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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069688 ID=TCONS_00069688|Name=TCONS_00069688|organism=Clytia hemisphaerica|type=transcript|length=5794bp TCTCAGAAAGAAAGTCTTAACGTCAGCACTTTTTAGATATCACTATATAT AAAGTTCAATAAATTGAAACGAATTTAAAACGTATTATGATTTGAAgaga agaaaatatcaaaaaaaaatttacacttcGAAAGAAGGGCTTTTTACATT CGTGGCAGAATACAGCATGTTTGAAAATGTTGCTTGGTGGATCCAGAACT AAAGCtgagatcaaaacaaaaaacaaagctGATTTCCGTTTGAAAAGGGT CGATATTACGACTCAGGAGTCTATTTCTCAAATCAAGTTTACATACGATG ATGAGAGTATTTGGTGCTATGGGCCCGATCGTGGAACAAAATCCAATCGA CCAATAATTCTATACGAGGGAGAATATTTAGTTCGAGTCAGCCATGAACG GCTTTATGATTACGCATGCGCTGGAGCATTGGTTGAGTTCGAAACAAACA AAGGGCGTGTGTTTCATTACACCCCTGGTAATTCATGGCGTGGATATGCA ACAGGCTGGAAAAGCGAGACAACAACAGTCAAAGTTGAAAACGGTATGGA AATCATCAGTTTGGTGATTAAGCGAGGCATTTTAATCGGTGTCGAGCAAC AACCTATAGTTGAGAAAAATGAAGGACAAACTAAACAAAAAGAATGGTAC GTGAGTTGTTATTCTGCAGGGAAAGAAGACATAGATCTCAATCATaaaga ttcaaaagaaaaaaatgaagaagttgTTTTCAAACATTTCGACACCAAAA AGGAAGCACTAAAACATTGGAATGAACTACAAAGATTggtgatgaagaaa aaagaaagaggagCCATGCTGGTTGATTGCTTATCAGTTAAGATTGTCAA ACAGGCAGGATCGGAAGAGATTGTCAAGACATGTAAAGAAAAAGCAATGG AGAAAGGATTCTACTCAAAAGATGAATCCAACCAATCCATCTTCAAAATG ATTTGGTTAATGTATTGCACCATAATGGATACAagagatattttcttttt catcctTAGCATTTTACTGAAATCATTGAATAATCTTCTCGATGTTCATT TGCAGTTCATTAAAGGTAGTATATTGGCTTTACTGGTATCGACTTTCAAC TCAGGACCACTTGAAGGTGACATTTATGTGAAATTGACATGCGATTATGT TTATGATTGTGATTCTGAAGACCCATTGAGTGTCGGTAGAGCCCTCTTAC TTGCTGGATGTATCGTGAAATTTGCATCTATCTTATTGGAGATTGGCGAG CTTTATATTGAGGAGAATTTAAACTCATGTCGTAAACTGCAGATGAAAAG GAACATTCTGGAGCATGTGAGCAAATTAGATCAAGCATTTTATGATGTCC ATTCAACCAGCCACGTCACTGAATCGATGAGTATTGAATCGATATATCAT CTGGCTACAGAATCGATTCCCAACATGATTCAAACGGTTATAACAATCCT GTTGAACCTATTCTACATCATTAAGATTGATCTCTACTTGGGTGGTTTCA CAGTTTTCATCTCCACATTCAACACCACTTTCATTGTCCGTAAATTCATC ACAAAACTCCAGAAATCTTATAAATTCGAATGGAAATGGGATTCAGCGTT AAGTGACATTAAATCGAAATTCACTGataatttaaaaacaacaaaaatgt tttcatctGAAGGTAAACATTTGAATGAATATGACCAAGTGAACAATGAG TGTGTATCAAGTCTGGAATCCAAAACTGTGGTTCTCTGCTTTTATgtcat tttccaagaaatgaCTGGATTTATCGCTTTCGCTTTCAGCATATATGTCT TCTTAGGACATTTAAAAGAAGCAAAACTAACGTCAGCTGAAATAACAAGT TTTTTCTTTCTGATGCAAACTTTCAGTAGTCACTTTAATTGGTTTTTCTC CCAAGATGAGTATATTCGACAGGATATCAGAGATTTAGATAAATTCATTC GTTTGAAGAATCAAGTTCCTGGTATGATTGATGGCGATGAAGTGATTGAA GATTTGAAAGGAGAAATTATTTTCGAAGATGTTGATTTCTCCTACCCTTC TCGTCCTTTGGAACCTGTTTTGAAGAAGTTCAATCTGAAAATACAACCCA ATAAGATGACAGCTATCGTTGGTGACTCTGGTGCAGGTAAATCAACTATT GGCAATTTGATCATGCGATTATACGATCCAACTTCTGGGAAGATTACAGT CGATGGTCGAGATATGAAATCACTGTGTCTTCAAAAACTTCATGAGAAAA TGGGGATCGTAACACAAAATCCTGATTTAATGGAAGGAACTTTAGAAGAA AATATCGGGTATGGTTCAGTCGAAGACTTTTGCAGTCGCAAAGACGTCGA GAGAGCTGCCCAGCTAGCTAAGTGTGATTTCATCGATAAATTTCGTTCAG GCTATGACACATATGCTGGAGGTTCAGGAATGCAGTTATCTGGTGGACAA AAACAAAGATTGGCCATTGCACGTGCTATCATTCGAAATCCAAAGATATT GGTGTTAGATGAAGCAACTTCTTCATTAgatgctaaaaatgaaaaagaag ttcAAGAAGCTCTTGAGAATGTGATGGATTCTCAAACAGTGGTTGTCATT GCGCATCGTTTGAGTACCATTAAAAATGCTGATAATATCGTTTGCATGAA AGACGGTACAATTGTTGAGCAAGGTACCCATGATGAGTTGATGAAGACAA AAGGTacttattttgatttgatttccaAACAATTGGTTTCTGCAGAACAA ACGAAAACAAGTGATGAATCAGATAAGCACGAAAGTGGTTAGATTCGTCA ATGATTTGATACGAGAACTTCGTAGCATATAAAATTTAACatatattggg ctcttccagaaaaaattcgttcatggaggtggaggatatattattttgtc tgtgatctacccctggacatttcgatttttcaccccctggacacgtgttt