TCONS_00069380 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069380
Unique NameTCONS_00069380
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3809

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069380 ID=TCONS_00069380|Name=TCONS_00069380|organism=Clytia hemisphaerica|type=transcript|length=3809bp
tccgatgacgtcatcaatgttGCACTACGAAAATAACGTCATCAATTCGG
CATCATGGGAATATTTTTACGTTTGTGATTTCTTGCTTTCTTGGTTTTTA
TACGATCTACTAAATGCGATCTCCTGAAATTGCTATAAGGATCAAAAGCT
GGTTGTTCTTCTTTGAGTTTCTTTggctctcctccattggttgatttttt
gtCTGTAATACCCTCCGGTGGAGTGTTTCCTGCCTTTTCGTTTGTCACTG
ATTGGTCCTTTTGTCTTGCAGGAGCTCCATCATTGGTTAATTTCTTATCC
GTAGTGTTTCCTATCTTTGAAGACGTCACTGATTGGTCCTTTCCATTCAA
AAACACTCCTCCTTGGTTGGATTTCTGTTGTACATTTTCTAACTTTTGTT
TCATCTCTTGTAACATCTTGATTTGTTTTGCTAAAACGTCAGTTTtgaat
tttcccattttcttaGGTTCTGAATTACCTTCACTAGGTTGAGTAGCTTC
ACTTCCAGTGTGTTTTTGACTTACAGGCTGAACAGAATCGCCCTGAAGTC
CATTTGTATTCGATGCCTGGTTTTGTTGAGTTTGTCTTTCAACCATGGCT
TGTTCACTTTGTTCGTTTTGAAGTTTCATTTGAGCTAACTTGAAACGCTC
CTTTTCCCTATCCGCCTCTGTTATATGTTCGTCATGTACATCTTCTTTCT
TGGTCATCGAAATCTCTTTCAGGTGTGGCGTATCTTTCTCATTTTGTGTC
GTAACTTCATTTTTTGTTGCCGTAACCTTTTCATTTTGCGTCGTAACTTC
ATTATTCTTTGCCGTGATTTTCTCATTTTGTGTCATATCTTCATTATTCG
TTGCCGTAACCTTTTCATTTTGTGTCgcaatttcattattttttgccgTG
ATTTTTTCAACTTGTGTTGAAACTTCATTGTTCGCCGCCGTAACCTTTCC
ATCTTGTGTCGTAGTCTTTTTGTTCTCTGTCGTAACCTCATTGTTCTTTG
CTGCTTTGTCATTTCCTTGATGTTGCGAAGATTCGGTTGAGACTTTTTCA
TCTCGCTTGCTGCTTTCAGTAATCTTTGAAAGGTCTTCCATTTTTTGCGA
ACTTCCAAGATACTCGTTAATTCCTTTCGAAGCAATCTCTTTTTCCTTTG
CTTCgtcaattttcttcaatttcatcATCTCTCCTTCAACAACCTGCTCT
TGACTTGTGGTATCACCCAGCGCACGCGCATTAGCCTTTTCTTTCACTTT
GTCATTCATATATTGCAAACTCCCCGCAGTATAATTGGACAATGTTTTCA
ACATTTCTCCagttttatttcgatttttcatcGTTTGCAGCAGACTTTTG
TATGCCTTCAAAACCTTGTACGCTTTAAACAGTTGTTTAGCATTTTCTCT
ATTCTTCAGCGCTTTAGCTTGTAAGGCTTTAATATCCTTGATTTTCTGGA
CTGTCGTTTCTTCCTTGTTAGATACTGATTCAGTGACGTCATGTTTAGTC
TCTCCAGGTCGGTGGATATTTGTATCGTTTGATATTCCGGTCTGTGAATT
ATCGACAGCGTCTAAAGATTCTCTCAGTTCTTTAACCAtatgtttcaaac
tttcatttttcgTTTTATCCTCACGGAAAGTGATCAATGGAGCTTCTTTA
CCCATTATTGTAACAAAATGAtcatcttctttctttttctggTGGAAAGC
TTGTTGAAATccattctgattggtcaattcGGACCGGAAACCATTTTGAT
TGGCTAATTCTGATTGATTCATCTGCTGATTGGATAAAGTGTTTAATGTC
