TCONS_00069374 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069374
Unique NameTCONS_00069374
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1279

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069374 ID=TCONS_00069374|Name=TCONS_00069374|organism=Clytia hemisphaerica|type=transcript|length=1279bp
AATAANAAAGGACATTTCATTTTGGAAATCTGAACTAGATAGACAATATA
AAGAAACAGAAGATGAAATAAAACGAATGATTGAGTATAAAAATCGCTTA
GAAGTAGCTCTGAATGCCACTGAAATACCATTGCACATTGCTAAAGAGTG
CcttcaaaacagacaaaaaagaATGTCAATAGATCTTGTTCATGATGATG
TAGAAGTTCAATTACTAAAGGAGGTAGAAATTATCGAGGGTGTCCAAGCA
ATGCTGAGAAGAACTTTAGACCAAGCAACAGAACAAATCAGATTACTTCG
ATCTGCAAACCACTATCTTGGCAAGGATATCGGTGATAAATTTTCTGCAT
TAGGTATTGATGATCATTGTGCTGGGTTAGGCAACGATTCCCCACAGAAA
TATTTTGCTCCTGGTGCTGTCAAAGTTCAAGCAAACTCCATAACCACAGA
agaatgggaaaaattttccaataaaaatGTCTTGAAAGCTGAACGTGAAC
GAAATTCTGCCGTCACTATTGAGTCAATGATTGAAGAAATTTTACAAGAG
ACTTTTGAAGACCAACAAAAACAATGTGATAACGTCAACTTGGCCTTCGA
AAAACGTATTGAAGAGACTTCAAAAGCTAAAGCAAAGCTTGAAGACCATC
TAGTAAAGGTTAACCAAGAAATTACTGATATGGAATCAAATATCGATATG
TTGAACCAAGCTATTAATGGCAAATTGTCACCCATGCAAGTGTCACAAAC
CAGATTGGACACACGAGCTCACCGCCCTAATGCTGAACTTTGTCGTGACC
AAGTCCAATATAAACTGATCAGTGAGGTTGGTGAAATCAGTGAGAACATC
GAGCGCTTACAACAAGCATTGCGTGAATCAGAAGATAACTTGAAAGGATT
AAGTCGTCAACAATTACGCTTAGAAGAAGATATCGAAATTAAAGCCAACA
CCTTATTCATTGACCGGGATCAAAACATGACAATACGTAAGCAAATCCAA
CACCAAAAATATTAATAATTTCTTCTACTTTTCATTTCTACTTTTACCTT
AGTTTTTtatatcaataaaaaatttggtttgtttttgtatataaAGAATA
GAATGATCATTAATCCCTACTTATAACTCTAAACACAATATTActttttg
tttgtaaaaatattttttgattgctTATCTTATTTTCTAACTGAGAAAAG
AAAACATGACACTATTTCTAAAATTGTATCAtttatttctttattctgaa
aTAGTTCTAGCCAAATTGACCAAATCAGC
Run BLAST on NCBI

protein sequence of TCONS_00069374-protein

>TCONS_00069374-protein ID=TCONS_00069374-protein|Name=TCONS_00069374-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
IXKDISFWKSELDRQYKETEDEIKRMIEYKNRLEVALNATEIPLHIAKEC
LQNRQKRMSIDLVHDDVEVQLLKEVEIIEGVQAMLRRTLDQATEQIRLLR