tacccctggacaagcatcaaattgaccccctggacacaatATTTACCCCT CGACATCGCAGATTCACCCTatggacatggcagtttttcagggttttttc aatacccctggacaatatatcctccaccccccatgaatggtttttttctg gaagagcccatttcagGATTTTCTTTTACTATTTTGGAATATTTAATACT CCTAGATAAGCACGAGAGTTGTTGATATTACAACTTATTGGACAAACTCT ATCAACCTTACTTAAAGTTTGTACATAGAACGTCAAATTATTATATTGGT CGATTTTATATAGTGATAACTATTTAACCATATATTTTCGTCCCTAGCTA GTCTCTAAAAATTGTCTACAGGCTTTATCTACTTCCGGGGGATACTAGGT TTGTGAGGTGACAGGTATGTCCgggccaaaaatcaaaaattgacccttag agagaggaaaaattggcgtttttggaACCCTTAGAAAGAGaactttctca aaatttttatcgattttcactcgatttttgtccaaattttggaaaatcac gaCTCTTTGAGtgaggaaattttgaatttcgtgatttttagacccttaca gagactcacttttctttttaatggtttttgtacccctctTAGGAACTTTC GAGAGTGGGTAGAAGgaacccttatggctcgcacatacccagcacccatt ttgcctaagtatccaACGGATCTACTTTCCGAATGTAGGAAATCAAGAAT ATGACCTCTTACATATGTTTTGCCAATTGTACTCATTTATATTACACCTC ATACGTGAGTTCCACAAATAggttaccctctttgatttgatatttagGCA GtagtaaaaagatttttccaaaattgtttccGAATCGTTCAAAGGGAATC CTGACTTAAATTTGGTGTattgctttttaattttacttcattggttcaaa agatatgttcaaaaatctaaaatgaatgatgaaagtttttaaaaaaaaag acagaaaaaGGCGAAAAACGAGAGTATTATATTGATTGTAATAAATAGAG GCACAAAACGATTTTATGCATCAGGAAATGTATTTCCATTATGTAAAAAG CACTTATTTACAAGATTACGCATCCCTGTAAATACATTCCATCATCTGTG AATCGAGATGAGCTGCAACAGTTCAAACGAAGcatttttgtcaaaacttt CACCTTCTCCACCTTTCTCAACGATGATGCACACACAGAAAAGCTTTTGG AAACTCTTGggaagatgttgaaaattttgcggGGTTTGAAGCATTCGGCA TCTTGTTTATGCCCAAGGGAAAAAcagaagtaaaaaaagacaatagagat aaagaaaatataaagagtATTACAAGGAGCAAGAATTTATACTTTAATGT TTTGGTAAAAGAGAAGTCGTTTCTCTCATAAATTGATACCcttgttttta gccttttttgacattttttaaaattgacatttttggtttttgaacATAGC TTTTGAACCATTGAggtaaaattaaaaagcaatacaccaaattttaagtt aggatttcctctgaatgattccgaaacaatttttgaaaaatctttttgct actgcctacaatatcaaatcaaagagggtaacttatctgtggcacacccg gtaagATATGTAAGCAGCTCTTCTatccaattcaaaattttttcttatta ttttatAAGTATTGTAAATAATTACTGATATAGTCAAAGAGTGAAAAATA ATTGCACTGATTAcaaataataaacaaaatttACGATGTCAAACTTAACA TGAACTAAACATTAAGgatgataaaattttgattacATGACTATTATAAT GTGAAATGAATAACATTGGCAAATAAAACTTGCCAtagaaattacaaaaa tattaaaaagcccaattctgtaaaaatatttttgtacaatttACCATATC ATTCAAAATCCctgatttttttgcaaagttttgatAGAGTCAATATCTCA ATAGTTTTCACGGTGTTCACGGCCGTAGCGTGGTGGCCGATCGTTTTTGG ACCAACCCCCCTCCTGGTGCGCCGAAAGACAAGGGGCACGAAAAGGCGCC TCTGATTACTAACTTCAGCGCCCAtttgcttttttacaccttagaattag cagttttcagcctaaaagAGAACGGATACCAAAAAATCCCTGATTGCTTC GGCTTCTTTTGCATAATTTTTaccaatatattttattttgcatTAAAGGC CCTAAAATCCAAACTTACGAAAATTGCCTCCCTAGTTTGCCCTAACTTTA ATCGAACCCATCACGCTACTGGTTCACAGCCAGCCGGCTTTGGTATCTAA GAAGAAACTGAGCATTAGGAAGAGCGGGATTTCGATACGGGTACCCCTGG TTTATTGCGCTGTCGGCCTAGACGACTCAACCATCGCTCTTTGAAGGGAT CGTTACCTGCATATCCGGGTGGATTTTCGGCTTTTTTTAAACAACAACAC TTGATTTTCTAGACATCTAGCtgttcgggctttataaatctgtgataCTG ATACCAAACATCACCATACGTCATAACAACGTTCATTGACACCTAAGATA GGGTTTGTTGGATATAGAGTTTTGTATGTGCACTGAAGTCATCgtatttg aagaaaatgttaatgaaaatgcttccaATCCAAATCCATTCACTGATTTA CTTCAATAATTCCCATCCATTCAAATGTTCCTTCGTTCCTTCCTTCCTTC CTtccttcattcattcattcattcattcaggGGAAGGTTTGATAACGCAT TTACTCAAAGAAACGAAGCACTCTATCGTCTTTGAAGTAAACCT Run BLAST on NCBI protein sequence of TCONS_00069688-protein >TCONS_00069688-protein ID=TCONS_00069688-protein|Name=TCONS_00069688-protein|organism=Clytia hemisphaerica|type=polypeptide|length=871bp
