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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069654 ID=TCONS_00069654|Name=TCONS_00069654|organism=Clytia hemisphaerica|type=transcript|length=3666bp
CCAAATCACTTCCAATTCACTCAGCCGTCCTCAGAGATACAAATACATTA
ACTCGCTATTACACTCTTCCTTGCACAATTGATACAAAAAGCACATATAT
TCGATTGTCCATAATCATAAATTATTCcttatttgtttttttagtgCTTA
AAAAGAACACAAGacagtaatgaaaataaaaagagtatcgttaaaatgaa
tttgaaagaaGTACAACTCAAATTGGGAAAATTCAAAGATGATATTCAAA
AGAAGATCTTCGAAAGAGGGATCACATCATTCCAGTTACTCATTATACAA
CAATTGATATGCAATCTTATTCTAGTTGTCACTACACCTGTACATAACAT
CCAACTCAATCTACAGAGAATcaaagaatgtttacaaaatagtCAAATAT
CGGCcaatgattttattttggtaACAAATCTTTTGGAAGAGAAAGCGAAC
CATTCATCTCCTGTGATTGAATTTCGCAATGTCGTGATTCTTCTTGGATT
CGCGTtgactttattttcatttttaaacagTAAGAAATCATCCAGTACGA
TGACAAATAAAACCGCGGCTATGATCACTTCAATGGCTTTCGTTTGGATG
TtgtttagtttcaatctgtttcTTCCATTAAGAGAATCACTTGTTTCAGA
TTTTCACGGATTGGCAACTTTGATCAACCATCCTATAAACTCTATTGGTT
TGGTTATAGTTACATTGTTGAGTTTGCCATTCTCAATCGTTGCAAAATCA
CCATTTGAATCATCTGGATTGAACGTTAAAGATATCCATGATCATCTCAC
CAGGGTAACTGAAGGACGAGTCACCATAAAAGCAGAATCACTTCATCAAC
TCCAAGACTTGTATACGTTCTCTTATAACTGGACAATTTTGCTACCTTTA
TTGTTATATGTTACAGCATATGCAATGTTGTTTGTTGAACAACAAAAAGA
GGAGAAACAGAGATTCTCAAACCGTTGCCAAGAGGAAGAAGTCATTACCA
AAGGGAAAGTTCAAATGCTTTCCAAGACCTTCGAAAGCAAAACGACAAAC
AATAACACTATATTAATATCATCAACAAAATTACGAAAAACCATAAATCT
TCCAATCACCGAAGCTGAAATCAAACCAGTTCAATGTTCACCATTGATGC
AANTAACACTATATTAACATCATCAACAAAATTACGAAAAACCATAAATC
TTCCAATCACCGAAGCTGAAATCAAACCAGTTCAATGTTCACCATTGATG
CAATCTAAAGTCAAACCATCAACAACAGCTCTGGTGAATAAAGTTCGACC
AGTCAACATCACCAAACCGTTGAATGTGAATACTGATTCTGCATCCAATT
CACCTGGATCTGTCATCAAACCGTTCCCAGTAAACCAAGATTCTCCAAAT
AGTTATCCGCAATCTCTGGTGAAACCATTTGTCGTCAAAATCGAGAAATC
CACacaaactaatgatgaaatagAGAACCGACAAAACAAATTAAGGATCT
CTGAAATGAAGAACTCCTTGACCAACGGTTCAAAACCACAATCTGATGAT
GAGACCTTACAGACATTAGACACAGCAAATACCGTAAAGGCAATAACGAA
ATCAGATATTGGAGTTCACGTCAAGCCTTCTTCAGAGAGCTTCACTCAGC
AAACTTCAGTCGATATTACTGAAAACTCCTCACAGACAAAGATAATTTTG
ACAACAGAATCGAGTCAACAATACGACCCAATCCCCACCAATGACCAATT
CCAACAGACCAGCATCCCGACTACCAATCTGGGTACACAATGTGAGCTAC
TATCACAAGAAAGGTATgctaaattacaaaaaagtgcTTTATCTCTTTAC
AAGAAATCAATCGAAAAACAAGAATATGTTTATTCTACGTTGCCACGAAA
AATTAACGTTGAGAGCAAAATCACCAAGTATAATAAATCAATTCAAGTCG