ATATTATTTTGATGGAGTAAAACAGCTTGGTTTTGAACAGACGTTTTATT
TGAAACTGAATTCTGATTCGATGATACTTTTTCTTCTAAAGGCTTTAATG
ACTCTTTGTTTTTCTCATTCGCCAAAGCTGCCATTGTAGTGTAAACATCA
TCAActgaattctgattggctgatcCAGAAATTCCTTTCATTTGATTGGC
TGATTTTTCAGACTcttgattttgattggttgaagaAGGACCGATATTTC
CACCCTGATTGAATGCTTCGGAACTTGCTTTCATTTCATTGGGTGCTTTA
CCAGATTCCTGTTGCTGAttggtttttgatggatttttacCATCATCTGA
TTGGCTGTTCTTCTGTTTTTCAGattcttttgttgattttgacTTCTGTT
TTTGGATTTCCACTTCGTAAGCCATGATCTGTTTATCATCAAGTGAGCTT
TTGGAATCTTTTGATGGTTTAGATGCTTCTTTTGTATCCTTAACTTCTTC
CTTTTTCtccttttccttttctttcaaagctttttcaaattctttttcca
tACTTGACAATGGTTTCTTCTGTTTGCCTTGTTCTGCAAGTTCAATTGTT
TCTTTATTATTATCTCCGTCATTCTTCACTTCCGATACCCTTTCATCGTT
GTTGTCATTATCCTTCTTATCTCCCTTATCCTTGTCTGCTGCTAACGTTA
TCTTTTCTTCAATTTccaattctttttctttcttcatttcCTTTGCATCA
ACAGCTTGGTCTTTATTTACGTCACTCCCTTTATCCTCTGTCTTTTTATC
TCCGTCATTTTTGTCTTCTGCTAACTTCTTATTGACCTCGGGTActtttt
ctttatctttcttcttcttttcatttccATCATTCTTGGAATCCATTACA
TTATCTCCACCATTTTCTTTATCCTCTGTCTTTTTATCTCCGTTATCCTT
TTCTTCTGCTAACTTCTTGTTGACCTCGGGTACTTTTTCTTCACCTTCCT
TTTTCTCTTTATGTCTATCATTTTTCGTCTTCATCATTTTATCTCCAACA
TCTTTCAGCACATCCAACTTCGATTCATCGCTCTCTTTTTTCTTATCTCC
TATCTTTTTGAGTATATCCTTGTTTATTTCGCTGGAGCCTTTCTTATCTT
CTTTGATATTCTCCTTGATTTTCGACCCAATTGATTTGTCATCATTCtcc
tcttcttcatttttatcaagCTTCTGCGCCATCTTTTGCTCGTCAAGTTT
GTCTGCCTCTTCAAGGAGTCTTGATTGCGGGATACCCATTCCTCCCATAG
ACATGTTGTCATGGTAACTCTGATCCACCACCGATTCATTGCTCTTCGTA
TTTTGCACTTTGGAATCCTCAAGCTGGCTCATCTTTGCTTCTTCTGTTTC
ACTTACATTTTGTTCTTGTTcttcattttgtattttttcttctttctctt
ctcCATCGTTACCATCGACAGGTTTTGAATCATCAGCTGATTTTTCTTTG
GAAGCTGTCATCGATTGTGTTGATGTGCTATTCTTTCGATTTTCATTCTC
ATCATCTGTGTTCTTCATCTCAGATACATCTTCTGATTGGTCcaatttct
tttcttcattCGATTTTTCCGCTTGATCTTCATGTTGTTGTCTAGAAGCT
TCGGTTTTGTTTTCTTCCTGACCattcttttcttccttttttccgtTCTC
TAATTCTTCATCAATTTCCTTCCGTAGCTCCTTCTCCTCCTTCTTTTTTG
GATTATCTTTCTGCGCATGCGTACCAACCTCTTCTTTCCGTAGCTTTTCC
tctttctgtttgtttttttcgttCTTCGATAATTTTTCCTCCGGTCGTAG
TCCCTCATCTATtagcattttttcttcttcgctcGCATTTTTCATCTCTT
CCTCTTCTTCTTCCTTCGTCTTCTTTTCGTCGCTTTGTAATTTCTCTACT
TTCACATTCTCTTTATcgttattcttttcttttttttcctctttcttcaT
CTTCTCCTC
Run BLAST on NCBI

protein sequence of TCONS_00069380-protein