MLLGGSRTKAEIKTKNKADFRLKRVDITTQESISQIKFTYDDESIWCYGP DRGTKSNRPIILYEGEYLVRVSHERLYDYACAGALVEFETNKGRVFHYTP GNSWRGYATGWKSETTTVKVENGMEIISLVIKRGILIGVEQQPIVEKNEG QTKQKEWYVSCYSAGKEDIDLNHKDSKEKNEEVVFKHFDTKKEALKHWNE LQRLVMKKKERGAMLVDCLSVKIVKQAGSEEIVKTCKEKAMEKGFYSKDE SNQSIFKMIWLMYCTIMDTRDIFFFILSILLKSLNNLLDVHLQFIKGSIL ALLVSTFNSGPLEGDIYVKLTCDYVYDCDSEDPLSVGRALLLAGCIVKFA SILLEIGELYIEENLNSCRKLQMKRNILEHVSKLDQAFYDVHSTSHVTES MSIESIYHLATESIPNMIQTVITILLNLFYIIKIDLYLGGFTVFISTFNT TFIVRKFITKLQKSYKFEWKWDSALSDIKSKFTDNLKTTKMFSSEGKHLN EYDQVNNECVSSLESKTVVLCFYVIFQEMTGFIAFAFSIYVFLGHLKEAK LTSAEITSFFFLMQTFSSHFNWFFSQDEYIRQDIRDLDKFIRLKNQVPGM IDGDEVIEDLKGEIIFEDVDFSYPSRPLEPVLKKFNLKIQPNKMTAIVGD SGAGKSTIGNLIMRLYDPTSGKITVDGRDMKSLCLQKLHEKMGIVTQNPD LMEGTLEENIGYGSVEDFCSRKDVERAAQLAKCDFIDKFRSGYDTYAGGS GMQLSGGQKQRLAIARAIIRNPKILVLDEATSSLDAKNEKEVQEALENVM DSQTVVVIAHRLSTIKNADNIVCMKDGTIVEQGTHDELMKTKGTYFDLIS KQLVSAEQTKTSDESDKHESG Run BLAST on NCBI transcript from alignment at scaffold_506:117305..123533+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069688 ID=TCONS_00069688|Name=TCONS_00069688|organism=Clytia hemisphaerica|type=transcript|length=6229bp|location=Sequence derived from alignment at scaffold_506:117305..123533+ (Clytia hemisphaerica) TCTCAGAAAGAAAGTCTTAACGTCAGCACTTTTTAGATATCACTATATAT
AAAGTTCAATAAATTGAAACGAATTTAAAACGTATTATGATTTGAAgaga
agaaaatatcaaaaaaaaatttacacttcGAAAGAAGGGCTTTTTACATT
CGTGGCAGAATACAGCATGTTTGAAAATGTTGCTTGGTGGATCCAGAACT
AAAGCtgagatcaaaacaaaaaacaaagctGATTTCCGTTTGAAAAGGGT
CGATATTACGACTCAGGAGTCTATTTCTCAAATCAAGTTTACATACGATG
ATGAGAGTATTTGGTGCTATGGGCCCGATCGTGGAACAAAATCCAATCGA
CCAATAATTCTATACGAGGGAGAATATTTAGTTCGAGTCAGCCATGAACG
GCTTTATGATTACGCATGCGCTGGAGCATTGGTTGAGTTCGAAACAAACA
AAGGGCGTGTGTTTCATTACACCCCTGGTAATTCATGGCGTGGATATGCA
ACAGGCTGGGAAAGCGAGACAACAACAGTCAAAGTTGAAAACGGTATGGA
AATCATCAGTTTGNATGCAACAGGCTGGAAAAGCGAGACAACAACAGTCA
AAGTTGAAAACGGTATGGAAATCATCAGTTTGGTGATTAAGCGAGGCATT
TTAATCGGTGTCGAGCAACAACCTATAGTTGAGAAAAATGAAGGACAAAC
TAAACAAAAAGAATGGTACGTGAGTTGTTATTCTGCAGGGAAAGAAGACA
TAGATCTCAATCATaaagattcaaaagaaaaaaatgaagaagttgTTTTC
AAACATTTCGACACCAAAAAGGAAGCACTAAAACATTGGAATGAACTACA
AAGATTggtgatgaagaaaaaagaaagaggagCCATGCTGGTTGATTGCT
TATCAGTTAAGATTGTCAAACAGGCAGGATCGGAAGAGATTGTCAAGACA
TGTAAAGAAAAAGCAATGGAGAAAGGATTCTACTCAAAAGATGAATCCAA
CCAATCCATCTTCAAAATGATTTGGTTAATGTATTGCACCATAATGGATA
CAagagatattttctttttcatcctTAGCATTTTACTGAAATCATTGAAT
AATCTTCTCGATGTTCATTTGCAGTTCATTAAAGGTAGTATATTGGCTTT
ACTGGTATCGACTTTCAACTCAGGACCACTTGAAGGTGACATTTATGTGA
AATTGACATGCGATTATGTTTATGATTGTGATTCTGAAGACCCATTGAGT
GTCGGTAGAGCCCTCTTACTTGCTGGATGTATCGTGAAATTTGCATCTAT
CTTATTGGAGATTGGCGAGCTTTATATTGAGGAGAATTTAAACTCATGTC
GTAAACTGCAGATGAAAAGGAACATTCTGGAGCATGTGAGCAAATTAGAT
CAAGCATTTTATGATGTCCATTCAACCAGCCACGTCACTGAATCGATGAG
TATTGAATCGATATATCATCTGGCTACAGAATCGATTCCCAACATGATTC
AAACGGTTATAACAATCCTGTTGAACCTATTCTACATCATTAAGATTGAT
CTCTACTTGGGTGGTTTCACAGTTTTCATCTCCACATTCAACACCACTTT
CATTGTCCGTAAATTCATCACAAAACTCCAGAAATCTTATAAATTCGAAT
GGAAATGGGATTCAGCGTTAAGTGACATTAAATCGAAATTCACTGataat
ttaaaaacaacaaaaatgttttcatctGAAGGTAAACATTTGAATGAATA
TGACCAAGTGAACAATGAGTGTGTATCAAGTCTGGAATCCAAAACTGTGG
TTCTCTGCTTTTATgtcattttccaagaaatgaCTGGATTTATCGCTTTC
GCTTTCAGCATATATGTCTTCTTAGGACATTTAAAAGAAGCAAAACTAAC
GTCAGCTGAAATAACAAGTTTTTTCTTTCTGATGCAAACTTTCAGTAGTC
ACTTTAATTGGTTTTTCTCCCAAGATGAGTATATTCGACAGGATATCAGA
GATTTAGATAAATTCATTCGTTTGAAGAATCAAGTTCCTGGTATGATTGA
TGGCGATGAAGTGATTGAAGATTTGAAAGGAGAAATTATTTTCGAAGATG
TTGATTTCTCCTACCCTTCTCGTCCTTTGGAACCTGTTTTGAAGAAGTTC