ATTTGAAGTTAAGCGAGGAGGATATCATTGTTAACGGACATCTTCAGAGT
CCTAAGAAAGCTCCGATCCCGGCTATCGTTACGGATACGGATTTAGAATC
GGGGACGACGATCGAGACACAGACAGATCTGTTCGGATATGTCTTGGATA
AGATTATCCAGGAACGTGAAGCAGGCAATGTTTACAGTAAACTTGATTTA
GAGAAAACAGTTCATTCCACAATTTCCATGCCCGAAAATGTTAAACAACA
CACAGAATCGATTCGTTTTAAAGCTATGAAATCACAACACGGTGTTTGGT
ACGTCTCCTTAAGAGGCGACGTTTTTCTAACCGTTGctcaaaacatttta
aagaacaTTAAACTGAATCAAGAGCTGAAAATTGAGACTGAAATATCATC
GGACATTTTACGTGCCATGAAAACATTCATTGATAATTATAATAAACTTT
CTGATTGTTTTGAAGATGACGTAGAAAGTGATGATGAGTCATTCATTAAT
GGCTTTCgattgtaaatttgaataaatatgTCATCTTCTCCGGGACTGTA
AATGGATCACTGAGTTTTCACACTGTTGCTCCAAAAAACAATCGGCGGAT
TGCAATACAATTTCTCCTGTAAAGCATATCATTCCGGACCTTgttttcaa
agtatttttaCGAAGACAAAACTTCAGTAGCCGTCATGATTAGTTTTTGT
AGGCGTTTGCGCTTTGATCAAAATAATATGGTAATAATATGGATATTTCG
TGATAAATGTTGCTTGGGGGCTTGTTCCAAATTGTTTGAAACACCGCGCC
ATTTTCAAGAAAGTTATTTCATAAACTCGCTACTGACTCGAAAGTCTAAC
GTTTATGAAAAGGGACATTATGGAAATACTTTGACCTTGTTTTAATCATG
GAAGTAGATAGTACTTTTCGATCCAGTGGCTGTTTACTACAGATGGTTAT
TATTAGGGAGGGTTTTTACGGCTGGCAGGGGAGTGAAATCTGTACATTTT
TCTTTCCGAAATGGAATTcggaaaatttgccaaaaattttAACCGAAATG
CGGAATTTAGGTTCTATGTTGGATATGGAAAAATGAGTTCTTTAGCtaga
aatttagcaaaaaaattagtttcctGAATGttctagaaaaaaattacaat
ttcaaagaaattttaaattttcgatAGGTGAAATTGCGGCTATCATTTTG
ACAAGAATTAACGAAATGGCGTAATCAGGTAACCCCCCTCCTACTTTCTC
TTTTTTACAtaaagtagaattttatttttatgacaaaaaaatacgAGCTT
CTGCTTCTGCAGAGTTATCTCCTTAAGGATCTGATAGGTTtatcaaaatt
gtaaatataaaaaagatatttttcataatttgagAGTGCTTGAAAGTTAC
ACCCCTTTGTCACagctcccactggaaaatttagcaaaaatttcgtcccc
ggtgggaaaaataccctggaatttcagccccactgagaaattgactttga
tttcatccccattcgaaactcattgtttaaaaattgcactccaaaaccat
ccccactggattttttaaccttggaacaatagaatttttatctccGCTGT
AGGGAAAAGTTTGaccggggctgtgaaacaggggtgtaatgTTATTGTGG
GAAAACACAATAGTAGTGAAAATATACAGTGAAATATTAGCACAATGAat
aaattcaatataaaaa Run BLAST on NCBI protein sequence of TCONS_00069654-protein >TCONS_00069654-protein ID=TCONS_00069654-protein|Name=TCONS_00069654-protein|organism=Clytia hemisphaerica|type=polypeptide|length=443bp
MFTIDAXNTILTSSTKLRKTINLPITEAEIKPVQCSPLMQSKVKPSTTAL
VNKVRPVNITKPLNVNTDSASNSPGSVIKPFPVNQDSPNSYPQSLVKPFV
VKIEKSTQTNDEIENRQNKLRISEMKNSLTNGSKPQSDDETLQTLDTANT
VKAITKSDIGVHVKPSSESFTQQTSVDITENSSQTKIILTTESSQQYDPI
PTNDQFQQTSIPTTNLGTQCELLSQERYAKLQKSALSLYKKSIEKQEYVY
