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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069611 ID=TCONS_00069611|Name=TCONS_00069611|organism=Clytia hemisphaerica|type=transcript|length=1443bp
GTGCAAAGACCATACTTCCTTCCATCACCGTCGCTGTGTTTGCCACTCCT
TGCCCAACAACATATCTTTGGTTACGGTTGTGCATTATATATCCATAgtg
ttttttctgttctttAACCATTGCGATCCCTCCGCAGTTGTTTGAAGGGC
AgttctataaaaaaacaaattggaTAATATTCTCatcatagaaaaaaagt
tcattaATTTCACACTTCATAAATATAAATAGGTACTAAGGTATTTTGCT
TTTACTGTCGGGCGTCTGCGTTGCCGCTGTCTGGAAATACTGGATTGACA
TCTCCAAGAAGGCTTTTGAACGTGTTCATGCTCTAATGCTAGCTTGCGTT
CCGTAGCCTGCTTGCCACGTTCGCGACCTTGTCTCGAGAACAACAAACGT
TGCTCTAACTGTTCCGTTCGAATTTCTTCATGCCGTGCGGAATTCTTTTT
AATGGCTTTTTCTTTCGGTTAGCCTCCATCGCGGCTTTACGGATGTTCAC
TTGTTCAGCTCGTCTTTTTGAATTCCGACTGAATGTGGGCCGTTCGTCTA
GCTGTCTTCGACGGTTCTCCTCGTGACGATTTGCATAGATTTAAGGTTCG
ATCGAAGGGGTGGGAGCTTTTTCTCATAACGGGAGAATCGGCACGGATGA
CGGACTTCCGGAAATAAAATATCATCCACGGCTTGTAATGGGGCTGTTTG
GCTGTGTGCGCCGCTCCACTGGTGAAAATTGGAACCTCCAATGATGTTGG
ACCTATCTTAATGAATGGCTTTAGGGTCGTTGACGATTGCTGGGTTGCGT
TGGGAGGTTGATGACTGGCCTGTCAcgcttttgactttttgacctTTTTG
ACAAGAGCCTAACTGATGCGTCACTTTCACACCTGGAATCTAAATATGAA
TTACTCGAGCATGAAGCATCGTTATCTTTGGAGTGTTGGCCAACGTCAAC
CTAAAAAGTGGAAGATTACTCGAAAAATATTAGAATTAAAAATGTATCTA
GGGTACTTATAATGGTTTGCAAAATTAACATTTGAGATTGATCATTTAAT
TTTCAGCATGGAATTTGGTAGCTTACTGTGGAACCGTTCAGTATGTTTGT
TTCAATGATTAATAAGCCTTCCAAGGTGTCAAATACAACTTCGTGGtctg
aaaaaaagataaataaaataaattcagattgaaattaattttgattcGAT
TTTGAGGAGTTCATTTTATACTGCTATTAGCTGTCTAGTTCCATGAACAC
AATCAATCCAAAAATACAGTTAAAGTCGTTAAAAGTAAACTATTAGATCG
TTCGATTCAGAAAAGAATGGAGTTGTGAATGCAATGGaatctccataatt
cgaacttgCTATGAAAGGGCATGTAAATCTGTTCGAGTTTCAGAGGCTGA
TTTATAAAAGTTTTAACTGAAGAAGATAGAAAACGTGTTCGAT Run BLAST on NCBI transcript from alignment at scaffold_502:65285..66727 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069611 ID=TCONS_00069611|Name=TCONS_00069611|organism=Clytia hemisphaerica|type=transcript|length=1443bp|location=Sequence derived from alignment at scaffold_502:65285..66727 (Clytia hemisphaerica)
ATCGAACACGTTTTCTATCTTCTTCAGTTAAAACTTTTATAAATCAGCCT
CTGAAACTCGAACAGATTTACATGCCCTTTCATAGcaagttcgaattatg
gagattCCATTGCATTCACAACTCCATTCTTTTCTGAATCGAACGATCTA
ATAGTTTACTTTTAACGACTTTAACTGTATTTTTGGATTGATTGTGTTCA
TGGAACTAGACAGCTAATAGCAGTATAAAATGAACTCCTCAAAATCgaat
caaaattaatttcaatctgaatttattttatttatctttttttcagaCCA
CGAAGTTGTATTTGACACCTTGGAAGGCTTATTAATCATTGAAACAAACA
TACTGAACGGTTCCACAGTAAGCTACCAAATTCCATGCTGAAAATTAAAT
GATCAATCTCAAATGTTAATTTTGCAAACCATTATAAGTACCCTAGATAC
ATTTTTAATTCTAATATTTTTCGAGTAATCTTCCACTTTTTAGGTTGACG
TTGGCCAACACTCCAAAGATAACGATGCTTCATGCTCGAGTAATTCATAT
TTAGATTCCAGGTGTGAAAGTGACGCATCAGTTAGGCTCTTGTCAAAAag
gtcaaaaagtcaaaagcgTGACAGGCCAGTCATCAACCTCCCAACGCAAC
CCAGCAATCGTCAACGACCCTAAAGCCATTCATTAAGATAGGTCCAACAT
CATTGGAGGTTCCAATTTTCACCAGTGGAGCGGCGCACACAGCCAAACAG
CCCCATTACAAGCCGTGGATGATATTTTATTTCCGGAAGTCCGTCATCCG
TGCCGATTCTCCCGTTATGAGAAAAAGCTCCCACCCCTTCGATCGAACCT
TAAATCTATGCAAATCGTCACGAGGAGAACCGTCGAAGACAGCTAGACGA
ACGGCCCACATTCAGTCGGAATTCAAAAAGACGAGCTGAACAAGTGAACA
TCCGTAAAGCCGCGATGGAGGCTAACCGAAAGAAAAAGCCATTAAAAAGA
ATTCCGCACGGCATGAAGAAATTCGAACGGAACAGTTAGAGCAACGTTTG
TTGTTCTCGAGACAAGGTCGCGAACGTGGCAAGCAGGCTACGGAACGCAA
GCTAGCATTAGAGCATGAACACGTTCAAAAGCCTTCTTGGAGATGTCAAT
CCAGTATTTCCAGACAGCGGCAACGCAGACGCCCGACAGTAAAAGCAAAA
TACCTTAGTACCTATTTATATTTATGAAGTGTGAAATtaatgaacttttt
ttctatgatGAGAATATTAtccaatttgtttttttatagaacTGCCCTTC
AAACAACTGCGGAGGGATCGCAATGGTTaaagaacagaaaaaacacTATG
GATATATAATGCACAACCGTAACCAAAGATATGTTGTTGGGCAAGGAGTG
GCAAACACAGCGACGGTGATGGAAGGAAGTATGGTCTTTGCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069611-exon-scaffold_502-1491911889:65285..66727 | TCONS_00069611-exon-scaffold_502-1491911889:65285..66727 | Clytia hemisphaerica | exon |
| TCONS_00069611-exon-scaffold_502-1510915933:65285..66727 | TCONS_00069611-exon-scaffold_502-1510915933:65285..66727 | Clytia hemisphaerica | exon |
| TCONS_00069611-exon-scaffold_502-1575043694:65285..66727 | TCONS_00069611-exon-scaffold_502-1575043694:65285..66727 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_502 | supercontig | scaffold_502:65285..66727 . |
Blast
The following BLAST results are available for this feature:
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