AATCTGAAAATACAACCCAATAAGATGACAGCTATCGTTGGTGACTCTGG
TGCAGGTAAGCTTTTTAACCAAAaatcaatttatattttaacATTGTCTT
CAATTTCAATCAAGCTTGAACCTTCTCTCTCAGTAACTCATTGGTTTAAA
ATAGAACTGATCAAAATTACCAACTTTTTTCTAATCAACAGGTCCTTGAA
TTAAGTTATTATGTATATCTCTATAGATAGCTACTGGATCAAATGTACCC
AAGATTGCAGTAACTTACCTTGTCTATGAAAAATCAGGCACAACGTGCAC
TGGGTTTTCAAAATAGCTTTAGAAGCAACCAAGAATGGATACTCGTGcca
gaatttgaatttttcccTCATTCCTGTGTAACTATTTGGTTATATTTACT
TATATATCTACTATTTTCCAGGTAAATCAACTATTGGCAATTTGATCATG
CGATTATACGATCCAACTTCTGGGAAGATTACAGTCGATGGTCGAGATAT
GAAATCACTGTGTCTTCAAAAACTTCATGAGAAAATGGGGATCGTAACAC
AAAATCCTGATTTAATGGAAGGAACTTTAGAAGAAAATATCGGGTATGGT
TCAGTCGAAGACTTTTGCAGTCGCAAAGACGTCGAGAGAGCTGCCCAGCT
AGCTAAGTGTGATTTCATCGATAAATTTCGTTCAGGCTATGACACATATG
CTGGAGGTTCAGGAATGCAGTTATCTGGTGGACAAAAACAAAGATTGGCC
ATTGCACGTGCTATCATTCGAAATCCAAAGATATTGGTGTTAGATGAAGC
AACTTCTTCATTAgatgctaaaaatgaaaaagaagttcAAGAAGCTCTTG
AGAATGTGATGGATTCTCAAACAGTGGTTGTCATTGCGCATCGTTTGAGT
ACCATTAAAAATGCTGATAATATCGTTTGCATGAAAGACGGTACAATTGT
TGAGCAAGGTACCCATGATGAGTTGATGAAGACAAAAGGTacttattttg
atttgatttccaAACAATTGGTTTCTGCAGAACAAACGAAAACAAGTGAT
GAATCAGATAAGCACGAAAGTGGTTAGATTCGTCAATGATTTGATACGAG
AACTTCGTAGCATATAAAATTTAACatatattgggctcttccagaaaaaa
ttcgttcatggaggtggaggatatattattttgtctgtgatctacccctg
gacatttcgatttttcaccccctggacacgtgttttacccctggacaagc
atcaaattgaccccctggacacaatATTTACCCCTCGACATCGCAGATTC
ACCCTatggacatggcagtttttcagggttttttcaatacccctggacaa
tatatcctccaccccccatgaatggtttttttctggaagagcccatttca
gGATTTTCTTTTACTATTTTGGAATATTTAATACTCCTAGATAAGCACGA
GAGTTGTTGATATTACAACTTATTGGACAAACTCTATCAACCTTACTTAA
AGTTTGTACATAGAACGTCAAATTATTATATTGGTCGATTTTATATAGTG
ATAACTATTTAACCATATATTTTCGTCCCTAGCTAGTCTCTAAAAATTGT
CTACAGGCTTTATCTACTTCCGGGGGATACTAGGTTTGTGAGGTGACAGG
TATGTCCgggccaaaaatcaaaaattgacccttagagagaggaaaaattg
gcgtttttggaACCCTTAGAAAGAGaactttctcaaaatttttatcgatt
ttcactcgatttttgtccaaattttggaaaatcacgaCTCTTTGAGtgag
gaaattttgaatttcgtgatttttagacccttacagagactcacttttct
ttttaatggtttttgtacccctctTAGGAACTTTCGAGAGTGGGTAGAAG
gaacccttatggctcgcacatacccagcacccattttgcctaagtatcca
ACGGATCTACTTTCCGAATGTAGGAAATCAAGAATATGACCTCTTACATA
TGTTTTGCCAATTGTACTCATTTATATTACACCTCATACGTGAGTTCCAC
AAATAggttaccctctttgatttgatatttagGCAGtagtaaaaagattt
ttccaaaattgtttccGAATCGTTCAAAGGGAATCCTGACTTAAATTTGG
TGTattgctttttaattttacttcattggttcaaaagatatgttcaaaaa
tctaaaatgaatgatgaaagtttttaaaaaaaaagacagaaaaaGGCGAA
AAACGAGAGTATTATATTGATTGTAATAAATAGAGGCACAAAACGATTTT
ATGCATCAGGAAATGTATTTCCATTATGTAAAAAGCACTTATTTACAAGA
TTACGCATCCCTGTAAATACATTCCATCATCTGTGAATCGAGATGAGCTG
CAACAGTTCAAACGAAGcatttttgtcaaaactttCACCTTCTCCACCTT
TCTCAACGATGATGCACACACAGAAAAGCTTTTGGAAACTCTTGggaaga
tgttgaaaattttgcggGGTTTGAAGCATTCGGCATCTTGTTTATGCCCA
AGGGAAAAAcagaagtaaaaaaagacaatagagataaagaaaatataaag
agtATTACAAGGAGCAAGAATTTATACTTTAATGTTTTGGTAAAAGAGAA
GTCGTTTCTCTCATAAATTGATACCcttgtttttagccttttttgacatt
ttttaaaattgacatttttggtttttgaacATAGCTTTTGAACCATTGAg
gtaaaattaaaaagcaatacaccaaattttaagttaggatttcctctgaa
tgattccgaaacaatttttgaaaaatctttttgctactgcctacaatatc
aaatcaaagagggtaacttatctgtggcacacccggtaagATATGTAAGC
AGCTCTTCTatccaattcaaaattttttcttattattttatAAGTATTGT
AAATAATTACTGATATAGTCAAAGAGTGAAAAATAATTGCACTGATTAca
aataataaacaaaatttACGATGTCAAACTTAACATGAACTAAACATTAA
GgatgataaaattttgattacATGACTATTATAATGTGAAATGAATAACA
TTGGCAAATAAAACTTGCCAtagaaattacaaaaatattaaaaagcccaa