>TCONS_00069380-protein ID=TCONS_00069380-protein|Name=TCONS_00069380-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1255bp
EEKMKKEEKKEKNNDKENVKVEKLQSDEKKTKEEEEEEMKNASEEEKMLI
DEGLRPEEKLSKNEKNKQKEEKLRKEEVGTHAQKDNPKKKEEKELRKEID
EELENGKKEEKNGQEENKTEASRQQHEDQAEKSNEEKKLDQSEDVSEMKN
TDDENENRKNSTSTQSMTASKEKSADDSKPVDGNDGEEKEEKIQNEEQEQ
NVSETEEAKMSQLEDSKVQNTKSNESVVDQSYHDNMSMGGMGIPQSRLLE
EADKLDEQKMAQKLDKNEEEENDDKSIGSKIKENIKEDKKGSSEINKDIL
KKIGDKKKESDESKLDVLKDVGDKMMKTKNDRHKEKKEGEEKVPEVNKKL
AEEKDNGDKKTEDKENGGDNVMDSKNDGNEKKKKDKEKVPEVNKKLAEDK
NDGDKKTEDKGSDVNKDQAVDAKEMKKEKELEIEEKITLAADKDKGDKKD
NDNNDERVSEVKNDGDNNKETIELAEQGKQKKPLSSMEKEFEKALKEKEK
EKKEEVKDTKEASKPSKDSKSSLDDKQIMAYEVEIQKQKSKSTKESEKQK
NSQSDDGKNPSKTNQQQESGKAPNEMKASSEAFNQGGNIGPSSTNQNQES
EKSANQMKGISGSANQNSVDDVYTTMAALANEKNKESLKPLEEKVSSNQN
SVSNKTSVQNQAVLLHQNNMTLNTLSNQQMNQSELANQNGFRSELTNQNG
FQQAFHQKKKEDDHFVTIMGKEAPLITFREDKTKNESLKHMVKELRESLD
AVDNSQTGISNDTNIHRPGETKHDVTESVSNKEETTVQKIKDIKALQAKA
LKNRENAKQLFKAYKVLKAYKSLLQTMKNRNKTGEMLKTLSNYTAGSLQY
MNDKVKEKANARALGDTTSQEQVVEGEMMKLKKIDEAKEKEIASKGINEY
LGSSQKMEDLSKITESSKRDEKVSTESSQHQGNDKAAKNNEVTTENKKTT
TQDGKVTAANNEVSTQVEKITAKNNEIATQNEKVTATNNEDMTQNEKITA
KNNEVTTQNEKVTATKNEVTTQNEKDTPHLKEISMTKKEDVHDEHITEAD
REKERFKLAQMKLQNEQSEQAMVERQTQQNQASNTNGLQGDSVQPVSQKH
TGSEATQPSEGNSEPKKMGKFKTDVLAKQIKMLQEMKQKLENVQQKSNQG
GVFLNGKDQSVTSSKIGNTTDKKLTNDGAPARQKDQSVTNEKAGNTPPEG
ITDKKSTNGGEPKKLKEEQPAFDPYSNFRRSHLVDRIKTKKARNHKRKNI
PMMPN
Run BLAST on NCBI

transcript from alignment at scaffold_498:114155..117963

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069380 ID=TCONS_00069380|Name=TCONS_00069380|organism=Clytia hemisphaerica|type=transcript|length=3809bp|location=Sequence derived from alignment at scaffold_498:114155..117963 (Clytia hemisphaerica)
GAGGAGAAGAtgaagaaagaggaaaaaaaagaaaagaataacgATAAAGA GAATGTGAAAGTAGAGAAATTACAAAGCGACGAAAAGAAGACGAAGGAAG AAGAAGAGGAAGAGATGAAAAATGCgagcgaagaagaaaaaatgctaATA GATGAGGGACTACGACCGGAGGAAAAATTATCGAAGaacgaaaaaaacaa acagaaagaGGAAAAGCTACGGAAAGAAGAGGTTGGTACGCATGCGCAGA AAGATAATCCAAAAAAGAAGGAGGAGAAGGAGCTACGGAAGGAAATTGAT GAAGAATTAGAGAacggaaaaaaggaagaaaagaatGGTCAGGAAGAAAA CAAAACCGAAGCTTCTAGACAACAACATGAAGATCAAGCGGAAAAATCGa atgaagaaaagaaattgGACCAATCAGAAGATGTATCTGAGATGAAGAAC