TCONS_00069620 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069620
Unique NameTCONS_00069620
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1098

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069620 ID=TCONS_00069620|Name=TCONS_00069620|organism=Clytia hemisphaerica|type=transcript|length=1098bp
ggCCACATTTCCAAGAAGGATTTAAAGCACCCATGAAAAAGGTTGACAAT
GTGCTGAGAGATTATTGTGATGGAAAGGTCTATCAAGACCTACTGGAATC
AGGAATCATTGGAAGTAATACCATCACATTGCAGATGAATTCAGATGGAG
TGAAGATGTTCAGTTCATGTAATTACTCAGTATGGCCCATCTATCTAAGA
ATCAATGAACTTCCTCCTGCATTAAGGAAATTGAAAAAGTTCCGTGTTTT
GGTTGGGATCTGGTTTGGAGAGGAAAAACCTTACATGAGGAGTTTCTTGC
GTCCTTTAGTTGAAATGTTAAAGCAATGGTACTTTCAAGGTATCCAATTA
ACTTACAATGGAGAACAAAAATGTTACAAAGTTCTGTTGCTTAGCTCATT
GTTTGATCTCCccgCAAAATGTCTAGTCCAAGAAACCGTTCAGTTTAATG
GATACTATGGGTGCAGTTACTGTGAAATCGAGGGAGAACCCATAATGAAA
TTAAAAGGGACTAAATATGTCAAAACCTCGACAATTGTTTTTCCTATGAA
AACAATGGAAttacCATCAAAGcggacaaaagaaaaaacaattgcACAAG
CAATGGTATCATTGGAAAACAATTTAGTGGTAAACGGTATTCGAGGCTTG
TCTGTATTGGGTAAACTTACATATTATGATATTATCTGGGGAGTACCTTT
TGATACCATGCATGGAGCTTTTCTGGGTGTAACAAAaagACTTCTAGGCT
TGTGGTTTGACACTGAAAACCATAAAAATGCATGGTACCTTGGAAAGGTT
TTGAAAACACTCGATTCTGTTTATCTCGCAATGACACCACCAGATGAAGT
ATCTAGGCAGCCAAGAAGCATTGTAAAACATCGAAATTACTTTAAAGcaa
aCGAATTTCGTAATTGGCTATATTATTATGGACCAGTTATTATGCTTGGT
TTTCTGCCTGAACCATTTTACAGtcattttctattCCTTGTCAAAGGGAT
ATATACTTTACAAAAGCTATCAATAacacaaaatgaaattgaatctGCTG
AGGAAGATTTAAAAGTATTCGTATTTCAAACAGATAAACTTTATGGTA
Run BLAST on NCBI

protein sequence of TCONS_00069620-protein

>TCONS_00069620-protein ID=TCONS_00069620-protein|Name=TCONS_00069620-protein|organism=Clytia hemisphaerica|type=polypeptide|length=365bp
PHFQEGFKAPMKKVDNVLRDYCDGKVYQDLLESGIIGSNTITLQMNSDGV
KMFSSCNYSVWPIYLRINELPPALRKLKKFRVLVGIWFGEEKPYMRSFLR
PLVEMLKQWYFQGIQLTYNGEQKCYKVLLLSSLFDLPAKCLVQETVQFNG
YYGCSYCEIEGEPIMKLKGTKYVKTSTIVFPMKTMELPSKRTKEKTIAQA
MVSLENNLVVNGIRGLSVLGKLTYYDIIWGVPFDTMHGAFLGVTKRLLGL
WFDTENHKNAWYLGKVLKTLDSVYLAMTPPDEVSRQPRSIVKHRNYFKAN
EFRNWLYYYGPVIMLGFLPEPFYSHFLFLVKGIYTLQKLSITQNEIESAE
EDLKVFVFQTDKLYG
Run BLAST on NCBI

transcript from alignment at scaffold_503:68749..73192+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069620 ID=TCONS_00069620|Name=TCONS_00069620|organism=Clytia hemisphaerica|type=transcript|length=4444bp|location=Sequence derived from alignment at scaffold_503:68749..73192+ (Clytia hemisphaerica)
ggCCACATTTCCAAGAAGGATTTAAAGCACCCATGAAAAAGGTTGACAAT
GTGCTGAGAGATTATTGTGATGGAAAGGTCTATCAAGACCTACTGGAATC
AGGAATCATTGGAAGTAATACCATCACATTGCAGATGAATTCAGATGGAG