ttctgtaaaaatatttttgtacaatttACCATATCATTCAAAATCCctga
tttttttgcaaagttttgatAGAGTCAATATCTCAATAGTTTTCACGGTG
TTCACGGCCGTAGCGTGGTGGCCGATCGTTTTTGGACCAACCCCCCTCCT
GGTGCGCCGAAAGACAAGGGGCACGAAAAGGCGCCTCTGATTACTAACTT
CAGCGCCCAtttgcttttttacaccttagaattagcagttttcagcctaa
aagAGAACGGATACCAAAAAATCCCTGATTGCTTCGGCTTCTTTTGCATA
ATTTTTaccaatatattttattttgcatTAAAGGCCCTAAAATCCAAACT
TACGAAAATTGCCTCCCTAGTTTGCCCTAACTTTAATCGAACCCATCACG
CTACTGGTTCACAGCCAGCCGGCTTTGGTATCTAAGAAGAAACTGAGCAT
TAGGAAGAGCGGGATTTCGATACGGGTACCCCTGGTTTATTGCGCTGTCG
GCCTAGACGACTCAACCATCGCTCTTTGAAGGGATCGTTACCTGCATATC
CGGGTGGATTTTCGGCTTTTTTTAAACAACAACACTTGATTTTCTAGACA
TCTAGCtgttcgggctttataaatctgtgataCTGATACCAAACATCACC
ATACGTCATAACAACGTTCATTGACACCTAAGATAGGGTTTGTTGGATAT
AGAGTTTTGTATGTGCACTGAAGTCATCgtatttgaagaaaatgttaatg
aaaatgcttccaATCCAAATCCATTCACTGATTTACTTCAATAATTCCCA
TCCATTCAAATGTTCCTTCGTTCCTTCCTTCCTTCCTtccttcattcatt
cattcattcattcaggGGAAGGTTTGATAACGCATTTACTCAAAGAAACG
AAGCACTCTATCGTCTTTGAAGTAAACCT Coding sequence (CDS) from alignment at scaffold_506:117305..123533+ >TCONS_00069688 ID=TCONS_00069688|Name=TCONS_00069688|organism=Clytia hemisphaerica|type=CDS|length=7848bp|location=Sequence derived from alignment at scaffold_506:117305..123533+ (Clytia hemisphaerica) ATGTTGCTTGGTGGATCCAGAACTAAAGCtgagatcaaaacaaaaaacaa agctGATTTCCGTTTGAAAAGGGTCGATATTACGACTCAGGAGTCTATTT CTCAAATCAAGTTTACATACGATGATGAGAGTATTTGGTGCTATGGGCCC GATCGTGGAACAAAATCCAATCGACCAATAATTCTATACGAGGGAGAATA TTTAGTTCGAGTCAGCCATGAACGGCTTTATGATTACGCATGCGCTGGAG CATTGGTTGAGTTCGAAACAAACAAAGGGCGTGTGTTTCATTACACCCCT GGTAATTCATGGCGTGGATATGCAACAGGCTGGAAAAGCGAGACAACAAC AGTCAAAGTTGAAAACGGTATGGAAATCATCAGTTTGGTGATTAAGCGAG GCATTTTAATCGGTGTCGAGCAACAACCTATAGTTGAGAAAAATGAAGGA CAAACTAAACAAAAAGAATGGTACGTGAGTTGTTATTCTGCAGGGAAAGA AGACATAGATCTCAATCATaaagattcaaaagaaaaaaatgaagaagttg TTTTCAAACATTTCGACACCAAAAAGGAAGCACTAAAACATTGGAATGAA CTACAAAGATTggtgatgaagaaaaaagaaagaggagCCATGCTGGTTGA TTGCTTATCAGTTAAGATTGTCAAACAGGCAGGATCGGAAGAGATTGTCA AGACATGTAAAGAAAAAGCAATGGAGAAAGGATTCTACTCAAAAGATGAA TCCAACCAATCCATCTTCAAAATGATTTGGTTAATGTATTGCACCATAAT GGATACAagagatattttctttttcatcctTAGCATTTTACTGAAATCAT TGAATAATCTTCTCGATGTTCATTTGCAGTTCATTAAAGGTAGTATATTG GCTTTACTGGTATCGACTTTCAACTCAGGACCACTTGAAGGTGACATTTA TGTGAAATTGACATGCGATTATGTTTATGATTGTGATTCTGAAGACCCAT TGAGTGTCGGTAGAGCCCTCTTACTTGCTGGATGTATCGTGAAATTTGCA TCTATCTTATTGGAGATTGGCGAGCTTTATATTGAGGAGAATTTAAACTC ATGTCGTAAACTGCAGATGAAAAGGAACATTCTGGAGCATGTGAGCAAAT TAGATCAAGCATTTTATGATGTCCATTCAACCAGCCACGTCACTGAATCG ATGAGTATTGAATCGATATATCATCTGGCTACAGAATCGATTCCCAACAT GATTCAAACGGTTATAACAATCCTGTTGAACCTATTCTACATCATTAAGA TTGATCTCTACTTGGGTGGTTTCACAGTTTTCATCTCCACATTCAACACC ACTTTCATTGTCCGTAAATTCATCACAAAACTCCAGAAATCTTATAAATT CGAATGGAAATGGGATTCAGCGTTAAGTGACATTAAATCGAAATTCACTG ataatttaaaaacaacaaaaatgttttcatctGAAGGTAAACATTTGAAT GAATATGACCAAGTGAACAATGAGTGTGTATCAAGTCTGGAATCCAAAAC TGTGGTTCTCTGCTTTTATgtcattttccaagaaatgaCTGGATTTATCG CTTTCGCTTTCAGCATATATGTCTTCTTAGGACATTTAAAAGAAGCAAAA CTAACGTCAGCTGAAATAACAAGTTTTTTCTTTCTGATGCAAACTTTCAG TAGTCACTTTAATTGGTTTTTCTCCCAAGATGAGTATATTCGACAGGATA TCAGAGATTTAGATAAATTCATTCGTTTGAAGAATCAAGTTCCTGGTATG ATTGATGGCGATGAAGTGATTGAAGATTTGAAAGGAGAAATTATTTTCGA AGATGTTGATTTCTCCTACCCTTCTCGTCCTTTGGAACCTGTTTTGAAGA AGTTCAATCTGAAAATACAACCCAATAAGATGACAGCTATCGTTGGTGAC TCTGGTGCAGGTAAATCAACTATTGGCAATTTGATCATGCGATTATACGA