TCONS_00069800 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069800
Unique NameTCONS_00069800
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length881

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069800 ID=TCONS_00069800|Name=TCONS_00069800|organism=Clytia hemisphaerica|type=transcript|length=881bp
TTAGGTTGCAGTGGTTCAGATGAAAGCTACCAATCAAGTTTTTGCTATGA
AAACATTGAATAAATGGGAAATGGTAAAAAGAGCTGAGACGGCTTGCTAC
AGAGAAGAACGTGATATTCTTGTGTTTGGTGATAAAAGGTGGATAACAAA
ACTACATTATGCATTTCAAGATTCTGGTAATTTGTACTTCGTCATGGACT
ATTATAGTGGTGGAGATCTGTTAACATTGTTGAGTAAATATGAAGATCAT
TTGCCTGAAAGCATGATGAAATTCTATGTGGCAGAGATTATTCTGGCGAT
CAATTCAATACATGAAATGAATTATGTTCACAGAGATATCAAGCCAGACA
ATGTGTTAATAGATGTGAATGGTCACATAAAGTTGGCAGATTTTGGATCT
TGTTTGCAGATTGGACCTGACGGTTATGTCAAATGTTCAGTTGCAGTTGG
AACACCAGATTACATTAGTCCTGAAATTTTACAGGCAATGGAAGATGGTA
AAGGTCAATATGGAAAAGAATGCGATTGGTGGTCACTGGGTATTTGTTGT
TATGAAATGATATATGGGGAAACACCATTCTACGCTGAATCGCTCATTGA
AACCTATGGACAAATCATGGATCATAAGAgtaaattcaaatttccagaCG
ATTATGAAGTATCAGATAGTTGCAAGAACCTTTTATCCAGTTTGGTTTGT
GATGCTGATAAGAGGCTTGGTAAAAGAGGACTTCACGATTTCAAGCAACA
TTCGTTTTTCAATGGAATCGATTGGAATAATATTTTAGATATAACGCCGC
CTTACGTGCCCGAACTGGATGGTCCAACCgacgtttcaaattttgatatt
gacGATCTGATGGAAGCAAAAACACAGGTAT
Run BLAST on NCBI

transcript from alignment at scaffold_508:151375..159157-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069800 ID=TCONS_00069800|Name=TCONS_00069800|organism=Clytia hemisphaerica|type=transcript|length=7783bp|location=Sequence derived from alignment at scaffold_508:151375..159157- (Clytia hemisphaerica)
TTAGGTTGCAGTGGTTCAGATGAAAGCTACCAATCAAGTTTTTGCTATGA
AAACATTGAATAAATGGGAAATGGTAAAAAGAGCTGAGGTATTCTGATTT
TCTTTTTGTTTCATTTACCTTAGTTGTTTCCCTTGGGGGCAAGTTACTCA
CAAGCAGCAAGGCTTAAAAGAAATTGTAATATTTACTTCTTATAGGCAAA
ACTGATTCTATACTTTTAGCTGTCTTCGTTTCAAAATAAGTAAAGACCCT
GAGTTTTAAAGCACTTTGAATTTCAAAAATGTTTAAAAAGATGATTGGTG
TGTGTATAATTCTTCAATATTTTGTGTTGAGTTTGCAGAATCATAAATGT
ATATAAAATTGGTTTCTATTCTCTTTCATTAAAAGACGGCTTGCTACAGA
GAAGAACGTGATATTCTTGTGTTTGGTGATAAAAGGTGGATAACAAAACT
ACATTATGCATTTCAAGATTCTGGTAATTTGGTGAGTATGCTTTGGAGTT
GCAAAATAGTGGTATAATTCTGTTTTTTATGCCCTAAACCTGAAATGAAC
CCTTGATTAGAAATTACTCAAAGTGTGCAGAGGGGTCCAGCCCCCCAGCA
TTTTTCAGGGGGGGGGGGCTAAGGGAAATAAACCCCGGCTAAATTCTAGA
AACATAGCCCCCATCTTCACAAAGCAAAATATCTAAGAAATTTTGCATGC
ANCCAATCCATATATGCAATAAATTTGAGAAATAAAGTCAAGTTTTCAAT
CGATTGCAAGAGCAGACATAATATTTGTGTGTAATGTACATCCCAGAAAC
ACAGTGAGTACCAGGCCGCTGGTCAAACATTTGATCATAATTTAACCTTT
