffold_508-1510915933:34065..34869 | TCONS_00069806-exon-scaffold_508-1510915933:34065..34869 | Clytia hemisphaerica | exon |
| TCONS_00069806-exon-scaffold_508-1575043694:34065..34869 | TCONS_00069806-exon-scaffold_508-1575043694:34065..34869 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_508 | supercontig | scaffold_508:34065..34869 . |
Blast
The following BLAST results are available for this feature:
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