TGAAGATGTTCAGTTCATGTAATTACTCAGTATGGCCCATCTATCTAAGA
ATCAATGAACTTCCTCCTGCATTAAGGTAAATACTCTGATTTTCAacaaa
tacattttaaaacacTTCTTCAGGAACTGTCAGGAAATATGAATAGGAAG
AAAATTGGCTGAGTCGATTAGGTTAAACATTAATTAAAGACAAACTCAAC
ACCGTAAACCTTCTCTCTTGTTTGGAATGAAATAATCTCATGCTTGTTTT
GTCTTGATCACTATATTTAAATAAAGGAAAATCGAGATTATGAAAAGGTC
TCCAATTTTTAAGGtagtaatatttgagaaaaaaggaaattcccaCCAAA
GTTCAAAAGgaaaggtagagttttaacaaaaatagcctggaagtctataa
accccacccaaattgaaatatttgattacATTTAACAGATAGCCCAAAAC
CAACTTTCTCTCCCaaacttcaaatttcaaaaaacaaggaaataaccaaa
attcccaTATATTTGGACCATGATTGTAGGACCATAGCAAATTTTAGTTA
ATTATTTGTTGCTATATTTTGTAGAAAATATAGCTTCATCAAATTTGTCA
AAcaatattttggaatatttcacATTGTTGAATTTCGATTCTGATCATTC
AGGAAATTGAAAAAGTTCCGTGTTTTGGTTGGGATCTGGTTTGGAGAGGA
AAAACCTTACATGAGGAGTTTCTTGCGTCCTTTAGTTGAAATGTTAAAGC
AATGGTACTTTCAAGGTAATGACAATGTTTGACCTGCCATAAATCTCCGG
GGGGTACTTAAGCGAATGGAGGGTACGGCATGTCCCGCACTTAAGGAtac
cttttttttatttccatttccaaagtcccactaGGAGTTGGAAAAAATCA
CCCTTGTATTGTAAGGCGCACGCCTAACCAACTGAGCTAACCATGCATTC
TTGTTTCTGGGATTCTTTTGAAAGCTTTTCctcgaaaataaaaatttaga
ttttgtgACATAACTTTTTCATAAGCTTCAATAAGCAAAACCTGCCAGAA
AAACTTTTCACACTATTTTTATGCATATGCATACCTAAGGTATCCAATTA
ACTTACAATGGAGAACAAAAATGTTACAAAGTTCTGTTGCTTAGCTCATT
GTTTGATCTCCccggtatgtttttttttcaattgaaataaataaattgat
aAGGTACTCTTGTAACCAAAGCATAGTGATTTGCCCTGATAGGAGCTCAA
TGTACCCAGACTTATTTATTACACTAATACTCAAGTATTTAACGTgcaca
aaaaagacaaaaggaagaaaattaaaaaagaaaattaaaactagCAAGGG
GTGATTTgtatttgtatttatctttaaTCAAAGTTCATTTAAATAATATT
AATCCAATCTCTTCTTATATTAAAGCAAAATGTCTAGTCCAAGAAACCGT
TCAGTTTAATGGATACTATGGGTGCAGTTACTGTGAAATCGAGGGAGAAC
CCATAATGAAATTAAAAGGGACTAAATATGTCAAAACCTCGACAATTGTT
TTTCCTATGAAAACAATGGAAttacCATCAAAGcggacaaaagaaaaaac
aattgcACAAGCAATGGTATCATTGGAAAACAATTTAGTGGTAATCATGT
TTATCAAAACGTAATTTTATGAATAATCACATCAGAACGATATAGGTTAT
AGATAtttctaaaaattgttataaagcAAGATTTAAGATTTCATGTAGTA
TGAAAATCTACTtgtttgtgaaaatttaatggtttaCACTTTTaatgaaa
gcttttttccttttcaGGTAAACGGTATTCGAGGCTTGTCTGTATTGGGT
AAACTTACATATTATGATATTATCTGGGGAGTACCTTTTGATACCATGCA
TGGAGCTTTTCTGGGTGTAACAAAGTATAGTAGTTCTTTCACTCCTTTAA
TACAGGATGTATGTAATGTATTGTAATTtgatgtttatttttattttggt
tatttgaactgagtaatatcaagttaaaCATTTCAGATCTTAAAATATAT
GCAACCTAACAATTTGGCTAAAATAGATGGGAGAGTTTGCTTTGAAGCAT
AGGTATAAAGATGACTTTATCTTTGAAAACGTAGTTTACCTTTGAAATAA
gggaatttttaaaattcaagtTAGGATGGCCNAACCTAACAATTTGGCTA
AAATAGATGGGAGAGTTTGCTTTGAAGCATATGTATAAAGatgactttat
ttttgaaaacgtaGTTTACCTTTGAAATAAggcaatttttaaaattcagg
tTGGGATGGCATAAGGGGTTGGAGGGGTCTTTCCCATAATGAAGCTTAAA
TTctcttgttttattatttttagaagACTTCTAGGCTTGTGGTTTGACAC
TGAAAACCATAAAAATGCATGGTACCTTGGAAAGGTTTTGAAAACACTCG