SANHYLGKDIGDKFSALGIDDHCAGLGNDSPQKYFAPGAVKVQANSITTE
EWEKFSNKNVLKAERERNSAVTIESMIEEILQETFEDQQKQCDNVNLAFE
KRIEETSKAKAKLEDHLVKVNQEITDMESNIDMLNQAINGKLSPMQVSQT
RLDTRAHRPNAELCRDQVQYKLISEVGEISENIERLQQALRESEDNLKGL
SRQQLRLEEDIEIKANTLFIDRDQNMTIRKQIQHQKY
Run BLAST on NCBI

transcript from alignment at scaffold_498:509293..516433-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069374 ID=TCONS_00069374|Name=TCONS_00069374|organism=Clytia hemisphaerica|type=transcript|length=7141bp|location=Sequence derived from alignment at scaffold_498:509293..516433- (Clytia hemisphaerica)
AATAANAAAGGACATTTCATTTTGGAAATCTGAACTAGATAGACAATATA
AAGAAACAGAAGATGAAATAAAACGAATGATTGAGTATAAAAATCGCTTA
GAAGTAGCTCTGAATGCCACTGAAATACCATTGCACATTGCTAAAGAGTG
CCTTCAAAACAGACAAAAAAGAATGTCAATAGATCTTGTTCATGATGATG
TAGAAGTTCAATTACTAAAGGTATAAATTAACTCTTTTAAACGCACATCA
TATCAACCCGCCCTGCTGTCAACAAGGTGTTGCACCACCAGAATGGCACC
TGTGCTGAAAAGTTTTATTAAGACAGTAAGACTGGACAAACGTATCTGGT
TTTTCTCTAAGTGTTGCACTATATACATTAAATTTTGGCACCCAAACAAA
CACAGTCATGCTTAACAAAACCAGCAGGCGTTACTAATCGATATAATAAT
CGATTAAAATCGATTATAATTGATAGCTAATCGATAATTAATCGATTGAT
TAAGAACAATAATCTATAGCTAATCGATACTCACAATTTTTTAGCGCTCA
CTAAATTATCACCATAGATTTTTAATCGATAATATCGTACAGTGTTAATA
ATTGATAATATTGATATAATCAATACTCACATTTTTTTAGGCACCGATTA
TTTATCGATTATTGTTTTTAATCAATATTTAATCAATCGATTAATTATCG
AAATAGCTATTGATTTTATGGATTAGTAACATCTGGTTAAAACTGTAGGC
ATACACTAAGACGACCACGGTAGAGTATATATACACCTAATATACTCAGA
TATTTTACTTGTGCCAAGGGATTGATGTCTTGGAATAGTTGTTTGGGAGA
ACGCAACGGTCTATTGAATAACAAATTACTTCACATATTAATGACGTCAT
CATTAAAAACAGTCCTGCTGGAGTAACTACCGAGAGATGGGGTAACTTGC
ATCAGCGGAGGTTAACATGCATAGCCCTCGCTCAAATGAATGACCTGGAT
AGAGATAGATATCCTATGTCCTACCCACAATGGAGTAGGAATCACAACAC
AAGCAAACATTACGCGCCATGGTGTGGTGTATACCACGACACTCGAACTA
CACGGGAGAACAGATGTCCTCGCAGGTGTAGAACCTCTTAAGTGTCTCAG
CACACCACAATGTCTGGAATATCTACCCATACTCTTGTATCAGAGTTATG
GTACTCAATTCCCCTCACATGGCATGGGTTGATACAGGCGGAGCATTCAC
ATGCCAACAAGTGAATTGTACCGTAACTTGGTCTAATGTCTACATCCCTC