ACAGATGATGAGAATGAAAATCGAAAGAATAGCACATCAACACAATCGAT GACAGCTTCCAAAGAAAAATCAGCTGATGATTCAAAACCTGTCGATGGTA ACGATGgagaagagaaagaagaaaaaatacaaaatgaagAACAAGAACAA AATGTAAGTGAAACAGAAGAAGCAAAGATGAGCCAGCTTGAGGATTCCAA AGTGCAAAATACGAAGAGCAATGAATCGGTGGTGGATCAGAGTTACCATG ACAACATGTCTATGGGAGGAATGGGTATCCCGCAATCAAGACTCCTTGAA GAGGCAGACAAACTTGACGAGCAAAAGATGGCGCAGAAGcttgataaaaa tgaagaagaggaGAATGATGACAAATCAATTGGGTCGAAAATCAAGGAGA ATATCAAAGAAGATAAGAAAGGCTCCAGCGAAATAAACAAGGATATACTC AAAAAGATAGGAGATAAGAAAAAAGAGAGCGATGAATCGAAGTTGGATGT GCTGAAAGATGTTGGAGATAAAATGATGAAGACGAAAAATGATAGACATA AAGAGAAAAAGGAAGGTGAAGAAAAAGTACCCGAGGTCAACAAGAAGTTA GCAGAAGAAAAGGATAACGGAGATAAAAAGACAGAGGATAAAGAAAATGG TGGAGATAATGTAATGGATTCCAAGAATGATggaaatgaaaagaagaaga aagataaagaaaaagTACCCGAGGTCAATAAGAAGTTAGCAGAAGACAAA AATGACGGAGATAAAAAGACAGAGGATAAAGGGAGTGACGTAAATAAAGA CCAAGCTGTTGATGCAAAGgaaatgaagaaagaaaaagaattggAAATTG AAGAAAAGATAACGTTAGCAGCAGACAAGGATAAGGGAGATAAGAAGGAT AATGACAACAACGATGAAAGGGTATCGGAAGTGAAGAATGACGGAGATAA TAATAAAGAAACAATTGAACTTGCAGAACAAGGCAAACAGAAGAAACCAT TGTCAAGTatggaaaaagaatttgaaaaagctttgaaagaaaaggaaaag gaGAAAAAGGAAGAAGTTAAGGATACAAAAGAAGCATCTAAACCATCAAA AGATTCCAAAAGCTCACTTGATGATAAACAGATCATGGCTTACGAAGTGG AAATCCAAAAACAGAAgtcaaaatcaacaaaagaatCTGAAAAACAGAAG AACAGCCAATCAGATGATGgtaaaaatccatcaaaaaccaaTCAGCAACA GGAATCTGGTAAAGCACCCAATGAAATGAAAGCAAGTTCCGAAGCATTCA ATCAGGGTGGAAATATCGGTCCTtcttcaaccaatcaaaatcaagAGTCT GAAAAATCAGCCAATCAAATGAAAGGAATTTCTGgatcagccaatcagaa ttcagTTGATGATGTTTACACTACAATGGCAGCTTTGGCGAATGAGAAAA ACAAAGAGTCATTAAAGCCTTTAGAAGAAAAAGTATCATCGAATCAGAAT TCAGTTTCAAATAAAACGTCTGTTCAAAACCAAGCTGTTTTACTCCATCA AAATAATATGACATTAAACACTTTATCCAATCAGCAGATGAATCAATCAG AATTAGCCAATCAAAATGGTTTCCGGTCCgaattgaccaatcagaatggA TTTCAACAAGCTTTCCAccagaaaaagaaagaagatgaTCATTTTGTTAC AATAATGGGTAAAGAAGCTCCATTGATCACTTTCCGTGAGGATAAAAcga aaaatgaaagtttgaaacataTGGTTAAAGAACTGAGAGAATCTTTAGAC GCTGTCGATAATTCACAGACCGGAATATCAAACGATACAAATATCCACCG ACCTGGAGAGACTAAACATGACGTCACTGAATCAGTATCTAACAAGGAAG AAACGACAGTCCAGAAAATCAAGGATATTAAAGCCTTACAAGCTAAAGCG CTGAAGAATAGAGAAAATGCTAAACAACTGTTTAAAGCGTACAAGGTTTT GAAGGCATACAAAAGTCTGCTGCAAACgatgaaaaatcgaaataaaactG GAGAAATGTTGAAAACATTGTCCAATTATACTGCGGGGAGTTTGCAATAT ATGAATGACAAAGTGAAAGAAAAGGCTAATGCGCGTGCGCTGGGTGATAC