ATTCTGTTTATCTCGCAATGACACCACCAGATGAAGTATCTAGGCAGCCA
AGAAGCATTGTAAAACATCGAAATTACTTTAAAGGTTATCAATTTAATAC
CAGATAATTATTTTCTTTGGGGTTTAGGGGTTTTGTCGAATATTAATTCT
TACATGTCAATTTCACCTCATTTCAACACTGAAAGGACACTTTAACGAGA
ATCCTTTTTATGTTTAATAAATTTTTATGTTTATCCTTTATTCAATTATA
CAATAAGATTATTTATAATTTGAGCTCCTCTTTGATGATTGTACTACCCT
ATAACATGTGATATTTTGAAAGGTTCaaatgttgtttattttttatttat
aaaatattaataataactagccggtacccggcgtcgcacgccggtttaac
tgtttgctgaacgcatttaaagtcctttggatgttgggaaggtggcataa
acacgatgaaatcaaaattaaagagaagaattctcttcaaagtttgactc
tatccctcctgggtgacgtatcttttaaccatattttgaaaaagattttt
gtggcaaaaatgatcagaaaacagaaaaagggcgccattcccaaattaca
ccataccggcgaccagcgacgtccgagacggctttgaaattagatttttt
tgNagtttttaccgccttttgaatttatttttaatgttgctgttgttcta
acaaacttgtcttgtgattattatgttttattttatatttgttcttttct
ttaacagattctgtttaaaagattttcttttgttttgaaaagaattcgaa
tgtctcaaatcaaataaggtcgttaattacattcgaaaacataaaacaaa
aaaaaagaaagaaaaaaaaagacaaagtcacatctatcaatcaaaacaaa
gtctttataaaacggcgcgaatctgatttaacacatttgtggagcaagaa
acaaaagtcatcttttaaaagaacaaaacattgcttgcgaaaacgaaagt
gacacacaaacaaaatgacatacagactacggctattaatatatagatta
ttaTAATATTAATAATAGATTTCCTTGAGCCTTACTCTTgtgtacctaat
agccggggtttggaaaaaaatctgaaaacttaATAAGTAGGAGGTTGGAA
tcaaaatgtcctgggtggagaatttttaaaaaggagactaatacagcaga
attaccttaaagaaattcaataatttaatttttgttattttttcaaattc
agcaaaCGAATTTCGTAATTGGCTATATTATTATGGACCAGTTATTATGC
TTGGTTTTCTGCCTGAACCATTTTACAGGTATACAGTCTATTCAAAAGAC
TATGGATTTTTAAATTGACTCCTCTTCAAAACTATAATAGTGATGTCACT
ATGGTTAGAAGGTTGAGGAACTTTCAAAGGTTTCTTTGTCTTCTAAAACT
TGTCTTTTGATTTAGATTTTGTGCAGCGTTCCCAAAAATAAGCAATTTTG
AACCCTTTCTTTGCGAAAAGGGGTGTAAAAATTAATGGTAAAGGATTTAA
TTACAGTGACTCAAATCCAGGGGGCAGACATTCTATATGAAAGCTAAAAA
GGCCTTTGAATTGTTTGATATCCAATTACATTTTATCGGTACTaaataat
taaattaatttACTTCATGAGAAGTTCAAGAATGGTATTTATTGATAATG
CGTGTCTCTTCtattttagtcattttctattCCTTGTCAAAGGGATATAT
ACTTTACAAAAGCTATCAATAacacaaaatgaaattgaatctGCTGAGGA
AGATTTAAAAGTATTCGTATTTCAAACAGATAAACTTTATGGTA

Coding sequence (CDS) from alignment at scaffold_503:68749..73192+

>TCONS_00069620 ID=TCONS_00069620|Name=TCONS_00069620|organism=Clytia hemisphaerica|type=CDS|length=8760bp|location=Sequence derived from alignment at scaffold_503:68749..73192+ (Clytia hemisphaerica)
CCACATTTCCAAGAAGGATTTAAAGCACCCATGAAAAAGGTTGACAATGT
GCTGAGAGATTATTGTGATGGAAAGGTCTATCAAGACCTACTGGAATCAG
GAATCATTGGAAGTAATACCATCACATTGCAGATGAATTCAGATGGAGTG
AAGATGTTCAGTTCATGTAATTACTCAGTATGGCCCATCTATCTAAGAAT
CAATGAACTTCCTCCTGCATTAAGGAAATTGAAAAAGTTCCGTGTTTTGG
TTGGGATCTGGTTTGGAGAGGAAAAACCTTACATGAGGAGTTTCTTGCGT
CCTTTAGTTGAAATGTTAAAGCAATGGTACTTTCAAGGTATCCAATTAAC