TTTAGGTTGCAGTGGTTCAGATGAAAGCTACCAATCAAGTTTTTGCTATG
AAAACATTGAATAAATGGGAAATGGTAAAAAGAGCTGAGGTATTCTGATT
TTCTTTTTGTTTCATTTACCTTAGTTGTTTCCCTTGGGGGCAAGTTACTC
ACAAGCAGCAAGGCTTAAAAGAAATTGTAATATTTACTTCTTATAGGCAA
AACTGATTCTATACTTTTAGCTGTCTTCGTTTCAAAATAAGTAAAGACCC
TGAGTTTTAAAGCACTTTGAATTTCAAAAATGTTTAAAAAGATGATTGGT
GTGTGTATAATTCTTCAATATTTTGTGTTGAGTTTGCAGAATCATAAATG
TATATAAAATTGGTTTCTATTCTCTTTCATTAAAAGACGGCTTGTTACAG
AGAAGAACGTGATATTCTTGTGTTTGGTGATAAAAGGTGGATAACAAAAC
TACATTATGCATTTCAAGATTCTGGTAATTTGGTGAGTATGCTTTGGAGT
TGCAAAATAGTGGTATAATTCTGTTTTTTATGCCCTAAACCTGAAATGAA
CCCTTGATTAGAAATTACTCAAAGTGTGCAGAGGGGTCCAGCCCCCCAGC
ATTTTTCAGGGGGGGGGGGCTAAGGGAAATAAACCCCGGCTAAATTCTAG
AAACATAGCCCCCATCTTCACAAAGCAAAATATCTAAGAAATTTTGCATG
CAAATTGGCGATAAATTCATTGCACCGCAGAAAAAGCTCTGCTCCCAGTT
CTATTACACAACACTCAGCCTTCCCTAGCAAGCTAGCCCCCAGTATTTTT
TGGAGAAATACAGCCCCCACTCAAACAAAAATGGTTTAGCCCCCCTCCCC
AAGCTCAGGGGGGTGCATTCTATGGTACTGTGGTACCTAAAATAAGGTTC
AGATTTTAAGACTTTTTACTAAACAATAGAAAAAATTCATCTAAAACTTA
ATTAGAATTCAAATTAAAATCTGTTAGCATGTTCATCCCTTTTCAATGAT
TTTTAGAATATCCCTTTACTTTTTTCCTTATAGTACTTCGTCATGGACTA
TTATAGTGGTGGAGATCTGTTAACATTGTTGAGTAAATATGAAGATCATT
TGCCTGAAAGCATGATGAAATTCTATGTGGCAGAGATTATTCTGGCGATC
AATTCAATACATGAAATGAATTATGTTCACAGGTACAGTTGAAATCTTTT
TTTAAATTCCAGCCTTGATGAGCCATTCCAAGAAAACATCAACCAACACC
TCTATCAGTGGTGTTGGTTGCTTTGAACAAAATGACGTTTTATCTGAACT
AGACAGTTTTGTTGACTTTTGTAAAAAGAAAGAAGTCGACAATACCATCA
TTACAGACATAAATGTTAAAACATTGGCATATATCAAAAAATGTAAAAAA
CAGAAGTCACCACGGCACCTTCAATTAACCAAACAGTATCTCAAACAAAA
TAATCTTTTGGCTATCCCATTTGATAAAGGCATCGGTATTTGCATCATGA
AATCATCAACGTACAACGAAAAATTAAATGCGATCGTGAACTTGCCACAG
TTTGAAAAGGTTTTGCCGAAAAGGAAAAATGAACGAAATCCTATCTTGAA
AGAAGAAGACCGCGTCGTCAAGTGCCTGTCAGATCTTCACATAAAGAATA
AGATATCAGAGAAACTTTTCAAGAAACTAAAACCCATCGGTAGTCAACCA
CCTCGCTTGTATGGCCTAGCGAAAGTCCATAAAAATGGTTTACCGGTCAG
ACCAGTACTTTCAATGCCTGGCTCAGCTTACTACAACATCGCAAAACAAA
CCGCCGAATGGCTTTCCGTTGTCAACGAATGCTGCATCAATACATCTTCG
AAATCCATCTCCGATAAATTGGACGAAATTGTTTTGAAAGCTGACCATGA
ACTTGTTAGTTTCGATATCGTATCTTTGTACACTAACGTTCCAGTTCTTG
AAGCCATCGATGTTTGTGCTGATCTTTTATATTCTGGAGAATACAAAAAG
CCTCCAGTTGATAAAGAAACTTTCATCGAACTGTTGAAAATTTGCAGTGA
AAACGTAATAATGCTAACACACGATGGTCTTTACAGACAAAAGGATGGTT
TGGCGATGGGCAGTCCCCCAGCACCAATGCTGGCAAACGGCTGGTTGAGT
ACGTATGATCCTATTATAAAGGAGGATGCTATGATTTATGAAAGATACGT
GGACGACATCTTACGTGACATTCATAAAGATAAGATCGATGACACTCTCG
AGAAAATCAACACATTGAACCCAGAGTTTCTTAAATTCACCGTCGAACAC
GAATCTGACGATAAGATCGCGTTTCTTGACATGGAAATACACAGAACTGT
TAACCGACTCCAGTCCACTTGGTTTACCAAGTCGACCGATACGGGTTTGA