CACAAGTCAAGAGCAGGTTGTTGAAGGAGAGATgatgaaattgaagaaaa ttgacGAAGCAAAGGAAAAAGAGATTGCTTCGAAAGGAATTAACGAGTAT CTTGGAAGTTCGCAAAAAATGGAAGACCTTTCAAAGATTACTGAAAGCAG CAAGCGAGATGAAAAAGTCTCAACCGAATCTTCGCAACATCAAGGAAATG ACAAAGCAGCAAAGAACAATGAGGTTACGACAGAGAACAAAAAGACTACG ACACAAGATGGAAAGGTTACGGCGGCGAACAATGAAGTTTCAACACAAGT TGAAAAAATCAcggcaaaaaataatgaaattgcGACACAAAATGAAAAGG TTACGGCAACGAATAATGAAGATATGACACAAAATGAGAAAATCACGGCA AAGAATAATGAAGTTACGACGCAAAATGAAAAGGTTACGGCAACAAAAAA TGAAGTTACGACACAAAATGAGAAAGATACGCCACACCTGAAAGAGATTT CGATGACCAAGAAAGAAGATGTACATGACGAACATATAACAGAGGCGGAT AGGGAAAAGGAGCGTTTCAAGTTAGCTCAAATGAAACTTCAAAACGAACA AAGTGAACAAGCCATGGTTGAAAGACAAACTCAACAAAACCAGGCATCGA ATACAAATGGACTTCAGGGCGATTCTGTTCAGCCTGTAAGTCAAAAACAC ACTGGAAGTGAAGCTACTCAACCTAGTGAAGGTAATTCAGAACCtaagaa aatgggaaaattcaAAACTGACGTTTTAGCAAAACAAATCAAGATGTTAC AAGAGATGAAACAAAAGTTAGAAAATGTACAACAGAAATCCAACCAAGGA GGAGTGTTTTTGAATGGAAAGGACCAATCAGTGACGTCTTCAAAGATAGG AAACACTACGGATAAGAAATTAACCAATGATGGAGCTCCTGCAAGACAAA AGGACCAATCAGTGACAAACGAAAAGGCAGGAAACACTCCACCGGAGGGT ATTACAGacaaaaaatcaaccaatggaggagagccAAAGAAACTCAAAGA AGAACAACCAGCTTTTGATCCTTATAGCAATTTCAGGAGATCGCATTTAG TAGATCGTATAAAAACCAAGAAAGCAAGAAATCACAAACGTAAAAATATT CCCATGATGCCGAATTGATGACGTTATTTTCGTAGTGCaacattgatgac gtcatcgga

Coding sequence (CDS) from alignment at scaffold_498:114155..117963

>TCONS_00069380 ID=TCONS_00069380|Name=TCONS_00069380|organism=Clytia hemisphaerica|type=CDS|length=3768bp|location=Sequence derived from alignment at scaffold_498:114155..117963 (Clytia hemisphaerica)
GAGGAGAAGAtgaagaaagaggaaaaaaaagaaaagaataacgATAAAGA
GAATGTGAAAGTAGAGAAATTACAAAGCGACGAAAAGAAGACGAAGGAAG
AAGAAGAGGAAGAGATGAAAAATGCgagcgaagaagaaaaaatgctaATA
GATGAGGGACTACGACCGGAGGAAAAATTATCGAAGaacgaaaaaaacaa
acagaaagaGGAAAAGCTACGGAAAGAAGAGGTTGGTACGCATGCGCAGA
AAGATAATCCAAAAAAGAAGGAGGAGAAGGAGCTACGGAAGGAAATTGAT
GAAGAATTAGAGAacggaaaaaaggaagaaaagaatGGTCAGGAAGAAAA
CAAAACCGAAGCTTCTAGACAACAACATGAAGATCAAGCGGAAAAATCGa
atgaagaaaagaaattgGACCAATCAGAAGATGTATCTGAGATGAAGAAC
ACAGATGATGAGAATGAAAATCGAAAGAATAGCACATCAACACAATCGAT
GACAGCTTCCAAAGAAAAATCAGCTGATGATTCAAAACCTGTCGATGGTA
ACGATGgagaagagaaagaagaaaaaatacaaaatgaagAACAAGAACAA
AATGTAAGTGAAACAGAAGAAGCAAAGATGAGCCAGCTTGAGGATTCCAA