GTCATAATTCGACACCCTTTTCTAGAGCTGAAAAATAAAAAAAAGATTGA
AATTATTTTTCTTTGCTTAGTGGTAAGGAAGAAAGAAGGGTGTCGAAATT
AGAAGACCGATGTCGAGACTAGACCAACTTACGGTAGTGCCACGGTGAGT
ATCGAACTCTGGCCTCCTTGACAGAAGTCAAGCACAATAGCCACTATACC
AGCCACACATACATACTACATATACATACTAATAATAATAATAATAATAA
TAATAACGAATGTTTTAAGTGGCTGGCTCCGAAAAATTCTAGAGCTTTTA
GACAGCTCAAGAATTGTTTCCACGANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTGTATGAATTCCGAAAAAAGGGGAT
AAAAACTTTATAATACCGAAATTCCGAAGCAAAAATTCATGGATTTCCGA
TACCGAAATAATTTCAGCATTCCGAAATACCGAAGGAATTTTGCCCGATT
TCCAAAATTCCGAAGAAAAAAGGGTCAATCTCCGCAATTCCGAAATACCG
TACGCCCCCACTGCCAATGCGGGAGAGTTGACAGTTATGCAATATGTAGA
GGGAGAGCGGAGAGTATATGATTTGTTCTGGTGGACCCGTTCTTATGCTG
CAATCCTGACACAAGGGTCCTCATATTATCTCAGGAATCTGCGAGTTTGT
AGATTAAGGATGCTCATTTGTTTAGGGGCTTTTTACACTGTTGAGGGACC
CTTGAAAGGTTATGTATGTGAATTGAATGTTTTTAAAACCAATGTTATAA
TGATGTTATGTCTCAGTATACTCAGGTATACAGTAAGGTCTAAGTATGCT
AATAGTTGTTTGATGTTTCATTTTTAATGGTTTTCAAATGTCAAAAATAA
TTAGACAGGGAGATTTCTCTCGATGAGTTGATAAGAGAAATAGGGTCACT
TTTGAAATTTAGACCACATGATCCTGACTTATGACCTCTAAAGTCCAAAA
AATGACGATTTTGATGATGTCATTACTGAGAGGGATAAATTGGAACGTCA
ACGAGCTAATCATTTAGCCCTGATTAGTATGTTTAAACCAACCGTTGAGG
AGATATAACGATTTTAATAAAAATTTATTTAAAGATCGAAAAAAAGTGCT
GACCCTCAGCAAAGATAAGGGTTATAAACGATTTTATCTGGGCCTGTATC
TCGCCAACGGCTGATCTAAACATATTAAACCATATATTATAAACCTTACA
TTGAAACACTAAAATTGTAAGATGCACATAACAATCTAAGACTGTTCAAA
AATTTATTTTGATAAAAGGAAGGTCACATCAACTCAAGATTTTCTTAAAA
ATTTCCATTAAAATAAAAAAAGTAAACAAACATCTAATAGTTTTCCTGGT
AACTGTAATTGCAATTGACAGCCAACTGAACTGGTTTTTTTTTCGGTTTT
GTAAGACCAATTTCATTAAAATTTTAAACTTTACTGTACAGACACCAATT
TACTTTATTATTCGTTTTATTTTAAGGAGGTAGAAATTATCGAGGGTGTC
CAAGCAATGCTGAGAAGAACTTTAGACCAAGCAACAGAACAAATCAGGTT
AGTAATTTCGTCTTATTCTCTAACTAAAGTCTAATAAAACTAACTGGAAA
TAGTAGAGTAAGTAAGTATATTGAACAAAAACTGGGGAATAAAAGTTATT
TTAGATAATGCATGAGAAAGTGGAAGAAAACCCTACACCGAGTTGGTAAA
AGGTAAAATTTCAACTGAGATATACAAAAGATTTCATAACTTCATGGAGC
TAACAATAACTTCTATGGAATGTAACTTTTTTAATAATTGTCAATGTTTC
ACCAAAGTTTGGCACGGACTTTATTTACTCACTTCTCACAAAAAGCTCTG
