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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069448 ID=TCONS_00069448|Name=TCONS_00069448|organism=Clytia hemisphaerica|type=transcript|length=1423bp
GTAAAGTAGGAGATCTTCTGCTTGGCTCGAATCCGGAGGATGGAGGAAGG
TTAAAAGTCAAGCGAAAGATTAGTCACGTAGAATTAGGTTTTGACCGTGA
AAAAAGTGTGTAATTGAAGTTTGGTCCGAAGCGACCAATAATCCACCATA
TTTCCTTGTGACGTCATCCATCAATTTCTCAATAAAATCTATATTTTGTA
ACCGGTCTCAAAAGATAGGCCTTGAAACGTACCAACTGCCGTTTTCGGAC
AACGATCCACGTTTTTTATAAGAACAAACTATATAAGAACACAAGGCTTC
GATGGCCAAAATGTTAAGAACAAGTTAAGAACATTTTAAGGCTTTTGGAC
TCTAAAACACCCGATTTCTCAGGAAAACGAGTTAAATACTCACAAAATAG
TAAAAATAAGAAcatgttaagaacatttttaggcttaatctcaaaaagtt
aagaacatccgaagacctcaaaaaatttcgatgttattataaaaaacgaT
ATGGTTTATAGGATTTCGACAGCAAGATCACGAGATATTTGGGTTTAAAG
GTTTGTTGGATCAgctaaaatattgtaaaatgtgctgactcagcaaaaga
TATTGATGTTCCAAATTTGCACTAACAAAACGCAAACTCGTGTTCACTTA
GAATATTTTCCACCAAGCTAATGTTAATGTCACTCAAATTCCTATTCAGT
TAGTCACTTTTCTTAGGAGTTATTCAAACCTGTTCCAGCTGTGAttgctt
ttaacttttttattgcTTGTTAGCAGCTTGACTATTAGGCATTTTAGACC
ATTTTCAAGATCGTTTTAAGACCTCTTTTAAAATCTAGTGGTTAGAAGTT
GACTGGATGACTACGGTTTAAATTTAAGTAGCTactagtacagtggtaga
gttTCCCGGGAGGGGGGGTACTTaagcaaatggagggtacggtatgtgcc
gcccttaacggtaccttttttgaatttccaaagtcccgctaagggtcgga
aaaatcagaaaatcaaatttcagtcccactaagggtcggaaaaataagaa
aatttcaactttctacCCCCTGAAAGGTCGAAATtaggtcaaaattggtc
aaatttgtcccgctaagggtcgtaaaattcccaaaattttcctttgtttt
cttctttttagtcccggtaaaggtccaaagttcgaaagttggGCGCCCCC
CCCGTCAgttcgcaaccctagtacccccccctggGGTAGAGTTTGCAGCA
AGCTTAACTAAAACTCTCTTTTCTGTTTGAAGGTTTAGTCACGACAGTAT
TTTGTTTCGTTGTATTTCGTTGGTTGAATCCTCTGTAATTCCTTCTTGAA
GTTTGGTAATTATTATTCCGGATGTAAACAAATTGCTGCaaacattttca
attatttgaaaagatgatttatt Run BLAST on NCBI transcript from alignment at scaffold_5:223877..225299 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069448 ID=TCONS_00069448|Name=TCONS_00069448|organism=Clytia hemisphaerica|type=transcript|length=1423bp|location=Sequence derived from alignment at scaffold_5:223877..225299 (Clytia hemisphaerica)
aataaatcatcttttcaaataattgaaaatgtttGCAGCAATTTGTTTAC
ATCCGGAATAATAATTACCAAACTTCAAGAAGGAATTACAGAGGATTCAA
CCAACGAAATACAACGAAACAAAATACTGTCGTGACTAAACCTTCAAACA
GAAAAGAGAGTTTTAGTTAAGCTTGCTGCAAACTCTACCccagggggggg
tactagggttgcgaacTGACGGGGGGGGCGCccaactttcgaactttgga
cctttaccgggactaaaaagaagaaaacaaaggaaaattttgggaatttt
acgacccttagcgggacaaatttgaccaattttgacctaATTTCGACCTT
TCAGGGGgtagaaagttgaaattttcttatttttccgacccttagtggga
ctgaaatttgattttctgatttttccgacccttagcgggactttggaaat
tcaaaaaaggtaccgttaagggcggcacataccgtaccctccatttgctt
AAGTACCCCCCCTCCCGGGAaactctaccactgtactagtAGCTACTTAA
ATTTAAACCGTAGTCATCCAGTCAACTTCTAACCACTAGATTTTAAAAGA
GGTCTTAAAACGATCTTGAAAATGGTCTAAAATGCCTAATAGTCAAGCTG
CTAACAAgcaataaaaaagttaaaagcaaTCACAGCTGGAACAGGTTTGA
ATAACTCCTAAGAAAAGTGACTAACTGAATAGGAATTTGAGTGACATTAA
CATTAGCTTGGTGGAAAATATTCTAAGTGAACACGAGTTTGCGTTTTGTT
AGTGCAAATTTGGAACATCAATAtcttttgctgagtcagcacattttaca
atattttagcTGATCCAACAAACCTTTAAACCCAAATATCTCGTGATCTT
GCTGTCGAAATCCTATAAACCATAtcgttttttataataacatcgaaatt
ttttgaggtcttcggatgttcttaactttttgagattaagcctaaaaatg
ttcttaacatgTTCTTATTTTTACTATTTTGTGAGTATTTAACTCGTTTT
CCTGAGAAATCGGGTGTTTTAGAGTCCAAAAGCCTTAAAATGTTCTTAAC
TTGTTCTTAACATTTTGGCCATCGAAGCCTTGTGTTCTTATATAGTTTGT
TCTTATAAAAAACGTGGATCGTTGTCCGAAAACGGCAGTTGGTACGTTTC
AAGGCCTATCTTTTGAGACCGGTTACAAAATATAGATTTTATTGAGAAAT
TGATGGATGACGTCACAAGGAAATATGGTGGATTATTGGTCGCTTCGGAC
CAAACTTCAATTACACACTTTTTTCACGGTCAAAACCTAATTCTACGTGA
CTAATCTTTCGCTTGACTTTTAACCTTCCTCCATCCTCCGGATTCGAGCC
AAGCAGAAGATCTCCTACTTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069448-exon-scaffold_5-1491911889:223877..225299 | TCONS_00069448-exon-scaffold_5-1491911889:223877..225299 | Clytia hemisphaerica | exon |
| TCONS_00069448-exon-scaffold_5-1510915933:223877..225299 | TCONS_00069448-exon-scaffold_5-1510915933:223877..225299 | Clytia hemisphaerica | exon |
| TCONS_00069448-exon-scaffold_5-1575043694:223877..225299 | TCONS_00069448-exon-scaffold_5-1575043694:223877..225299 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:223877..225299 . |
Blast
The following BLAST results are available for this feature:
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