TTACAATGGAGAACAAAAATGTTACAAAGTTCTGTTGCTTAGCTCATTGT
TTGATCTCCccgCAAAATGTCTAGTCCAAGAAACCGTTCAGTTTAATGGA
TACTATGGGTGCAGTTACTGTGAAATCGAGGGAGAACCCATAATGAAATT
AAAAGGGACTAAATATGTCAAAACCTCGACAATTGTTTTTCCTATGAAAA
CAATGGAAttacCATCAAAGcggacaaaagaaaaaacaattgcACAAGCA
ATGGTATCATTGGAAAACAATTTAGTGGTAAACGGTATTCGAGGCTTGTC
TGTATTGGGTAAACTTACATATTATGATATTATCTGGGGAGTACCTTTTG
ATACCATGCATGGAGCTTTTCTGGGTGTAACAAAaagACTTCTAGGCTTG
TGGTTTGACACTGAAAACCATAAAAATGCATGGTACCTTGGAAAGGTTTT
GAAAACACTCGATTCTGTTTATCTCGCAATGACACCACCAGATGAAGTAT
CTAGGCAGCCAAGAAGCATTGTAAAACATCGAAATTACTTTAAAGcaaaC
GAATTTCGTAATTGGCTATATTATTATGGACCAGTTATTATGCTTGGTTT
TCTGCCTGAACCATTTTACAGtcattttctattCCTTGTCAAAGGGATAT
ATACTTTACAAAAGCTATCAATAacacaaaatgaaattgaatctGCTGAG
GAAGATTTAAAAGTATTCGTATTTCAAACAGATAAACTTTATGGTCCACA
TTTCCAAGAAGGATTTAAAGCACCCATGAAAAAGGTTGACAATGTGCTGA
GAGATTATTGTGATGGAAAGGTCTATCAAGACCTACTGGAATCAGGAATC
ATTGGAAGTAATACCATCACATTGCAGATGAATTCAGATGGAGTGAAGAT
GTTCAGTTCATGTAATTACTCAGTATGGCCCATCTATCTAAGAATCAATG
AACTTCCTCCTGCATTAAGGAAATTGAAAAAGTTCCGTGTTTTGGTTGGG
ATCTGGTTTGGAGAGGAAAAACCTTACATGAGGAGTTTCTTGCGTCCTTT
AGTTGAAATGTTAAAGCAATGGTACTTTCAAGGTATCCAATTAACTTACA
ATGGAGAACAAAAATGTTACAAAGTTCTGTTGCTTAGCTCATTGTTTGAT
CTCCccgCAAAATGTCTAGTCCAAGAAACCGTTCAGTTTAATGGATACTA
TGGGTGCAGTTACTGTGAAATCGAGGGAGAACCCATAATGAAATTAAAAG
GGACTAAATATGTCAAAACCTCGACAATTGTTTTTCCTATGAAAACAATG
GAAttacCATCAAAGcggacaaaagaaaaaacaattgcACAAGCAATGGT
ATCATTGGAAAACAATTTAGTGGTAAACGGTATTCGAGGCTTGTCTGTAT
TGGGTAAACTTACATATTATGATATTATCTGGGGAGTACCTTTTGATACC
ATGCATGGAGCTTTTCTGGGTGTAACAAAaagACTTCTAGGCTTGTGGTT
TGACACTGAAAACCATAAAAATGCATGGTACCTTGGAAAGGTTTTGAAAA
CACTCGATTCTGTTTATCTCGCAATGACACCACCAGATGAAGTATCTAGG
CAGCCAAGAAGCATTGTAAAACATCGAAATTACTTTAAAGcaaaCGAATT
TCGTAATTGGCTATATTATTATGGACCAGTTATTATGCTTGGTTTTCTGC
CTGAACCATTTTACAGtcattttctattCCTTGTCAAAGGGATATATACT
TTACAAAAGCTATCAATAacacaaaatgaaattgaatctGCTGAGGAAGA
TTTAAAAGTATTCGTATTTCAAACAGATAAACTTTATGGTCCACATTTCC
AAGAAGGATTTAAAGCACCCATGAAAAAGGTTGACAATGTGCTGAGAGAT
TATTGTGATGGAAAGGTCTATCAAGACCTACTGGAATCAGGAATCATTGG
AAGTAATACCATCACATTGCAGATGAATTCAGATGGAGTGAAGATGTTCA
GTTCATGTAATTACTCAGTATGGCCCATCTATCTAAGAATCAATGAACTT
CCTCCTGCATTAAGGAAATTGAAAAAGTTCCGTGTTTTGGTTGGGATCTG
GTTTGGAGAGGAAAAACCTTACATGAGGAGTTTCTTGCGTCCTTTAGTTG
AAATGTTAAAGCAATGGTACTTTCAAGGTATCCAATTAACTTACAATGGA
GAACAAAAATGTTACAAAGTTCTGTTGCTTAGCTCATTGTTTGATCTCCc
cgCAAAATGTCTAGTCCAAGAAACCGTTCAGTTTAATGGATACTATGGGT
GCAGTTACTGTGAAATCGAGGGAGAACCCATAATGAAATTAAAAGGGACT
AAATATGTCAAAACCTCGACAATTGTTTTTCCTATGAAAACAATGGAAtt
acCATCAAAGcggacaaaagaaaaaacaattgcACAAGCAATGGTATCAT