TCCAACTTCTGGGAAGATTACAGTCGATGGTCGAGATATGAAATCACTGT GTCTTCAAAAACTTCATGAGAAAATGGGGATCGTAACACAAAATCCTGAT TTAATGGAAGGAACTTTAGAAGAAAATATCGGGTATGGTTCAGTCGAAGA CTTTTGCAGTCGCAAAGACGTCGAGAGAGCTGCCCAGCTAGCTAAGTGTG ATTTCATCGATAAATTTCGTTCAGGCTATGACACATATGCTGGAGGTTCA GGAATGCAGTTATCTGGTGGACAAAAACAAAGATTGGCCATTGCACGTGC TATCATTCGAAATCCAAAGATATTGGTGTTAGATGAAGCAACTTCTTCAT TAgatgctaaaaatgaaaaagaagttcAAGAAGCTCTTGAGAATGTGATG GATTCTCAAACAGTGGTTGTCATTGCGCATCGTTTGAGTACCATTAAAAA TGCTGATAATATCGTTTGCATGAAAGACGGTACAATTGTTGAGCAAGGTA CCCATGATGAGTTGATGAAGACAAAAGGTacttattttgatttgatttcc aAACAATTGGTTTCTGCAGAACAAACGAAAACAAGTGATGAATCAGATAA GCACGAAAGTGGTTAGATGTTGCTTGGTGGATCCAGAACTAAAGCtgaga tcaaaacaaaaaacaaagctGATTTCCGTTTGAAAAGGGTCGATATTACG ACTCAGGAGTCTATTTCTCAAATCAAGTTTACATACGATGATGAGAGTAT TTGGTGCTATGGGCCCGATCGTGGAACAAAATCCAATCGACCAATAATTC TATACGAGGGAGAATATTTAGTTCGAGTCAGCCATGAACGGCTTTATGAT TACGCATGCGCTGGAGCATTGGTTGAGTTCGAAACAAACAAAGGGCGTGT GTTTCATTACACCCCTGGTAATTCATGGCGTGGATATGCAACAGGCTGGA AAAGCGAGACAACAACAGTCAAAGTTGAAAACGGTATGGAAATCATCAGT TTGGTGATTAAGCGAGGCATTTTAATCGGTGTCGAGCAACAACCTATAGT TGAGAAAAATGAAGGACAAACTAAACAAAAAGAATGGTACGTGAGTTGTT ATTCTGCAGGGAAAGAAGACATAGATCTCAATCATaaagattcaaaagaa aaaaatgaagaagttgTTTTCAAACATTTCGACACCAAAAAGGAAGCACT AAAACATTGGAATGAACTACAAAGATTggtgatgaagaaaaaagaaagag gagCCATGCTGGTTGATTGCTTATCAGTTAAGATTGTCAAACAGGCAGGA TCGGAAGAGATTGTCAAGACATGTAAAGAAAAAGCAATGGAGAAAGGATT CTACTCAAAAGATGAATCCAACCAATCCATCTTCAAAATGATTTGGTTAA TGTATTGCACCATAATGGATACAagagatattttctttttcatcctTAGC ATTTTACTGAAATCATTGAATAATCTTCTCGATGTTCATTTGCAGTTCAT TAAAGGTAGTATATTGGCTTTACTGGTATCGACTTTCAACTCAGGACCAC TTGAAGGTGACATTTATGTGAAATTGACATGCGATTATGTTTATGATTGT GATTCTGAAGACCCATTGAGTGTCGGTAGAGCCCTCTTACTTGCTGGATG TATCGTGAAATTTGCATCTATCTTATTGGAGATTGGCGAGCTTTATATTG AGGAGAATTTAAACTCATGTCGTAAACTGCAGATGAAAAGGAACATTCTG GAGCATGTGAGCAAATTAGATCAAGCATTTTATGATGTCCATTCAACCAG CCACGTCACTGAATCGATGAGTATTGAATCGATATATCATCTGGCTACAG AATCGATTCCCAACATGATTCAAACGGTTATAACAATCCTGTTGAACCTA TTCTACATCATTAAGATTGATCTCTACTTGGGTGGTTTCACAGTTTTCAT CTCCACATTCAACACCACTTTCATTGTCCGTAAATTCATCACAAAACTCC AGAAATCTTATAAATTCGAATGGAAATGGGATTCAGCGTTAAGTGACATT AAATCGAAATTCACTGataatttaaaaacaacaaaaatgttttcatctGA AGGTAAACATTTGAATGAATATGACCAAGTGAACAATGAGTGTGTATCAA GTCTGGAATCCAAAACTGTGGTTCTCTGCTTTTATgtcattttccaagaa atgaCTGGATTTATCGCTTTCGCTTTCAGCATATATGTCTTCTTAGGACA TTTAAAAGAAGCAAAACTAACGTCAGCTGAAATAACAAGTTTTTTCTTTC TGATGCAAACTTTCAGTAGTCACTTTAATTGGTTTTTCTCCCAAGATGAG TATATTCGACAGGATATCAGAGATTTAGATAAATTCATTCGTTTGAAGAA TCAAGTTCCTGGTATGATTGATGGCGATGAAGTGATTGAAGATTTGAAAG GAGAAATTATTTTCGAAGATGTTGATTTCTCCTACCCTTCTCGTCCTTTG GAACCTGTTTTGAAGAAGTTCAATCTGAAAATACAACCCAATAAGATGAC AGCTATCGTTGGTGACTCTGGTGCAGGTAAATCAACTATTGGCAATTTGA TCATGCGATTATACGATCCAACTTCTGGGAAGATTACAGTCGATGGTCGA GATATGAAATCACTGTGTCTTCAAAAACTTCATGAGAAAATGGGGATCGT AACACAAAATCCTGATTTAATGGAAGGAACTTTAGAAGAAAATATCGGGT ATGGTTCAGTCGAAGACTTTTGCAGTCGCAAAGACGTCGAGAGAGCTGCC CAGCTAGCTAAGTGTGATTTCATCGATAAATTTCGTTCAGGCTATGACAC ATATGCTGGAGGTTCAGGAATGCAGTTATCTGGTGGACAAAAACAAAGAT TGGCCATTGCACGTGCTATCATTCGAAATCCAAAGATATTGGTGTTAGAT GAAGCAACTTCTTCATTAgatgctaaaaatgaaaaagaagttcAAGAAGC TCTTGAGAATGTGATGGATTCTCAAACAGTGGTTGTCATTGCGCATCGTT TGAGTACCATTAAAAATGCTGATAATATCGTTTGCATGAAAGACGGTACA ATTGTTGAGCAAGGTACCCATGATGAGTTGATGAAGACAAAAGGTactta