AGTGCAAAATACGAAGAGCAATGAATCGGTGGTGGATCAGAGTTACCATG
ACAACATGTCTATGGGAGGAATGGGTATCCCGCAATCAAGACTCCTTGAA
GAGGCAGACAAACTTGACGAGCAAAAGATGGCGCAGAAGcttgataaaaa
tgaagaagaggaGAATGATGACAAATCAATTGGGTCGAAAATCAAGGAGA
ATATCAAAGAAGATAAGAAAGGCTCCAGCGAAATAAACAAGGATATACTC
AAAAAGATAGGAGATAAGAAAAAAGAGAGCGATGAATCGAAGTTGGATGT
GCTGAAAGATGTTGGAGATAAAATGATGAAGACGAAAAATGATAGACATA
AAGAGAAAAAGGAAGGTGAAGAAAAAGTACCCGAGGTCAACAAGAAGTTA
GCAGAAGAAAAGGATAACGGAGATAAAAAGACAGAGGATAAAGAAAATGG
TGGAGATAATGTAATGGATTCCAAGAATGATggaaatgaaaagaagaaga
aagataaagaaaaagTACCCGAGGTCAATAAGAAGTTAGCAGAAGACAAA
AATGACGGAGATAAAAAGACAGAGGATAAAGGGAGTGACGTAAATAAAGA
CCAAGCTGTTGATGCAAAGgaaatgaagaaagaaaaagaattggAAATTG
AAGAAAAGATAACGTTAGCAGCAGACAAGGATAAGGGAGATAAGAAGGAT
AATGACAACAACGATGAAAGGGTATCGGAAGTGAAGAATGACGGAGATAA
TAATAAAGAAACAATTGAACTTGCAGAACAAGGCAAACAGAAGAAACCAT
TGTCAAGTatggaaaaagaatttgaaaaagctttgaaagaaaaggaaaag
gaGAAAAAGGAAGAAGTTAAGGATACAAAAGAAGCATCTAAACCATCAAA
AGATTCCAAAAGCTCACTTGATGATAAACAGATCATGGCTTACGAAGTGG
AAATCCAAAAACAGAAgtcaaaatcaacaaaagaatCTGAAAAACAGAAG
AACAGCCAATCAGATGATGgtaaaaatccatcaaaaaccaaTCAGCAACA
GGAATCTGGTAAAGCACCCAATGAAATGAAAGCAAGTTCCGAAGCATTCA
ATCAGGGTGGAAATATCGGTCCTtcttcaaccaatcaaaatcaagAGTCT
GAAAAATCAGCCAATCAAATGAAAGGAATTTCTGgatcagccaatcagaa
ttcagTTGATGATGTTTACACTACAATGGCAGCTTTGGCGAATGAGAAAA
ACAAAGAGTCATTAAAGCCTTTAGAAGAAAAAGTATCATCGAATCAGAAT
TCAGTTTCAAATAAAACGTCTGTTCAAAACCAAGCTGTTTTACTCCATCA
AAATAATATGACATTAAACACTTTATCCAATCAGCAGATGAATCAATCAG
AATTAGCCAATCAAAATGGTTTCCGGTCCgaattgaccaatcagaatggA
TTTCAACAAGCTTTCCAccagaaaaagaaagaagatgaTCATTTTGTTAC
AATAATGGGTAAAGAAGCTCCATTGATCACTTTCCGTGAGGATAAAAcga
aaaatgaaagtttgaaacataTGGTTAAAGAACTGAGAGAATCTTTAGAC
GCTGTCGATAATTCACAGACCGGAATATCAAACGATACAAATATCCACCG
ACCTGGAGAGACTAAACATGACGTCACTGAATCAGTATCTAACAAGGAAG
AAACGACAGTCCAGAAAATCAAGGATATTAAAGCCTTACAAGCTAAAGCG
CTGAAGAATAGAGAAAATGCTAAACAACTGTTTAAAGCGTACAAGGTTTT
GAAGGCATACAAAAGTCTGCTGCAAACgatgaaaaatcgaaataaaactG
GAGAAATGTTGAAAACATTGTCCAATTATACTGCGGGGAGTTTGCAATAT
ATGAATGACAAAGTGAAAGAAAAGGCTAATGCGCGTGCGCTGGGTGATAC
CACAAGTCAAGAGCAGGTTGTTGAAGGAGAGATgatgaaattgaagaaaa
ttgacGAAGCAAAGGAAAAAGAGATTGCTTCGAAAGGAATTAACGAGTAT
CTTGGAAGTTCGCAAAAAATGGAAGACCTTTCAAAGATTACTGAAAGCAG