TGGAAAACAATTTAGTGGTAAACGGTATTCGAGGCTTGTCTGTATTGGGT
AAACTTACATATTATGATATTATCTGGGGAGTACCTTTTGATACCATGCA
TGGAGCTTTTCTGGGTGTAACAAAaagACTTCTAGGCTTGTGGTTTGACA
CTGAAAACCATAAAAATGCATGGTACCTTGGAAAGGTTTTGAAAACACTC
GATTCTGTTTATCTCGCAATGACACCACCAGATGAAGTATCTAGGCAGCC
AAGAAGCATTGTAAAACATCGAAATTACTTTAAAGcaaaCGAATTTCGTA
ATTGGCTATATTATTATGGACCAGTTATTATGCTTGGTTTTCTGCCTGAA
CCATTTTACAGtcattttctattCCTTGTCAAAGGGATATATACTTTACA
AAAGCTATCAATAacacaaaatgaaattgaatctGCTGAGGAAGATTTAA
AAGTATTCGTATTTCAAACAGATAAACTTTATGGTCCACATTTCCAAGAA
GGATTTAAAGCACCCATGAAAAAGGTTGACAATGTGCTGAGAGATTATTG
TGATGGAAAGGTCTATCAAGACCTACTGGAATCAGGAATCATTGGAAGTA
ATACCATCACATTGCAGATGAATTCAGATGGAGTGAAGATGTTCAGTTCA
TGTAATTACTCAGTATGGCCCATCTATCTAAGAATCAATGAACTTCCTCC
TGCATTAAGGAAATTGAAAAAGTTCCGTGTTTTGGTTGGGATCTGGTTTG
GAGAGGAAAAACCTTACATGAGGAGTTTCTTGCGTCCTTTAGTTGAAATG
TTAAAGCAATGGTACTTTCAAGGTATCCAATTAACTTACAATGGAGAACA
AAAATGTTACAAAGTTCTGTTGCTTAGCTCATTGTTTGATCTCCccgCAA
AATGTCTAGTCCAAGAAACCGTTCAGTTTAATGGATACTATGGGTGCAGT
TACTGTGAAATCGAGGGAGAACCCATAATGAAATTAAAAGGGACTAAATA
TGTCAAAACCTCGACAATTGTTTTTCCTATGAAAACAATGGAAttacCAT
CAAAGcggacaaaagaaaaaacaattgcACAAGCAATGGTATCATTGGAA
AACAATTTAGTGGTAAACGGTATTCGAGGCTTGTCTGTATTGGGTAAACT
TACATATTATGATATTATCTGGGGAGTACCTTTTGATACCATGCATGGAG
CTTTTCTGGGTGTAACAAAaagACTTCTAGGCTTGTGGTTTGACACTGAA
AACCATAAAAATGCATGGTACCTTGGAAAGGTTTTGAAAACACTCGATTC
TGTTTATCTCGCAATGACACCACCAGATGAAGTATCTAGGCAGCCAAGAA
GCATTGTAAAACATCGAAATTACTTTAAAGcaaaCGAATTTCGTAATTGG
CTATATTATTATGGACCAGTTATTATGCTTGGTTTTCTGCCTGAACCATT
TTACAGtcattttctattCCTTGTCAAAGGGATATATACTTTACAAAAGC
TATCAATAacacaaaatgaaattgaatctGCTGAGGAAGATTTAAAAGTA
TTCGTATTTCAAACAGATAAACTTTATGGTCCACATTTCCAAGAAGGATT
TAAAGCACCCATGAAAAAGGTTGACAATGTGCTGAGAGATTATTGTGATG
GAAAGGTCTATCAAGACCTACTGGAATCAGGAATCATTGGAAGTAATACC
ATCACATTGCAGATGAATTCAGATGGAGTGAAGATGTTCAGTTCATGTAA
TTACTCAGTATGGCCCATCTATCTAAGAATCAATGAACTTCCTCCTGCAT
TAAGGAAATTGAAAAAGTTCCGTGTTTTGGTTGGGATCTGGTTTGGAGAG
GAAAAACCTTACATGAGGAGTTTCTTGCGTCCTTTAGTTGAAATGTTAAA
GCAATGGTACTTTCAAGGTATCCAATTAACTTACAATGGAGAACAAAAAT
GTTACAAAGTTCTGTTGCTTAGCTCATTGTTTGATCTCCccgCAAAATGT
CTAGTCCAAGAAACCGTTCAGTTTAATGGATACTATGGGTGCAGTTACTG
TGAAATCGAGGGAGAACCCATAATGAAATTAAAAGGGACTAAATATGTCA
AAACCTCGACAATTGTTTTTCCTATGAAAACAATGGAAttacCATCAAAG
cggacaaaagaaaaaacaattgcACAAGCAATGGTATCATTGGAAAACAA
TTTAGTGGTAAACGGTATTCGAGGCTTGTCTGTATTGGGTAAACTTACAT
ATTATGATATTATCTGGGGAGTACCTTTTGATACCATGCATGGAGCTTTT
CTGGGTGTAACAAAaagACTTCTAGGCTTGTGGTTTGACACTGAAAACCA
TAAAAATGCATGGTACCTTGGAAAGGTTTTGAAAACACTCGATTCTGTTT
ATCTCGCAATGACACCACCAGATGAAGTATCTAGGCAGCCAAGAAGCATT