STLPRKINVESKITKYNKSIQVDLKLSEEDIIVNGHLQSPKKAPIPAIVT
DTDLESGTTIETQTDLFGYVLDKIIQEREAGNVYSKLDLEKTVHSTISMP
ENVKQHTESIRFKAMKSQHGVWYVSLRGDVFLTVAQNILKNIKLNQELKI
ETEISSDILRAMKTFIDNYNKLSDCFEDDVESDDESFINGFRL Run BLAST on NCBI transcript from alignment at scaffold_503:128312..131977 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069654 ID=TCONS_00069654|Name=TCONS_00069654|organism=Clytia hemisphaerica|type=transcript|length=3666bp|location=Sequence derived from alignment at scaffold_503:128312..131977 (Clytia hemisphaerica)
tttttatattgaatttatTCATTGTGCTAATATTTCACTGTATATTTTCA
CTACTATTGTGTTTTCCCACAATAAcattacacccctgtttcacagcccc
ggtCAAACTTTTCCCTACAGCggagataaaaattctattgttccaaggtt
aaaaaatccagtggggatggttttggagtgcaatttttaaacaatgagtt
tcgaatggggatgaaatcaaagtcaatttctcagtggggctgaaattcca
gggtatttttcccaccggggacgaaatttttgctaaattttccagtggga
gctGTGACAAAGGGGTGTAACTTTCAAGCACTctcaaattatgaaaaata
tcttttttatatttacaattttgataAACCTATCAGATCCTTAAGGAGAT
AACTCTGCAGAAGCAGAAGCTcgtatttttttgtcataaaaataaaattc
tactttaTGTAAAAAAGAGAAAGTAGGAGGGGGGTTACCTGATTACGCCA
TTTCGTTAATTCTTGTCAAAATGATAGCCGCAATTTCACCTatcgaaaat
ttaaaatttctttgaaattgtaatttttttctagaaCATTCaggaaacta
atttttttgctaaatttctaGCTAAAGAACTCATTTTTCCATATCCAACA
TAGAACCTAAATTCCGCATTTCGGTTaaaatttttggcaaattttccgAA
TTCCATTTCGGAAAGAAAAATGTACAGATTTCACTCCCCTGCCAGCCGTA
AAAACCCTCCCTAATAATAACCATCTGTAGTAAACAGCCACTGGATCGAA
AAGTACTATCTACTTCCATGATTAAAACAAGGTCAAAGTATTTCCATAAT
GTCCCTTTTCATAAACGTTAGACTTTCGAGTCAGTAGCGAGTTTATGAAA
TAACTTTCTTGAAAATGGCGCGGTGTTTCAAACAATTTGGAACAAGCCCC
CAAGCAACATTTATCACGAAATATCCATATTATTACCATATTATTTTGAT
CAAAGCGCAAACGCCTACAAAAACTAATCATGACGGCTACTGAAGTTTTG
TCTTCGtaaaaatactttgaaaacAAGGTCCGGAATGATATGCTTTACAG
GAGAAATTGTATTGCAATCCGCCGATTGTTTTTTGGAGCAACAGTGTGAA
AACTCAGTGATCCATTTACAGTCCCGGAGAAGATGAcatatttattcaaa
tttacaatcGAAAGCCATTAATGAATGACTCATCATCACTTTCTACGTCA
TCTTCAAAACAATCAGAAAGTTTATTATAATTATCAATGAATGTTTTCAT
GGCACGTAAAATGTCCGATGATATTTCAGTCTCAATTTTCAGCTCTTGAT
TCAGTTTAAtgttctttaaaatgttttgagCAACGGTTAGAAAAACGTCG
CCTCTTAAGGAGACGTACCAAACACCGTGTTGTGATTTCATAGCTTTAAA
ACGAATCGATTCTGTGTGTTGTTTAACATTTTCGGGCATGGAAATTGTGG
AATGAACTGTTTTCTCTAAATCAAGTTTACTGTAAACATTGCCTGCTTCA
CGTTCCTGGATAATCTTATCCAAGACATATCCGAACAGATCTGTCTGTGT
CTCGATCGTCGTCCCCGATTCTAAATCCGTATCCGTAACGATAGCCGGGA
