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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069658 ID=TCONS_00069658|Name=TCONS_00069658|organism=Clytia hemisphaerica|type=transcript|length=1357bp
TTTATTTTCCGTGTATAAACCTTATATGTAAAATATGATACAAGTTCCTA
TAACATCGTTCCAGCCGGTAAAAAGAAGGATTCTGGGTAATTAAAATATA
AGACACTTAatctaaataagtttgcgtttatcggcccagtgatattcata
ttggaagtttatcgtggaaATCACGAGAAACGAAAatccaaacgtaaatc
tcgtgatccaagccacgataaacttccaatataatataaaaaaacttgta
gaaTCAGAAAATTGCCAAGCCAAGCAACAAATAGTTGACCTAATACTGCC
AATCAGGCAAGAGTTTTCTGGCTGTATTAAACAACAAAATCTGGGCTACT
GACAGGGCATTGAAATAAACCCATCCTTTAGCAAGTATTTGGAAAGCCAa
ataaagtaattgaaaagtgTGTAACTCTTGATGCTTGTAATCTTCGGTAA
CAGCATCAGTGCAAGAATAAACATAGTTGTATTTAACGCcgataagaaaa
aataatttggttTAATTCCTTTGAAAACATGGCATTTTATCAACATTGTT
ATCACAAGAAAATGAGTGCCAGCACCAGTTACAGTTAGCCAAGAAATCCA
ACTGACTGGCCAATGAAATACCGTAGTAGCATCGTAAAGCCGAAGATGCA
TTTGCAGTGTAggttttattataagaacaaactatacaaaaaCATAAGCT
TCAATGAcccaaatattaagaacaagttaggaacATATTAAAAAGTCTTT
GTGGATTCTAAAACACCATATCTaaagaaattgcacaaaaataatcacaa
aaaGGTGAAATTGAGaccattttgaacattttttggcttaaaactcaatT
TATTGGTATTATATGCCATGCAGAGCAGCACCGTTATACTGATTGTATAa
ttatctggtactcgatgtagaaattttcttccgacacggtaaagctctga
aggtcgggaaaattttaacacctggaacctttgggttaccatttttcttt
ttttctgaaggtttctcaggcagcagagattttcatgctaaattcagtcg
ggtgcaaccgatagtcaagcaaaaagtgtaaggacggctagacacgactg
tgatgcggtacattaaacgatgactactataggtctccgatggtaCATTG
Gcccactcctttagagctttagcgtgggcggctgccaatacgccatcgga
atatcagataaattgTATAACGGCTCTGCCGCACATGACAACGCGAATTT
TGCCATGATATGTGTTCACAGATGCTTGTGATTGGAAGGATTGTAAAGAT
AATTTTATAAGGTGACCTTAGAAGATAGACTTGTAGATTATTAGAGTTGT
AGATAGG Run BLAST on NCBI protein sequence of TCONS_00069658-protein >TCONS_00069658-protein ID=TCONS_00069658-protein|Name=TCONS_00069658-protein|organism=Clytia hemisphaerica|type=polypeptide|length=101bp
MHLRLYDATTVFHWPVSWISWLTVTGAGTHFLVITMLIKCHVFKGIKPNY
FFLSALNTTMFILALMLLPKITSIKSYTLFNYFIWLSKYLLKDGFISMPC
Q Run BLAST on NCBI transcript from alignment at scaffold_503:208067..209423 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069658 ID=TCONS_00069658|Name=TCONS_00069658|organism=Clytia hemisphaerica|type=transcript|length=1357bp|location=Sequence derived from alignment at scaffold_503:208067..209423 (Clytia hemisphaerica)
CCTATCTACAACTCTAATAATCTACAAGTCTATCTTCTAAGGTCACCTTA
TAAAATTATCTTTACAATCCTTCCAATCACAAGCATCTGTGAACACATAT
CATGGCAAAATTCGCGTTGTCATGTGCGGCAGAGCCGTTATAcaatttat
ctgatattccgatggcgtattggcagccgcccacgctaaagctctaaagg