GTAAAACATCGAAATTACTTTAAAGcaaaCGAATTTCGTAATTGGCTATA
TTATTATGGACCAGTTATTATGCTTGGTTTTCTGCCTGAACCATTTTACA
GtcattttctattCCTTGTCAAAGGGATATATACTTTACAAAAGCTATCA
ATAacacaaaatgaaattgaatctGCTGAGGAAGATTTAAAAGTATTCGT
ATTTCAAACAGATAAACTTTATGGTCCACATTTCCAAGAAGGATTTAAAG
CACCCATGAAAAAGGTTGACAATGTGCTGAGAGATTATTGTGATGGAAAG
GTCTATCAAGACCTACTGGAATCAGGAATCATTGGAAGTAATACCATCAC
ATTGCAGATGAATTCAGATGGAGTGAAGATGTTCAGTTCATGTAATTACT
CAGTATGGCCCATCTATCTAAGAATCAATGAACTTCCTCCTGCATTAAGG
AAATTGAAAAAGTTCCGTGTTTTGGTTGGGATCTGGTTTGGAGAGGAAAA
ACCTTACATGAGGAGTTTCTTGCGTCCTTTAGTTGAAATGTTAAAGCAAT
GGTACTTTCAAGGTATCCAATTAACTTACAATGGAGAACAAAAATGTTAC
AAAGTTCTGTTGCTTAGCTCATTGTTTGATCTCCccgCAAAATGTCTAGT
CCAAGAAACCGTTCAGTTTAATGGATACTATGGGTGCAGTTACTGTGAAA
TCGAGGGAGAACCCATAATGAAATTAAAAGGGACTAAATATGTCAAAACC
TCGACAATTGTTTTTCCTATGAAAACAATGGAAttacCATCAAAGcggac
aaaagaaaaaacaattgcACAAGCAATGGTATCATTGGAAAACAATTTAG
TGGTAAACGGTATTCGAGGCTTGTCTGTATTGGGTAAACTTACATATTAT
GATATTATCTGGGGAGTACCTTTTGATACCATGCATGGAGCTTTTCTGGG
TGTAACAAAaagACTTCTAGGCTTGTGGTTTGACACTGAAAACCATAAAA
ATGCATGGTACCTTGGAAAGGTTTTGAAAACACTCGATTCTGTTTATCTC
GCAATGACACCACCAGATGAAGTATCTAGGCAGCCAAGAAGCATTGTAAA
ACATCGAAATTACTTTAAAGcaaaCGAATTTCGTAATTGGCTATATTATT
ATGGACCAGTTATTATGCTTGGTTTTCTGCCTGAACCATTTTACAGtcat
tttctattCCTTGTCAAAGGGATATATACTTTACAAAAGCTATCAATAac
acaaaatgaaattgaatctGCTGAGGAAGATTTAAAAGTATTCGTATTTC
AAACAGATAAACTTTATGGTCCACATTTCCAAGAAGGATTTAAAGCACCC
ATGAAAAAGGTTGACAATGTGCTGAGAGATTATTGTGATGGAAAGGTCTA
TCAAGACCTACTGGAATCAGGAATCATTGGAAGTAATACCATCACATTGC
AGATGAATTCAGATGGAGTGAAGATGTTCAGTTCATGTAATTACTCAGTA
TGGCCCATCTATCTAAGAATCAATGAACTTCCTCCTGCATTAAGGAAATT
GAAAAAGTTCCGTGTTTTGGTTGGGATCTGGTTTGGAGAGGAAAAACCTT
ACATGAGGAGTTTCTTGCGTCCTTTAGTTGAAATGTTAAAGCAATGGTAC
TTTCAAGGTATCCAATTAACTTACAATGGAGAACAAAAATGTTACAAAGT
TCTGTTGCTTAGCTCATTGTTTGATCTCCccgCAAAATGTCTAGTCCAAG
AAACCGTTCAGTTTAATGGATACTATGGGTGCAGTTACTGTGAAATCGAG
GGAGAACCCATAATGAAATTAAAAGGGACTAAATATGTCAAAACCTCGAC
AATTGTTTTTCCTATGAAAACAATGGAAttacCATCAAAGcggacaaaag
aaaaaacaattgcACAAGCAATGGTATCATTGGAAAACAATTTAGTGGTA
AACGGTATTCGAGGCTTGTCTGTATTGGGTAAACTTACATATTATGATAT
TATCTGGGGAGTACCTTTTGATACCATGCATGGAGCTTTTCTGGGTGTAA
CAAAaagACTTCTAGGCTTGTGGTTTGACACTGAAAACCATAAAAATGCA
TGGTACCTTGGAAAGGTTTTGAAAACACTCGATTCTGTTTATCTCGCAAT
GACACCACCAGATGAAGTATCTAGGCAGCCAAGAAGCATTGTAAAACATC
GAAATTACTTTAAAGcaaaCGAATTTCGTAATTGGCTATATTATTATGGA
CCAGTTATTATGCTTGGTTTTCTGCCTGAACCATTTTACAGtcattttct
attCCTTGTCAAAGGGATATATACTTTACAAAAGCTATCAATAacacaaa
atgaaattgaatctGCTGAGGAAGATTTAAAAGTATTCGTATTTCAAACA
GATAAACTTTATGGTCCACATTTCCAAGAAGGATTTAAAGCACCCATGAA