TCGGAGCTTTCTTAGGACTCTGAAGATGTCCGTTAACAATGATATCCTCC
TCGCTTAACTTCAAATCGACTTGAATTGATTTATTATACTTGGTGATTTT
GCTCTCAACGTTAATTTTTCGTGGCAACGTAGAATAAACATATTCTTGTT
TTTCGATTGATTTCTTGTAAAGAGATAAAgcacttttttgtaatttagcA
TACCTTTCTTGTGATAGTAGCTCACATTGTGTACCCAGATTGGTAGTCGG
GATGCTGGTCTGTTGGAATTGGTCATTGGTGGGGATTGGGTCGTATTGTT
GACTCGATTCTGTTGTCAAAATTATCTTTGTCTGTGAGGAGTTTTCAGTA
ATATCGACTGAAGTTTGCTGAGTGAAGCTCTCTGAAGAAGGCTTGACGTG
AACTCCAATATCTGATTTCGTTATTGCCTTTACGGTATTTGCTGTGTCTA
ATGTCTGTAAGGTCTCATCATCAGATTGTGGTTTTGAACCGTTGGTCAAG
GAGTTCTTCATTTCAGAGATCCTTAATTTGTTTTGTCGGTTCTctatttc
atcattagtttgtGTGGATTTCTCGATTTTGACGACAAATGGTTTCACCA
GAGATTGCGGATAACTATTTGGAGAATCTTGGTTTACTGGGAACGGTTTG
ATGACAGATCCAGGTGAATTGGATGCAGAATCAGTATTCACATTCAACGG
TTTGGTGATGTTGACTGGTCGAACTTTATTCACCAGAGCTGTTGTTGATG
GTTTGACTTTAGATTGCATCAATGGTGAACATTGAACTGGTTTGATTTCA
GCTTCGGTGATTGGAAGATTTATGGTTTTTCGTAATTTTGTTGATGATGT
TAATATAGTGTTANTTGCATCAATGGTGAACATTGAACTGGTTTGATTTC
AGCTTCGGTGATTGGAAGATTTATGGTTTTTCGTAATTTTGTTGATGATA
TTAATATAGTGTTATTGTTTGTCGTTTTGCTTTCGAAGGTCTTGGAAAGC
ATTTGAACTTTCCCTTTGGTAATGACTTCTTCCTCTTGGCAACGGTTTGA
GAATCTCTGTTTCTCCTCTTTTTGTTGTTCAACAAACAACATTGCATATG
CTGTAACATATAACAATAAAGGTAGCAAAATTGTCCAGTTATAAGAGAAC
GTATACAAGTCTTGGAGTTGATGAAGTGATTCTGCTTTTATGGTGACTCG
TCCTTCAGTTACCCTGGTGAGATGATCATGGATATCTTTAACGTTCAATC
CAGATGATTCAAATGGTGATTTTGCAACGATTGAGAATGGCAAACTCAAC
AATGTAACTATAACCAAACCAATAGAGTTTATAGGATGGTTGATCAAAGT
TGCCAATCCGTGAAAATCTGAAACAAGTGATTCTCTTAATGGAAgaaaca
gattgaaactaaacaACATCCAAACGAAAGCCATTGAAGTGATCATAGCC
GCGGTTTTATTTGTCATCGTACTGGATGATTTCTTActgtttaaaaatga
aaataaagtcaACGCGAATCCAAGAAGAATCACGACATTGCGAAATTCAA
TCACAGGAGATGAATGGTTCGCTTTCTCTTCCAAAAGATTTGTtaccaaa
ataaaatcattgGCCGATATTTGactattttgtaaacattctttgATTCT
CTGTAGATTGAGTTGGATGTTATGTACAGGTGTAGTGACAACTAGAATAA
GATTGCATATCAATTGTTGTATAATGAGTAACTGGAATGATGTGATCCCT
CTTTCGAAGATCTTCTTTTGAATATCATCTTTGAATTTTCCCAATTTGAG
TTGTACttctttcaaattcattttaacgatactctttttattttcattac
tgtCTTGTGTTCTTTTTAAGcactaaaaaaacaaataagGAATAATTTAT
GATTATGGACAATCGAATATATGTGCTTTTTGTATCAATTGTGCAAGGAA
GAGTGTAATAGCGAGTTAATGTATTTGTATCTCTGAGGACGGCTGAGTGA