agtgggCCAATGtaccatcggagacctatagtagtcatcgtttaatgtac
cgcatcacagtcgtgtctagccgtccttacactttttgcttgactatcgg
ttgcacccgactgaatttagcatgaaaatctctgctgcctgagaaacctt
cagaaaaaaagaaaaatggtaacccaaaggttccaggtgttaaaattttc
ccgaccttcagagctttaccgtgtcggaagaaaatttctacatcgagtac
cagataatTATACAATCAGTATAACGGTGCTGCTCTGCATGGCATATAAT
ACCAATAAattgagttttaagccaaaaaatgttcaaaatggtCTCAATTT
CACCtttttgtgattatttttgtgcaatttctttAGATATGGTGTTTTAG
AATCCACAAAGACTTTTTAATATgttcctaacttgttcttaatatttggg
TCATTGAAGCTTATGtttttgtatagtttgttcttataataaaaccTACA
CTGCAAATGCATCTTCGGCTTTACGATGCTACTACGGTATTTCATTGGCC
AGTCAGTTGGATTTCTTGGCTAACTGTAACTGGTGCTGGCACTCATTTTC
TTGTGATAACAATGTTGATAAAATGCCATGTTTTCAAAGGAATTAaacca
aattattttttcttatcgGCGTTAAATACAACTATGTTTATTCTTGCACT
GATGCTGTTACCGAAGATTACAAGCATCAAGAGTTACAcacttttcaatt
actttattTGGCTTTCCAAATACTTGCTAAAGGATGGGTTTATTTCAATG
CCCTGTCAGTAGCCCAGATTTTGTTGTTTAATACAGCCAGAAAACTCTTG
CCTGATTGGCAGTATTAGGTCAACTATTTGTTGCTTGGCTTGGCAATTTT
CTGAttctacaagtttttttatattatattggaagtttatcgtggcttgg
atcacgagatttacgtttggatTTTCGTTTCTCGTGATttccacgataaa
cttccaatatgaatatcactgggccgataaacgcaaacttatttagatTA
AGTGTCTTATATTTTAATTACCCAGAATCCTTCTTTTTACCGGCTGGAAC
GATGTTATAGGAACTTGTATCATATTTTACATATAAGGTTTATACACGGA
AAATAAA Coding sequence (CDS) from alignment at scaffold_503:208067..209423 >TCONS_00069658 ID=TCONS_00069658|Name=TCONS_00069658|organism=Clytia hemisphaerica|type=CDS|length=306bp|location=Sequence derived from alignment at scaffold_503:208067..209423 (Clytia hemisphaerica)
ATGCATCTTCGGCTTTACGATGCTACTACGGTATTTCATTGGCCAGTCAG
TTGGATTTCTTGGCTAACTGTAACTGGTGCTGGCACTCATTTTCTTGTGA
TAACAATGTTGATAAAATGCCATGTTTTCAAAGGAATTAaaccaaattat
tttttcttatcgGCGTTAAATACAACTATGTTTATTCTTGCACTGATGCT
GTTACCGAAGATTACAAGCATCAAGAGTTACAcacttttcaattacttta
ttTGGCTTTCCAAATACTTGCTAAAGGATGGGTTTATTTCAATGCCCTGT
CAGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069658-exon-scaffold_503-1491911889:208067..209423 | TCONS_00069658-exon-scaffold_503-1491911889:208067..209423 | Clytia hemisphaerica | exon |
| TCONS_00069658-exon-scaffold_503-1510915933:208067..209423 | TCONS_00069658-exon-scaffold_503-1510915933:208067..209423 | Clytia hemisphaerica | exon |
| TCONS_00069658-exon-scaffold_503-1575043694:208067..209423 | TCONS_00069658-exon-scaffold_503-1575043694:208067..209423 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_503 | supercontig | scaffold_503:208067..209423 . |
Blast
The following BLAST results are available for this feature:
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