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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069713 ID=TCONS_00069713|Name=TCONS_00069713|organism=Clytia hemisphaerica|type=transcript|length=537bp
CAAGAACTTCAATTACAGGAAATTTTCTACAGTTGTAAAGTAAAAATCAG
ATCGCATACACACAAAAAGGATTATTTTTTGAACAGATACAGAGGAATTT
CATAGGTTTTTTATACAATAATCCAATAAAATGGATAATGGAAAAAGCAC
GAGAACATTTTCTCCTAAAGTTCATTTAAGAGATGCAGTTCGTAAAGCAT
ATCAACCGCCTAAATCTCTAGCGTTGATACGTTTGTTAGATCGTATTCAC
AGAAATGAAACTCCAGGCAGTGGAAAAGATGCGGAAATTACATCAATGGA
AAATCAACGCGAAATATTGAAGAAGAAGATTCAACGGCGTAGAGCAATGA
TGAAAAACAAATTACGTGTTGCCGTTCATTCGGCAAACAGGgagcaaaaa
gttgaaaagatatGTTACAAGAAATACTTTCAAACGATGGCAAGAAGGGT
AAGGatattactcttaggtgccaaataaacgggccccccccgcttgttaa
tttttcgaaaattttccaacccccccggaccttatta Run BLAST on NCBI transcript from alignment at scaffold_506:211252..212451- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069713 ID=TCONS_00069713|Name=TCONS_00069713|organism=Clytia hemisphaerica|type=transcript|length=1200bp|location=Sequence derived from alignment at scaffold_506:211252..212451- (Clytia hemisphaerica)
CAAGAACTTCAATTACAGGAAATTTTCTACAGTTGTAAAGTAAAAATCAG
ATCGCATACACACAAAAAGGATTATTTTTTGAACAGATACAGAGGAATTT
CATAGGTTTTTTATACAATAATCCAATAAAATGGATAATGGAAAAAGCAC
GAGAACATTTTCTCCTAAAGTTCATTTAAGAGATGCAGTTCGTAAAGCAT
ATCAACCGCCTAAATCTCTAGCGTTGATACGTTTGTTAGATCGTATTCAC
AGAAATGAAACTCCAGGCAGTGGAAAAGATGCGGAAATTACATCAATGGA
AAATCAACGCGAAATATTGAAGAAGAAGATTCAACGGCGTAGAGCAATGA
TGAAAAACAAATTACGTGTTGCCGTTCATTCGGCAAACAGGGAGCAAAAA
GTTGAAAAGATAGTAAGAGTATACTATATGTGAGATTTCTATGCTTTTGA
GTAGTTTTAGTACAAATGCTTAAAGTGATAATCAGATGGTTTGAGATATT
TGGCCGGCAGAAAGCTTATGGACTTGAGTAAAACCTCCAAGTCTGTTTGG
GTAACTATTTTCCAAAGTCAAGATATCGCAGTTTGAAATTTCTGAAAATG
GGTTCCCACACGGTTCTTACGCTGGAATTGTATCGTTTTCTTATTAAAAG
CCAAAAACTAGTAATTTAGATATCTCGACTTTGGAAAATATTTAGGTAAA
AATATTTTGAGGTATTGCTCAGGACAATAGAAAGATTACACATGCCAAAT
ATCTCAAACCATCTGATTATCCCTTTAATTTCGATTTAGTTCAATAGATT
CTGCTCTGCAATTAATTTATTATATATCACATTTTTTAGAGAAAAGACTA
CTGAGTAAGACTAGAAGACTAGTAAACTATAATGCGCAGCAGTGTAGGTG
CAGCGGGTCCATTTAGGGCGCCGAAAGAAAAGGGGTACAGAAAATGCTCC
TCGGGTTAGTAATCTCGGCGCCCCTTTCCCACAGACAACGGACTCTTAGA
CGAAAATTTATACCAAAATATTCTTGAGGTGGTTATCTATTATTATAGAA
GTATTATGTATTTTATTCTTTTTAGTGTTACAAGAAATACTTTCAAACGA
TGGCAAGAAGGGTAAGGATATTACTCTTAGGTGCCAAATAAACGGGCCCC
CCCCGCTTGTTAATTTTTCGAAAATTTTCCAACCCCCCCGGACCTTATTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069713-exon-scaffold_506-1575043694:212040..212451 | TCONS_00069713-exon-scaffold_506-1575043694:212040..212451 | Clytia hemisphaerica | exon |
| TCONS_00069713-exon-scaffold_506-1575043694:211252..211376 | TCONS_00069713-exon-scaffold_506-1575043694:211252..211376 | Clytia hemisphaerica | exon |
| TCONS_00069713-exon-scaffold_506-1510915933:212040..212451 | TCONS_00069713-exon-scaffold_506-1510915933:212040..212451 | Clytia hemisphaerica | exon |
| TCONS_00069713-exon-scaffold_506-1510915933:211252..211376 | TCONS_00069713-exon-scaffold_506-1510915933:211252..211376 | Clytia hemisphaerica | exon |
| TCONS_00069713-exon-scaffold_506-1491911889:212040..212451 | TCONS_00069713-exon-scaffold_506-1491911889:212040..212451 | Clytia hemisphaerica | exon |
| TCONS_00069713-exon-scaffold_506-1491911889:211252..211376 | TCONS_00069713-exon-scaffold_506-1491911889:211252..211376 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_506 | supercontig | scaffold_506:211252..212451 - |
Blast
The following BLAST results are available for this feature:
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