ATTGGAAGTGATTTGG Coding sequence (CDS) from alignment at scaffold_503:128312..131977 >TCONS_00069654 ID=TCONS_00069654|Name=TCONS_00069654|organism=Clytia hemisphaerica|type=CDS|length=1332bp|location=Sequence derived from alignment at scaffold_503:128312..131977 (Clytia hemisphaerica)
ttacaatcGAAAGCCATTAATGAATGACTCATCATCACTTTCTACGTCAT
CTTCAAAACAATCAGAAAGTTTATTATAATTATCAATGAATGTTTTCATG
GCACGTAAAATGTCCGATGATATTTCAGTCTCAATTTTCAGCTCTTGATT
CAGTTTAAtgttctttaaaatgttttgagCAACGGTTAGAAAAACGTCGC
CTCTTAAGGAGACGTACCAAACACCGTGTTGTGATTTCATAGCTTTAAAA
CGAATCGATTCTGTGTGTTGTTTAACATTTTCGGGCATGGAAATTGTGGA
ATGAACTGTTTTCTCTAAATCAAGTTTACTGTAAACATTGCCTGCTTCAC
GTTCCTGGATAATCTTATCCAAGACATATCCGAACAGATCTGTCTGTGTC
TCGATCGTCGTCCCCGATTCTAAATCCGTATCCGTAACGATAGCCGGGAT
CGGAGCTTTCTTAGGACTCTGAAGATGTCCGTTAACAATGATATCCTCCT
CGCTTAACTTCAAATCGACTTGAATTGATTTATTATACTTGGTGATTTTG
CTCTCAACGTTAATTTTTCGTGGCAACGTAGAATAAACATATTCTTGTTT
TTCGATTGATTTCTTGTAAAGAGATAAAgcacttttttgtaatttagcAT
ACCTTTCTTGTGATAGTAGCTCACATTGTGTACCCAGATTGGTAGTCGGG
ATGCTGGTCTGTTGGAATTGGTCATTGGTGGGGATTGGGTCGTATTGTTG
ACTCGATTCTGTTGTCAAAATTATCTTTGTCTGTGAGGAGTTTTCAGTAA
TATCGACTGAAGTTTGCTGAGTGAAGCTCTCTGAAGAAGGCTTGACGTGA
ACTCCAATATCTGATTTCGTTATTGCCTTTACGGTATTTGCTGTGTCTAA
TGTCTGTAAGGTCTCATCATCAGATTGTGGTTTTGAACCGTTGGTCAAGG
AGTTCTTCATTTCAGAGATCCTTAATTTGTTTTGTCGGTTCTctatttca
tcattagtttgtGTGGATTTCTCGATTTTGACGACAAATGGTTTCACCAG
AGATTGCGGATAACTATTTGGAGAATCTTGGTTTACTGGGAACGGTTTGA
TGACAGATCCAGGTGAATTGGATGCAGAATCAGTATTCACATTCAACGGT
TTGGTGATGTTGACTGGTCGAACTTTATTCACCAGAGCTGTTGTTGATGG
TTTGACTTTAGATTGCATCAATGGTGAACATTGAACTGGTTTGATTTCAG
CTTCGGTGATTGGAAGATTTATGGTTTTTCGTAATTTTGTTGATGATGTT
AATATAGTGTTANTTGCATCAATGGTGAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069654-exon-scaffold_503-1491911889:128312..131977 | TCONS_00069654-exon-scaffold_503-1491911889:128312..131977 | Clytia hemisphaerica | exon |
| TCONS_00069654-exon-scaffold_503-1510915933:128312..131977 | TCONS_00069654-exon-scaffold_503-1510915933:128312..131977 | Clytia hemisphaerica | exon |
| TCONS_00069654-exon-scaffold_503-1575043694:128312..131977 | TCONS_00069654-exon-scaffold_503-1575043694:128312..131977 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_503 | supercontig | scaffold_503:128312..131977 . |
Blast
The following BLAST results are available for this feature:
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