TGATGAACTATCTTGCCCTTGCCCCAATGAAATACAAGAGATCAGTTGTT
TGTGGTATGATTCACCGAATTTTCAGAGCTTGCAGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAG
AGACGAATACAAAAGCCATGAATTGGTCATAAAACTATTTTGATTTTTTT
TTTTTGTCACTTGAGAATTAGCTCTCATTTAATTAGGTTTTGTAGGTTGT
TTTTTTCAATCAAATTTTTTCAATCAATTTTTTTTTTCTCTTTACAGTAG
GTTATGTGTAGTTGTAGTGTGAGATGTATATGATGTTTTTACTCTAGATT
TTAATCTTGTTTTTNTATTATAGTGGTGGAGATCTGTTAACATTGTTGAG
TAAATATGAAGATCATTTGCCTGAAAGCATGATGAAATTCTATGTGGCAG
AGATTATTCTGGCGATCAATTCAATACATGAAATGAATTATGTTCACAGG
TACAGTTGAAATCTTTTTTTAAATTCCAGCCTTGATGAGCCATTCCAAGA
AAACATCAACTAACACCTCTATCAGTGGGGGGCAATCGCTTTGTGCAAAT
GCGTGAATGGGCTTTGGCATTTGCGTGAAAAATTAGTGTGACTAAGTGAA
TAAGGTCAGCTGGGACTCATCAGTGCTATCAAATGATGCATGGGTCCTAC
CTACTGATATCCAGTCAAAAAAGTGTGATACAATGTACCAGAATGTACCC
CTTATTTAAAAATGCTAATTTTGTGATAATTTCAGAGATATCAAGCCAGA
CAATGTGTTAATAGATGTGAATGGTCACATAAAGTTGGCAGATTTTGGAT
CTTGTTTGCAGATTGGACCTGACGGTTATGTAAGTAAGGCTTTTACTGAT
ACTAAAGCTTCTTTGTAAAGATTACCTACTATAAAACTCCACCTTGAAAT
TGGGATTTAAGTTTAAGTTTTAAAAATTATTTTCCAAGAGACCAGACCCC
ATTACTCGATAAATTCGTTAATCAAACAACTCAAACTTACTCAAACTTAC
TCTCGAACCTACTTGAACAAGTAAAGTCCGAGTAATTCCTTTACTTGAAC
TTTTGGAAATTTTCAAAAATTGGTGAGGAGTTCCAAAAGTTTGAGAAATT
CAATTGAAGAAAAGTTCGATAAGTTTGATTAGTTTTACGAGCCTCACCGG
TAAAATTTAGGAGCAAAAAGAAATTAAATCTTCCTATTTTATCAGATGGT
ATGCTATGGTTGAACTAGAATTGGCAGATTTTCAATTTTCAACTTTATTC
GAACTTCACTCAAAACTTTTAATATACCTAATTACTGGAACTTATATTTT
TGAAAAATTTTGAGGAGTTTGAGTAATTTGTTTACTCGAAGTTAACTTGT
TTGAGTAAGTTTGAATAAGTTCGGAGTAAAAAAGTGGTTTGGGATCGAGT
AATGGGGTCTGGAAGAGAATATTTGAAACATGTCTCTAATGTTTTTCATT
AGAATGTTATGTTAATCAGAACTTTTTTACATTTTTAAACAGGTCAAATG
TTCAGTTGCAGTTGGAACACCAGATTACATTAGTCCTGAAATTTTACAGG
TAAGTTCTTTTGGAGGATTAGAGGGTTATGTTGTGTTGAACAAAACAGCC
TAACGCTTGATTTCCTAAAAATTAAAATAATTGGTGTGATTTTTCAACCT
TTTTACAAAAGTCTTGAAAAAATTAGAGAGTTAAAATTGGATGGGAATAA
AAAGATCTGTCTAATTTTTCAACAGGCAATGGAAGATGGTAAAGGTCAAT
ATGGAAAAGAATGCGATTGGTGGTCACTGGGTATTTGTTGTTATGAAATG
ATATATGGGGAAACACCATTCTACGCTGAATCGCTCATTGAAACCTATGG
ACAAATCATGGATCATAAGGTATTTTATAGAAACTGATGAAAGGGATCTT
TTTTTCAACTCTTCTTTTAACTCAGCAAACGGCCAACATGACAAAGTACA
AATTATGTTTGAGAGTTTAAAATTCTCTCTCTTTTAAAAAGGAAAGACTC
GATTTTACTTTTTAACACTTTTTATTCAGAGTAAATTCAAATTTCCAGAC
GATTATGAAGTATCAGATAGTTGCAAGAACCTTTTATCCAGGTAATCCGT
ACTCAGATTCTATCATTCCTTGAGGCTCAAGTTTCCTATATATAACCATG
TAAAATAGTTACATAACCACCCTCCCATAGTGGAGTGAAATGAAGTATTT
TTTTTAAAAGATTTTTGCCTTGTGGAGGTACCAGAATGATATTGATATTA
GTCTCTTCTAATTAATCTCTCCTAATTGCATTTCGCGGGTTTCAATTTTC
GCGGTTTTGCCCTTATTTGGACAAATTTCTTTCACTTTCCTAGGGGTTTT