ttttgatttgatttccaAACAATTGGTTTCTGCAGAACAAACGAAAACAA GTGATGAATCAGATAAGCACGAAAGTGGTTAGATGTTGCTTGGTGGATCC AGAACTAAAGCtgagatcaaaacaaaaaacaaagctGATTTCCGTTTGAA AAGGGTCGATATTACGACTCAGGAGTCTATTTCTCAAATCAAGTTTACAT ACGATGATGAGAGTATTTGGTGCTATGGGCCCGATCGTGGAACAAAATCC AATCGACCAATAATTCTATACGAGGGAGAATATTTAGTTCGAGTCAGCCA TGAACGGCTTTATGATTACGCATGCGCTGGAGCATTGGTTGAGTTCGAAA CAAACAAAGGGCGTGTGTTTCATTACACCCCTGGTAATTCATGGCGTGGA TATGCAACAGGCTGGAAAAGCGAGACAACAACAGTCAAAGTTGAAAACGG TATGGAAATCATCAGTTTGGTGATTAAGCGAGGCATTTTAATCGGTGTCG AGCAACAACCTATAGTTGAGAAAAATGAAGGACAAACTAAACAAAAAGAA TGGTACGTGAGTTGTTATTCTGCAGGGAAAGAAGACATAGATCTCAATCA TaaagattcaaaagaaaaaaatgaagaagttgTTTTCAAACATTTCGACA CCAAAAAGGAAGCACTAAAACATTGGAATGAACTACAAAGATTggtgatg aagaaaaaagaaagaggagCCATGCTGGTTGATTGCTTATCAGTTAAGAT TGTCAAACAGGCAGGATCGGAAGAGATTGTCAAGACATGTAAAGAAAAAG CAATGGAGAAAGGATTCTACTCAAAAGATGAATCCAACCAATCCATCTTC AAAATGATTTGGTTAATGTATTGCACCATAATGGATACAagagatatttt ctttttcatcctTAGCATTTTACTGAAATCATTGAATAATCTTCTCGATG TTCATTTGCAGTTCATTAAAGGTAGTATATTGGCTTTACTGGTATCGACT TTCAACTCAGGACCACTTGAAGGTGACATTTATGTGAAATTGACATGCGA TTATGTTTATGATTGTGATTCTGAAGACCCATTGAGTGTCGGTAGAGCCC TCTTACTTGCTGGATGTATCGTGAAATTTGCATCTATCTTATTGGAGATT GGCGAGCTTTATATTGAGGAGAATTTAAACTCATGTCGTAAACTGCAGAT GAAAAGGAACATTCTGGAGCATGTGAGCAAATTAGATCAAGCATTTTATG ATGTCCATTCAACCAGCCACGTCACTGAATCGATGAGTATTGAATCGATA TATCATCTGGCTACAGAATCGATTCCCAACATGATTCAAACGGTTATAAC AATCCTGTTGAACCTATTCTACATCATTAAGATTGATCTCTACTTGGGTG GTTTCACAGTTTTCATCTCCACATTCAACACCACTTTCATTGTCCGTAAA TTCATCACAAAACTCCAGAAATCTTATAAATTCGAATGGAAATGGGATTC AGCGTTAAGTGACATTAAATCGAAATTCACTGataatttaaaaacaacaa aaatgttttcatctGAAGGTAAACATTTGAATGAATATGACCAAGTGAAC AATGAGTGTGTATCAAGTCTGGAATCCAAAACTGTGGTTCTCTGCTTTTA TgtcattttccaagaaatgaCTGGATTTATCGCTTTCGCTTTCAGCATAT ATGTCTTCTTAGGACATTTAAAAGAAGCAAAACTAACGTCAGCTGAAATA ACAAGTTTTTTCTTTCTGATGCAAACTTTCAGTAGTCACTTTAATTGGTT TTTCTCCCAAGATGAGTATATTCGACAGGATATCAGAGATTTAGATAAAT TCATTCGTTTGAAGAATCAAGTTCCTGGTATGATTGATGGCGATGAAGTG ATTGAAGATTTGAAAGGAGAAATTATTTTCGAAGATGTTGATTTCTCCTA CCCTTCTCGTCCTTTGGAACCTGTTTTGAAGAAGTTCAATCTGAAAATAC AACCCAATAAGATGACAGCTATCGTTGGTGACTCTGGTGCAGGTAAATCA ACTATTGGCAATTTGATCATGCGATTATACGATCCAACTTCTGGGAAGAT TACAGTCGATGGTCGAGATATGAAATCACTGTGTCTTCAAAAACTTCATG AGAAAATGGGGATCGTAACACAAAATCCTGATTTAATGGAAGGAACTTTA GAAGAAAATATCGGGTATGGTTCAGTCGAAGACTTTTGCAGTCGCAAAGA CGTCGAGAGAGCTGCCCAGCTAGCTAAGTGTGATTTCATCGATAAATTTC GTTCAGGCTATGACACATATGCTGGAGGTTCAGGAATGCAGTTATCTGGT GGACAAAAACAAAGATTGGCCATTGCACGTGCTATCATTCGAAATCCAAA GATATTGGTGTTAGATGAAGCAACTTCTTCATTAgatgctaaaaatgaaa aagaagttcAAGAAGCTCTTGAGAATGTGATGGATTCTCAAACAGTGGTT GTCATTGCGCATCGTTTGAGTACCATTAAAAATGCTGATAATATCGTTTG CATGAAAGACGGTACAATTGTTGAGCAAGGTACCCATGATGAGTTGATGA AGACAAAAGGTacttattttgatttgatttccaAACAATTGGTTTCTGCA GAACAAACGAAAACAAGTGATGAATCAGATAAGCACGAAAGTGGTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00069688-exon-scaffold_506-1491911889:117305..117808 | TCONS_00069688-exon-scaffold_506-1491911889:117305..117808 | Clytia hemisphaerica | exon |
TCONS_00069688-exon-scaffold_506-1510915933:117305..117808 | TCONS_00069688-exon-scaffold_506-1510915933:117305..117808 | Clytia hemisphaerica | exon |
TCONS_00069688-exon-scaffold_506-1575043694:117305..117808 | TCONS_00069688-exon-scaffold_506-1575043694:117305..117808 | Clytia hemisphaerica | exon |