TGTATAGGGGGGGCCCTGTATAGGTCTGTAGATTGTCTGCTTATGGTTAA
TAAAAAGGGAATTTGTCTTAACCCGGGTTCTAAAGATAGAAACAGACGTT
CCCTGTCCTTGATCTAAAGAAGTATTTTTATTCCTTTTAGATTACTTCGA
TCTGCAAACCACTATCTTGGCAAGGATATCGGTGATAAATTTTCTGCATT
AGGTATTGATGATCATTGTGCTGGGTTAGGCAACGATTCCCCACAGAAAT
ATTTTGCTCCTGGTGCTGTCAAAGTTCAAGCAAAGTATGTATCTCTATTT
ACCATGGCTGAGTCATTTTTCTGGATATAACATCGAATAAAAAAAGAAAA
ATTTCATATGGCCAATCAGTGCTAGAGGCTGTAACTTTTGAAAGAATTTC
AATCACATAGTTGAAAAGATATGGAATCAANGTGGCCAATCAGTGCTAGA
CGCTAGAGGCTGTAACTTTTGATAGAATTTCAATCACATAGTTGAAAAGA
TATGGAATCAAAGAGTGAAACATAATGAAAATAAAATGTAAAAAAATCAT
AGCAAATTTGAAAAATGCAGATGAAGATGAAAAAAAATCAACTTCTTATA
AAATTGAGCAATAATTACCATTTTTGCCCCAGCAAATAGCAAAAATCACT
TTTCATGTGAAAAAGTGAAACTGTTAATTAGAGAACAGTTCTTCAAGATC
TCTCTTTCCTACTATTTTCATCTTCATTTTTTAGATTTTTTTCGAAATTT
ACTGAAAATTTTCCACACAATGTCTTGTCAACAAGCACGAACTAATTTTA
TTCAAATTCTACCATAAAAGTTACTTTTTTTGAAAAAAAACATGGAATTT
CAATCCTCATCAAATTTTGGTTCCTTATTTTTATCCCACTCACTGAAAAA
ATCCTACCGTGTCTGAGAGAAGAGTTTTTTTCTATTTTTCTTTCCATTTT
CTTTCTTCACTTAGCTCCATAACCACAGAAGAATGGGAAAAATTTTCCAA
TAAAAATGTCTTGAAAGCTGAACGTGAACGAAATTCTGCCGTCACTATTG
AGTCAATGATTGAAGAAATTTTACAAGAGACTTTTGAAGACCAACAAAAA
CAATGTGATAACGTCAACTTGGCCTTCGAAAAACGTATTGAAGAGACTTC
AAAAGCTAAAGCAAAGCTTGAAGACCATCTAGTAAAGGTAATTCAAACAC
GTATCCGTGGTCTTTTAAAAATCAAAAAACGTATTTTGAAATCTTAGTAC
CTTTAATCTTAAACTGGACACGAAGCGCTCTTGTGGTGATAAATCTATAT
AATAATTTCCTTACTTGTCAAAAACGTTTACCATTTTGAAACACATTTTG
GATTCATTTTTATCGGAAATTGTAATTTAGATCTATTCCAGTGTTTTGGC
GTCAAAAGGCAAAAAGTCAACCTTCTAGACTATATAGCCTAGCTTGGAAA
GCTTGTTTTTCACTGTTTAAAGACATAAACATTCTCATCTAGGTTAACCA
AGAAATTACTGATATGGAATCAAATATCGATATGTTGAACCAAGCTATTA
ATGGCAAATTGTCACCCATGCAAGTGTCACAAACCAGATTGGACACACGA
GCTCACCGCCCTAATGCTGAACTTTGTCGTGACCAAGTCCAATATAAACT
GATCAGTGAGGTATCGATCTAGATTGTCGTCTTTATAAGATTTTTAAAAT
CAGCATGTATTTTATTCACAAACAAATTTCACTCAATTTCATATTTTCAA
ATTCTATATTCTGATTCATGTTTTTTAACACCAGGCTGAAATCAATTTGG
CATTTAAAATTTTAAATTGTTGGAGGGGTTGTTTTTAACTATTTTTTTTT
CTTACAAAAAATTCTGAATTGAAACTACCGCCTTAAATGTTACTCTTCAA