AAAGGTTGACAATGTGCTGAGAGATTATTGTGATGGAAAGGTCTATCAAG
ACCTACTGGAATCAGGAATCATTGGAAGTAATACCATCACATTGCAGATG
AATTCAGATGGAGTGAAGATGTTCAGTTCATGTAATTACTCAGTATGGCC
CATCTATCTAAGAATCAATGAACTTCCTCCTGCATTAAGGAAATTGAAAA
AGTTCCGTGTTTTGGTTGGGATCTGGTTTGGAGAGGAAAAACCTTACATG
AGGAGTTTCTTGCGTCCTTTAGTTGAAATGTTAAAGCAATGGTACTTTCA
AGGTATCCAATTAACTTACAATGGAGAACAAAAATGTTACAAAGTTCTGT
TGCTTAGCTCATTGTTTGATCTCCccgCAAAATGTCTAGTCCAAGAAACC
GTTCAGTTTAATGGATACTATGGGTGCAGTTACTGTGAAATCGAGGGAGA
ACCCATAATGAAATTAAAAGGGACTAAATATGTCAAAACCTCGACAATTG
TTTTTCCTATGAAAACAATGGAAttacCATCAAAGcggacaaaagaaaaa
acaattgcACAAGCAATGGTATCATTGGAAAACAATTTAGTGGTAAACGG
TATTCGAGGCTTGTCTGTATTGGGTAAACTTACATATTATGATATTATCT
GGGGAGTACCTTTTGATACCATGCATGGAGCTTTTCTGGGTGTAACAAAa
agACTTCTAGGCTTGTGGTTTGACACTGAAAACCATAAAAATGCATGGTA
CCTTGGAAAGGTTTTGAAAACACTCGATTCTGTTTATCTCGCAATGACAC
CACCAGATGAAGTATCTAGGCAGCCAAGAAGCATTGTAAAACATCGAAAT
TACTTTAAAGcaaaCGAATTTCGTAATTGGCTATATTATTATGGACCAGT
TATTATGCTTGGTTTTCTGCCTGAACCATTTTACAGtcattttctattCC
TTGTCAAAGGGATATATACTTTACAAAAGCTATCAATAacacaaaatgaa
attgaatctGCTGAGGAAGATTTAAAAGTATTCGTATTTCAAACAGATAA
ACTTTATGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043356XLOC_043356Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069620-exon-scaffold_503-1491911889:68749..68974TCONS_00069620-exon-scaffold_503-1491911889:68749..68974Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1510915933:68749..68974TCONS_00069620-exon-scaffold_503-1510915933:68749..68974Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1575043694:68749..68974TCONS_00069620-exon-scaffold_503-1575043694:68749..68974Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1491911889:69551..69663TCONS_00069620-exon-scaffold_503-1491911889:69551..69663Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1510915933:69551..69663TCONS_00069620-exon-scaffold_503-1510915933:69551..69663Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1575043694:69551..69663TCONS_00069620-exon-scaffold_503-1575043694:69551..69663Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1491911889:69988..70062TCONS_00069620-exon-scaffold_503-1491911889:69988..70062Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1510915933:69988..70062TCONS_00069620-exon-scaffold_503-1510915933:69988..70062Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1575043694:69988..70062TCONS_00069620-exon-scaffold_503-1575043694:69988..70062Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1491911889:70324..70538TCONS_00069620-exon-scaffold_503-1491911889:70324..70538Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