TCONS_00069688-exon-scaffold_506-1491911889:117878..119509 | TCONS_00069688-exon-scaffold_506-1491911889:117878..119509 | Clytia hemisphaerica | exon |
TCONS_00069688-exon-scaffold_506-1510915933:117878..119509 | TCONS_00069688-exon-scaffold_506-1510915933:117878..119509 | Clytia hemisphaerica | exon |
TCONS_00069688-exon-scaffold_506-1575043694:117878..119509 | TCONS_00069688-exon-scaffold_506-1575043694:117878..119509 | Clytia hemisphaerica | exon |
TCONS_00069688-exon-scaffold_506-1491911889:119876..123533 | TCONS_00069688-exon-scaffold_506-1491911889:119876..123533 | Clytia hemisphaerica | exon |
TCONS_00069688-exon-scaffold_506-1510915933:119876..123533 | TCONS_00069688-exon-scaffold_506-1510915933:119876..123533 | Clytia hemisphaerica | exon |
TCONS_00069688-exon-scaffold_506-1575043694:119876..123533 | TCONS_00069688-exon-scaffold_506-1575043694:119876..123533 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_506 | supercontig | scaffold_506:117305..123533 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0016887 | ATPase activity |
GO:0005524 | ATP binding |
GO:0042626 | ATPase activity, coupled to transmembrane movement of substances |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
GO:0006810 | transport |
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0055085 |
transmembrane transport |
biological_process |
GO:0006810 |
transport |
cellular_component |
GO:0016021 |
integral component of membrane |
molecular_function |
GO:0016887 |
ATPase activity |
molecular_function |
GO:0042626 |
ATPase activity, coupled to transmembrane movement of substances |
molecular_function |
GO:0005524 |
ATP binding |
Blast
BLAST of TCONS_00069688 vs. Swiss-Prot (Human)
Match: ABCB8 (ATP-binding cassette sub-family B member 8, mitochondrial OS=Homo sapiens GN=ABCB8 PE=1 SV=3) HSP 1 Score: 246.514 bits (628), Expect = 1.236e-67 Identity = 153/406 (37.68%), Postives = 230/406 (56.65%), Query Frame = 3
Query: 1629 NLKTTKMFSSEGKHLNEYDQVNNECVSSLE--SKTVVLCFYVIFQEMTGFIAFAFSIY--VFLGH--LKEAKLTSAEITSFFFLMQTFS---SHFNWFFSQDEYIRQDIRDLDKFIRLKNQVPGMIDGDEVI--EDLKGEIIFEDVDFSYPSRPLEPVLKKFNLKIQPNKMTAIVGDSGAGKSTIGNLIMRLYDPTSGKITVDGRDMKSLCLQKLHEKM-GIVTQNPDLMEGTLEENIGYGSVEDFCSRKDVERAAQLAKC-DFIDKFRSGYDTYAGGSGMQLSGGQKQRLAIARAIIRNPKILVLDEATSSLDAKNEKEVQEALENVMDSQTVVVIAHRLSTIKNADNIVCMKDGTIVEQGTHDELMKTKGTYFDLISKQLVSAEQTKT-------SDESDKHES 2786
N++T + F+ E + Y C E + + L FQ ++ IAF + +F+G + +LT ++ SF QT ++ + F Q + +++ L +P + G + E L+G + F++V FSYP RP VLK F L + P K+ A+VG SG GK+T+ +L+ R YDPT+G + +DGRD+++L L ++ G ++Q P L T+ ENI +G +E S ++V AA+ A +FI F GY+T G G LSGGQKQRLAIARA+I+ P +L+LDEATS+LDA++E+ VQEAL+ +TV+VIAHRLST++ A IV M DG + E GTH+EL+K G Y +LI +Q + A +T S +H+S
Sbjct: 340 NVRTVRAFAMEQREEERYGAELEACRCRAEELGRGIAL-----FQGLSN-IAFNCMVLGTLFIGGSLVAGQQLTGGDLMSFLVASQTVQRSMANLSVLFGQVVRGLSAGARVFEYMALNPCIP--LSGGCCVPKEQLRGSVTFQNVCFSYPCRPGFEVLKDFTLTLPPGKIVALVGQSGGGKTTVASLLERFYDPTAGVVMLDGRDLRTLDPSWLRGQVVGFISQEPVLFGTTIMENIRFGKLE--ASDEEVYTAAREANAHEFITSFPEGYNTVVGERGTTLSGGQKQRLAIARALIKQPTVLILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRGAHCIVVMADGRVWEAGTHEELLKKGGLYAELIRRQALDAPRTAAPPPKKPEGPRSHQHKS 735
The following BLAST results are available for this feature:
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