TCONS_00069659 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069659
Unique NameTCONS_00069659
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length482

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069659 ID=TCONS_00069659|Name=TCONS_00069659|organism=Clytia hemisphaerica|type=transcript|length=482bp
aCCGTTATATCTTACTTCATATCATCCTTTGCTTGTACATATAGAACTTA
TATCTGTAAACTATAACACAATTCCCTATATAAATAAATTGTTCCTGCTG
GTAAAACAAAGTAAGctagatatttaaaaaataagaaattagtAAAATAA
GCAAACAGTTGAAGCCAAAGAAACTGGCAGAGATCCACAATCTCgaacaa
aaggttgtagacttttcaaaaatgcatgaaaaatttcaaactaagctcta
aaaacccatttttaccaGAGCTAATGctgtttttattggattttgaGCAA
ATATTTGGAAAGCAAAATTAATTTATTAGAAGTTTTAtacggaagccgag
aagggtCAACGTGCAATCTTTTCTGAaagctgtcgagatttctttcaagc
tgTTGCGTTCCCagaaactgtcgcgttcccagaaactgtcgcgttcctaa
aaactgtcgcgttcccaaaaactgtcgcgttc
Run BLAST on NCBI

transcript from alignment at scaffold_503:223062..223543

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069659 ID=TCONS_00069659|Name=TCONS_00069659|organism=Clytia hemisphaerica|type=transcript|length=482bp|location=Sequence derived from alignment at scaffold_503:223062..223543 (Clytia hemisphaerica)
gaacgcgacagtttttgggaacgcgacagtttttaggaacgcgacagttt
ctgggaacgcgacagtttctGGGAACGCAAcagcttgaaagaaatctcga
cagcttTCAGAAAAGATTGCACGTTGacccttctcggcttccgtaTAAAA
CTTCTAATAAATTAATTTTGCTTTCCAAATATTTGCtcaaaatccaataa
aaacagCATTAGCTCtggtaaaaatgggtttttagagcttagtttgaaat
ttttcatgcatttttgaaaagtctacaaccttttgttcGAGATTGTGGAT
CTCTGCCAGTTTCTTTGGCTTCAACTGTTTGCTTATTTTactaatttctt
attttttaaatatctagCTTACTTTGTTTTACCAGCAGGAACAATTTATT
TATATAGGGAATTGTGTTATAGTTTACAGATATAAGTTCTATATGTACAA
GCAAAGGATGATATGAAGTAAGATATAACGGt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043374XLOC_043374Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069659-exon-scaffold_503-1491911889:223062..223543TCONS_00069659-exon-scaffold_503-1491911889:223062..223543Clytia hemisphaericaexon
TCONS_00069659-exon-scaffold_503-1510915933:223062..223543TCONS_00069659-exon-scaffold_503-1510915933:223062..223543Clytia hemisphaericaexon
TCONS_00069659-exon-scaffold_503-1575043694:223062..223543TCONS_00069659-exon-scaffold_503-1575043694:223062..223543Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_503supercontigscaffold_503:223062..223543 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.633633	1.17713	0.716553	8.23683	5.26248	2.33909	1.72058	0.896699	0.678233	0.394986	0.173099	0.0864291	0	0.295171	0.079191	0.487784	0.0999926	0.414435	0	0.502592	0.55158	0.894024	1.49013	0.139527	0.124525	0.356388	0	0.14424	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069659 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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