1510915933:70324..70538TCONS_00069620-exon-scaffold_503-1510915933:70324..70538Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1575043694:70324..70538TCONS_00069620-exon-scaffold_503-1575043694:70324..70538Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1491911889:70716..70822TCONS_00069620-exon-scaffold_503-1491911889:70716..70822Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1510915933:70716..70822TCONS_00069620-exon-scaffold_503-1510915933:70716..70822Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1575043694:70716..70822TCONS_00069620-exon-scaffold_503-1575043694:70716..70822Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1491911889:71272..71432TCONS_00069620-exon-scaffold_503-1491911889:71272..71432Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1510915933:71272..71432TCONS_00069620-exon-scaffold_503-1510915933:71272..71432Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1575043694:71272..71432TCONS_00069620-exon-scaffold_503-1575043694:71272..71432Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1491911889:72601..72676TCONS_00069620-exon-scaffold_503-1491911889:72601..72676Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1510915933:72601..72676TCONS_00069620-exon-scaffold_503-1510915933:72601..72676Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1575043694:72601..72676TCONS_00069620-exon-scaffold_503-1575043694:72601..72676Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1491911889:73068..73192TCONS_00069620-exon-scaffold_503-1491911889:73068..73192Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1510915933:73068..73192TCONS_00069620-exon-scaffold_503-1510915933:73068..73192Clytia hemisphaericaexon
TCONS_00069620-exon-scaffold_503-1575043694:73068..73192TCONS_00069620-exon-scaffold_503-1575043694:73068..73192Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069620-proteinTCONS_00069620-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_503supercontigscaffold_503:68749..73192 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	13.7857	5.17068	8.00663	8.93128	7.74109	6.9539	5.85369	9.08251	6.73672	10.6981	4.375	5.33106	4.75383	5.39877	2.49215	4.26295	5.15529	3.56453	1.10469	4.24273	11.5287	8.15361	2.96093	0.344685	2.85822	2.67236
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004242Transposase_21
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069620 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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