CAAGCGAGATGAAAAAGTCTCAACCGAATCTTCGCAACATCAAGGAAATG
ACAAAGCAGCAAAGAACAATGAGGTTACGACAGAGAACAAAAAGACTACG
ACACAAGATGGAAAGGTTACGGCGGCGAACAATGAAGTTTCAACACAAGT
TGAAAAAATCAcggcaaaaaataatgaaattgcGACACAAAATGAAAAGG
TTACGGCAACGAATAATGAAGATATGACACAAAATGAGAAAATCACGGCA
AAGAATAATGAAGTTACGACGCAAAATGAAAAGGTTACGGCAACAAAAAA
TGAAGTTACGACACAAAATGAGAAAGATACGCCACACCTGAAAGAGATTT
CGATGACCAAGAAAGAAGATGTACATGACGAACATATAACAGAGGCGGAT
AGGGAAAAGGAGCGTTTCAAGTTAGCTCAAATGAAACTTCAAAACGAACA
AAGTGAACAAGCCATGGTTGAAAGACAAACTCAACAAAACCAGGCATCGA
ATACAAATGGACTTCAGGGCGATTCTGTTCAGCCTGTAAGTCAAAAACAC
ACTGGAAGTGAAGCTACTCAACCTAGTGAAGGTAATTCAGAACCtaagaa
aatgggaaaattcaAAACTGACGTTTTAGCAAAACAAATCAAGATGTTAC
AAGAGATGAAACAAAAGTTAGAAAATGTACAACAGAAATCCAACCAAGGA
GGAGTGTTTTTGAATGGAAAGGACCAATCAGTGACGTCTTCAAAGATAGG
AAACACTACGGATAAGAAATTAACCAATGATGGAGCTCCTGCAAGACAAA
AGGACCAATCAGTGACAAACGAAAAGGCAGGAAACACTCCACCGGAGGGT
ATTACAGacaaaaaatcaaccaatggaggagagccAAAGAAACTCAAAGA
AGAACAACCAGCTTTTGATCCTTATAGCAATTTCAGGAGATCGCATTTAG
TAGATCGTATAAAAACCAAGAAAGCAAGAAATCACAAACGTAAAAATATT
CCCATGATGCCGAATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043233XLOC_043233Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069380-exon-scaffold_498-1491911889:114155..117963TCONS_00069380-exon-scaffold_498-1491911889:114155..117963Clytia hemisphaericaexon
TCONS_00069380-exon-scaffold_498-1510915933:114155..117963TCONS_00069380-exon-scaffold_498-1510915933:114155..117963Clytia hemisphaericaexon
TCONS_00069380-exon-scaffold_498-1575043694:114155..117963TCONS_00069380-exon-scaffold_498-1575043694:114155..117963Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069380-proteinTCONS_00069380-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_498supercontigscaffold_498:114155..117963 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.0111583 0.0327498 0.0398698 0.0630112 6.9432 9.71462 2.71559 2.03673 3.09515 2.12652 7.00644 6.50711 3.55343 11.0378 5.87406 5.94489 0.062856 0 4.11623 3.38808 1.68362 1.9313 5.69247 8.38548 0.17567 0.0721075 0.0218764 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069380 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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