GCAATTCTTTTGATAGAATTGGAAAAAATTGTATTTCGCAGGTTCAAATT
TTTGTGGCTTTGCCAAATAACCGCGAAAAACACTAAAATCAATTCACGTG
AAAATTAGTTCCAATAAGGTAAATAATGATTTTAATGATTTACATGCATT
AATATTGCTCTAAATAATTTCAGTTTGGTTTGTGATGCTGATAAGAGGCT
TGGTAAAAGAGGACTTCACGATTTCAAGCAACATTCGTTTTTCAATGGAA
TCGATTGGAATAATATTTTAGATAGTAAGTAAAACCGATATGATACTGCT
AGCTGAGTACATATTTTTTTGGAAAAATGGATACACGTGTAGCTTCTGGC
TTTTCCATGGACTGGACTGCACTGACAAGTGGCCTAATGTAATATGGCAG
ACTCCATTTTTCGGCTTTGTTTGAGCATGCAATCCATTCCACTAGATACA
ATCATTTTATTGAAGAAAAACAAACAGAAAATCATGACCAAGTGATAATT
TATAAAACTTATTGTAGCTCTTTAAATCTCAAAGGGGTTTTTGAAATAAA
TTTCGTTTTGTTGTTTTTATGGAATTTTTAACAACTAAAGTGAACACTTT
TAAGATGCAAAATCCTCTAGTCTCCTCACTGGTCTCTTAGAGCCATAGAA
AACATCAGAAATCAAAGTTCAGTCAAAAATAAACTATATTTCTACTACAT
TTGGATCAATTGAATTGAATTTTTAATTCTTACCGTAGAATCAAATTTTT
GTAACTACTAGTCGCTTGTTATTCGACAGGCCTTGACTGGTATGTTTAGT
CTTTTTGCTACTTTAACGTTTGCCATTGCATGCCCTTTTTTGAGAGATTA
AATAAGAAATCTAACATTATTTTAGTGAAGTAAAAACTACAAAAAATAAA
TTTGAATCTTCAAAAAATTATATTTAACCTACCTTACCAAATACTTTCTG
TACAACCCTATTCAAATAGTCCATTGCAAGTCTTTTTCTCTTGTTCATGT
CAAATTTCATGTTGCCAAACGCTCTGCAAATAATCTTAAAGCTCTTCATG
AATCCTGACAAGATGTAAGATTGTTATTTTCCTGTTGAGAAGATCTCCCT
TAGATAAGACAAGGTCAATCACTTTATTTTTTTGAGACGTATATTTAATT
GATTTCCCTGTTACCTGCATGCTATTATCATAAGGAATAGGTAGATCTGT
ATCATTATCAATTTGTTTTGAGAAAATCTTTAAAATACATTTCAGTGAGT
GTAGATAATTCAATAGCGACTGTCTTTTGCAGAGCGTCTTTTATTGACGT
GCCAGAAAAACTGTGACAAAATTTGCTGCACTGGTATTGACGCTTCTTGC
TTGTCAGCTGATGGTTATCTTTTTCTACTTTTCTCTTTCTCAGTAACGCC
GCCTTACGTGCCCGAACTGGATGGTCCAACCGACGTTTCAAATTTTGATA
TTGACGATCTGATGGAAGCAAAAACACAGGTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043460XLOC_043460Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069800-exon-scaffold_508-1575043694:159070..159157TCONS_00069800-exon-scaffold_508-1575043694:159070..159157Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1575043694:158706..158772TCONS_00069800-exon-scaffold_508-1575043694:158706..158772Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1575043694:157826..157854TCONS_00069800-exon-scaffold_508-1575043694:157826..157854Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1575043694:157126..157274TCONS_00069800-exon-scaffold_508-1575043694:157126..157274Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1575043694:154379..154472TCONS_00069800-exon-scaffold_508-1575043694:154379..154472Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1575043694:153659..153715TCONS_00069800-exon-scaffold_508-1575043694:153659..153715Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1575043694:153339..153482TCONS_00069800-exon-scaffold_508-1575043694:153339..153482Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1575043694:153117..153178TCONS_00069800-exon-scaffold_508-1575043694:153117..153178Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1575043694:152584..152684TCONS_00069800-exon-scaffold_508-1575043694:152584..152684Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1575043694:151375..151464TCONS_00069800-exon-scaffold_508-1575043694:151375..151464Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1510915933:159070..159157TCONS_00069800-exon-scaffold_508-1510915933:159070..159157Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1510915933:158706..158772TCONS_00069800-exon-scaffold_508-1510915933:158706..158772Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1510915933:157826..157854TCONS_00069800-exon-scaffold_508-1510915933:157826..157854Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1510915933:157126..157274TCONS_00069800-exon-scaffold_508-1510915933:157126..157274Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1510915933:154379..154472TCONS_00069800-exon-scaffold_508-1510915933:154379..154472Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1510915933:153659..153715TCONS_00069800-exon-scaffold_508-1510915933:153659..153715Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1510915933:153339..153482TCONS_00069800-exon-scaffold_508-1510915933:153339..153482Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1510915933:153117..153178TCONS_00069800-exon-scaffold_508-1510915933:153117..153178Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1510915933:152584..152684TCONS_00069800-exon-scaffold_508-1510915933:152584..152684Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1510915933:151375..151464TCONS_00069800-exon-scaffold_508-1510915933:151375..151464Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1491911889:159070..159157TCONS_00069800-exon-scaffold_508-1491911889:159070..159157Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1491911889:158706..158772TCONS_00069800-exon-scaffold_508-1491911889:158706..158772Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1491911889:157826..157854TCONS_00069800-exon-scaffold_508-1491911889:157826..157854Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1491911889:157126..157274TCONS_00069800-exon-scaffold_508-1491911889:157126..157274Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1491911889:154379..154472TCONS_00069800-exon-scaffold_508-1491911889:154379..154472Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1491911889:153659..153715TCONS_00069800-exon-scaffold_508-1491911889:153659..153715Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1491911889:153339..153482TCONS_00069800-exon-scaffold_508-1491911889:153339..153482Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1491911889:153117..153178TCONS_00069800-exon-scaffold_508-1491911889:153117..153178Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1491911889:152584..152684TCONS_00069800-exon-scaffold_508-1491911889:152584..152684Clytia hemisphaericaexon
TCONS_00069800-exon-scaffold_508-1491911889:151375..151464TCONS_00069800-exon-scaffold_508-1491911889:151375..151464Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_508supercontigscaffold_508:151375..159157 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.27596	1.26012	0.871779	0.792699	1.19488	1.71277	0.119535	0.0700317	6.42522	3.43414	6.33751	1.21641	7.09963	6.20511	2.50773	7.15031	6.64009	0.000443261	5.26757	0.0691168	7.02308	8.20382	0.026126	5.69843	0.571545	5.03956	6.19047	4.5255	0.0707523	7.83676
Blast
[Close]
BLAST of TCONS_00069800 vs. Swiss-Prot (Human)
Match: MRCKA (Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens GN=CDC42BPA PE=1 SV=1)

HSP 1 Score: 450.284 bits (1157), Expect = 2.810e-145
Identity = 195/285 (68.42%), Postives = 245/285 (85.96%), Query Frame = 2 
Query:    5 VAVVQMKATNQVFAMKTLNKWEMVKRAETACYREERDILVFGDKRWITKLHYAFQDSGNLYFVMDYYSGGDLLTLLSKYEDHLPESMMKFYVAEIILAINSIHEMNYVHRDIKPDNVLIDVNGHIKLADFGSCLQIGPDGYVKCSVAVGTPDYISPEILQAMEDGKGQYGKECDWWSLGICCYEMIYGETPFYAESLIETYGQIMDHKSKFKFPDDY-EVSDSCKNLLSSLVCDADKRLGKRGLHDFKQHSFFNGIDWNNILDITPPYVPELDGPTDVSNFDIDD 856
            VAVV++K  ++VFAMK LNKWEM+KRAETAC+REERD+LV GD +WIT LHYAFQD  NLY VMDYY GGDLLTLLSK+ED LPE M +FY+AE+++AI+S+H+++YVHRDIKPDN+L+D+NGHI+LADFGSCL++  DG V+ SVAVGTPDYISPEILQAMEDGKG+YG ECDWWSLG+C YEM+YGETPFYAESL+ETYG+IM+HK +F+FP    +VS++ K+L+  L+C  + RLG+ G+ DFK+H FF+GIDW+NI +   PY+PE+  PTD SNFD+DD
Sbjct:   91 VAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDD 375
The following BLAST results are available for this feature:
BLAST of TCONS_00069800 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MRCKA2.810e-14568.42Serine/threonine-protein kinase MRCK alpha OS=Homo... [more]
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