|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069724 ID=TCONS_00069724|Name=TCONS_00069724|organism=Clytia hemisphaerica|type=transcript|length=891bp
tttttttctaaatcatTCGTAACAAATTGCAGCAACataatttttgacaa
atttttggtAAAACGTTTTGCGAGAAGGGAgagagataattttttttgtc
attttgttttAGCTTGAATTTTTCCTTTAAGAAATTATGTatatattatg
atttttttcagctaaaaattgcaataaaataaaaaaagttgtataaaaat
tatttcacatCGACATTCTCTTTTCCAGTAAAAAAGtcacattttaaaat
ttagagCATGATAAAAAACACTTAGACCGCTACACCTCACATAATAACGT
CACCCCAGAAGATTATCATCGTCTTAAAGCGGTTGATAACCAATAAAATT
CCACTGTTTATTACGAATATTTTATGCTCTAAAATGTCTATTTGAACATA
ATCTTCAACttcagtttttgaaattttccataaatTCATCATGATCTGTC
AGAGCGACTTCCACAAAACTTTTCGTGATTTCTCGAAAATGTGAGAATAC
TTCGTTCGATAAAGTATCGCAATCTGTCGAGTTACGAGCAACATCATTTC
CATTGACGTCTTGTTTATTTTCGTTGTCACAATCTTCGTCGAAGCTTGGT
CCTCGGTCGTAACGTAATGTGACTTTGGAAATGcttgaaataaaagtcat
ttaggctgggcttaaaaatttgttggtttgccgtcacccgaccctagatt
ttggaggtgggtcggtcggtcggaatttttttttattttggcgatttatg
aaattttcgtccatggaaaggttaacagtttgtttacatttaggtaatct
tgaataaaaaaacagaagtgctagcagggaatttacgattctaaTGCTTG
AGACAAAaaagatacgagttttgattttttattgtttgaag Run BLAST on NCBI transcript from alignment at scaffold_506:364546..365526- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069724 ID=TCONS_00069724|Name=TCONS_00069724|organism=Clytia hemisphaerica|type=transcript|length=981bp|location=Sequence derived from alignment at scaffold_506:364546..365526- (Clytia hemisphaerica)
TTTTTTTCTAAATCATTCGTAACAAATTGCAGCAACATAATTTTTGACAA
ATTTTTGGTAAAACGTTTTGCGAGAAGGGAGAGAGATAATTTTTTTTGTC
ATTTTGTTTTAGCTTGAATTTTTCCTTTAAGAAATTATGTATATATTATG
ATTTTTTTCAGCTAAAAATTGCAATAAAATAAAAAAAGTTGTATAAAAAT
TATTTCACATCGACATTCTCTTTTCCAGTAAAAAAGTCACATTTTAAAAT
TTAGAGCATGATAAAAAACACTTAGACCGCTACACCTCACATAATAACGT
CACCCCAGAAGATTATCATCGTCTTAAAGCGGTTGATAACCAATAAAATT
CCACTGTTTATTACGAATATTTTATGCTCTAAAATGTCTATTTGAACATA
ATCTTCAACTTCAGTTTTTGAAATTTTCCATAAATTCATCATGATCTGTC
AGAGCGACTTCCACAAAACTTTTCGTGATTTCTCGAAAATGTGAGAATAC
TTCGTTCGATAAAGTATCGCAATCTGTCGAGTTACGAGCAACATCATTTC
CATTGACGTCTTGTTTATTTTCGTTGTCACAATCTTCGTCGAAACTTGNT
AAAGTATCGCAATCTGTCGAGTTACGAGCAACATCATTTCCATTGACGTC
TTGTTTATTTTCGTTGTCACAATCTTCGTCGAAGCTTGGTCCTCGGTCGT
AACGTAATGTGACTTTGGAAATGCTTGAAATAAAAGTCATTTAGGCTGGG
CTTAAAAATTTGTTGGTTTGCCGTCACCCGACCCTAGATTTTGGAGGTGG
GTCGGTCGGTCGGAATTTTTTTTTATTTTGGCGATTTATGAAATTTTCGT
CCATGGAAAGGTTAACAGTTTGTTTACATTTAGGTAATCTTGAATAAAAA
AACAGAAGTGCTAGCAGGGAATTTACGATTCTAATGCTTGAGACAAAAAA
GATACGAGTTTTGATTTTTTATTGTTTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069724-exon-scaffold_506-1575043694:364985..365526 | TCONS_00069724-exon-scaffold_506-1575043694:364985..365526 | Clytia hemisphaerica | exon |
| TCONS_00069724-exon-scaffold_506-1575043694:364546..364894 | TCONS_00069724-exon-scaffold_506-1575043694:364546..364894 | Clytia hemisphaerica | exon |
| TCONS_00069724-exon-scaffold_506-1510915933:364985..365526 | TCONS_00069724-exon-scaffold_506-1510915933:364985..365526 | Clytia hemisphaerica | exon |
| TCONS_00069724-exon-scaffold_506-1510915933:364546..364894 | TCONS_00069724-exon-scaffold_506-1510915933:364546..364894 | Clytia hemisphaerica | exon |
| TCONS_00069724-exon-scaffold_506-1491911889:364985..365526 | TCONS_00069724-exon-scaffold_506-1491911889:364985..365526 | Clytia hemisphaerica | exon |
| TCONS_00069724-exon-scaffold_506-1491911889:364546..364894 | TCONS_00069724-exon-scaffold_506-1491911889:364546..364894 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_506 | supercontig | scaffold_506:364546..365526 - |
Blast
The following BLAST results are available for this feature:
|