AGCTCGAAATCTGCTGAAAGACCACTTACCTGTATTAAAACCCCAGGCTA
AACTTATCCTTGGTGGAAATTTAATTTGGCGGATGGCCGAAAAAGCTTTT
TCAGAGAAGATTCCATTTGGTGGGATTAAATACACTATTGTCAAAAAACG
CCATTTAATAAAAAAACTGTCGAAGGCCTGAAATAGAGATGCCTTAGATT
TTTACAAGGTACTTCACTAATTGGTCATTTAAAGTGATATGGATGACGCG
TTCTTTAGAAAAAGTAATAAGATTCTTTTATTACATCTTAACGACCAACC
AAATCAAATAAGAGCTTGTAAAAACTCCAGCTTGTCCCCTGAAATAGCAC
ACATTTGGGGGAATAAATACAATAATTTAAATTCGGTGGGAACTTAATTT
GGCGGATTATTGACCAAACCCATCATCATTTTTTCGGCCAAAATTTCTTT
CCTCAAGTTAATATCTTCCTCTCTCCTAAATTTTGCAGGTTGGTGAAATC
AGTGAGAACATCGAGCGCTTACAACAAGCATTGCGTGAATCAGAAGATAA
CTTGAAAGGATTAAGTCGTCAACAATTACGCTTAGAAGAAGATATCGAAA
TTAAAGCCAACACCTTATTCATTGACCGGGATCAAAACATGACAATACGT
AAGCAAATCCAACACCAAAAATATTAATAATTTCTTCTACTTTTCATTTC
TACTTTTACCTTAGTTTTTTATATCAATAAAAAATTTGGTTTGTTTTTGT
ATATAAAGAATAGAATGATCATTAATCCCTACTTATAACTCTAAACACAA
TATTACTTTTTGTTTGTAAAAATATTTTTTGATTGCTTATCTTATTTTCT
AACTGAGAAAAGAAAACATGACACTATTTCTAAAATTGTATCATTTATTT
CTTTATTCTGAAATAGTTCTAGCCAAATTGACCAAATCAGC

Coding sequence (CDS) from alignment at scaffold_498:509293..516433-

>TCONS_00069374 ID=TCONS_00069374|Name=TCONS_00069374|organism=Clytia hemisphaerica|type=CDS|length=6084bp|location=Sequence derived from alignment at scaffold_498:509293..516433- (Clytia hemisphaerica)
GTTGGTGAAATCAGTGAGAACATCGAGCGCTTACAACAAGCATTGCGTGA
ATCAGAAGATAACTTGAAAGGATTAAGTCGTCAACAATTACGCTTAGAAG
AAGATATCGAAATTAAAGCCAACACCTTATTCATTGACCGGGATCAAAAC
ATGACAATACGTAAGCAAATCCAACACCAAAAATATTAAGTTAACCAAGA
AATTACTGATATGGAATCAAATATCGATATGTTGAACCAAGCTATTAATG
GCAAATTGTCACCCATGCAAGTGTCACAAACCAGATTGGACACACGAGCT
CACCGCCCTAATGCTGAACTTTGTCGTGACCAAGTCCAATATAAACTGAT
CAGTGAGCTCCATAACCACAGAAGAATGGGAAAAATTTTCCAATAAAAAT
GTCTTGAAAGCTGAACGTGAACGAAATTCTGCCGTCACTATTGAGTCAAT
GATTGAAGAAATTTTACAAGAGACTTTTGAAGACCAACAAAAACAATGTG
ATAACGTCAACTTGGCCTTCGAAAAACGTATTGAAGAGACTTCAAAAGCT
AAAGCAAAGCTTGAAGACCATCTAGTAAAGATTACTTCGATCTGCAAACC
ACTATCTTGGCAAGGATATCGGTGATAAATTTTCTGCATTAGGTATTGAT
GATCATTGTGCTGGGTTAGGCAACGATTCCCCACAGAAATATTTTGCTCC
TGGTGCTGTCAAAGTTCAAGCAAAGAGGTAGAAATTATCGAGGGTGTCCA
AGCAATGCTGAGAAGAACTTTAGACCAAGCAACAGAACAAATCAGATAAN
AAAGGACATTTCATTTTGGAAATCTGAACTAGATAGACAATATAAAGAAA
CAGAAGATGAAATAAAACGAATGATTGAGTATAAAAATCGCTTAGAAGTA
GCTCTGAATGCCACTGAAATACCATTGCACATTGCTAAAGAGTGCCTTCA
AAACAGACAAAAAAGAATGTCAATAGATCTTGTTCATGATGATGTAGAAG
TTCAATTACTAAAGGTTGGTGAAATCAGTGAGAACATCGAGCGCTTACAA
CAAGCATTGCGTGAATCAGAAGATAACTTGAAAGGATTAAGTCGTCAACA
ATTACGCTTAGAAGAAGATATCGAAATTAAAGCCAACACCTTATTCATTG
ACCGGGATCAAAACATGACAATACGTAAGCAAATCCAACACCAAAAATAT
TAAGTTAACCAAGAAATTACTGATATGGAATCAAATATCGATATGTTGAA
CCAAGCTATTAATGGCAAATTGTCACCCATGCAAGTGTCACAAACCAGAT
TGGACACACGAGCTCACCGCCCTAATGCTGAACTTTGTCGTGACCAAGTC
CAATATAAACTGATCAGTGAGCTCCATAACCACAGAAGAATGGGAAAAAT
TTTCCAATAAAAATGTCTTGAAAGCTGAACGTGAACGAAATTCTGCCGTC
ACTATTGAGTCAATGATTGAAGAAATTTTACAAGAGACTTTTGAAGACCA
ACAAAAACAATGTGATAACGTCAACTTGGCCTTCGAAAAACGTATTGAAG
AGACTTCAAAAGCTAAAGCAAAGCTTGAAGACCATCTAGTAAAGATTACT
TCGATCTGCAAACCACTATCTTGGCAAGGATATCGGTGATAAATTTTCTG
CATTAGGTATTGATGATCATTGTGCTGGGTTAGGCAACGATTCCCCACAG
AAATATTTTGCTCCTGGTGCTGTCAAAGTTCAAGCAAAGAGGTAGAAATT
ATCGAGGGTGTCCAAGCAATGCTGAGAAGAACTTTAGACCAAGCAACAGA
ACAAATCAGATAANAAAGGACATTTCATTTTGGAAATCTGAACTAGATAG
ACAATATAAAGAAACAGAAGATGAAATAAAACGAATGATTGAGTATAAAA
ATCGCTTAGAAGTAGCTCTGAATGCCACTGAAATACCATTGCACATTGCT
AAAGAGTGCCTTCAAAACAGACAAAAAAGAATGTCAATAGATCTTGTTCA
TGATGATGTAGAAGTTCAATTACTAAAGGTTGGTGAAATCAGTGAGAACA
TCGAGCGCTTACAACAAGCATTGCGTGAATCAGAAGATAACTTGAAAGGA
TTAAGTCGTCAACAATTACGCTTAGAAGAAGATATCGAAATTAAAGCCAA
CACCTTATTCATTGACCGGGATCAAAACATGACAATACGTAAGCAAATCC
AACACCAAAAATATTAAGTTAACCAAGAAATTACTGATATGGAATCAAAT
ATCGATATGTTGAACCAAGCTATTAATGGCAAATTGTCACCCATGCAAGT
GTCACAAACCAGATTGGACACACGAGCTCACCGCCCTAATGCTGAACTTT
GTCGTGACCAAGTCCAATATAAACTGATCAGTGAGCTCCATAACCACAGA
AGAATGGGAAAAATTTTCCAATAAAAATGTCTTGAAAGCTGAACGTGAAC
GAAATTCTGCCGTCACTATTGAGTCAATGATTGAAGAAATTTTACAAGAG
ACTTTTGAAGACCAACAAAAACAATGTGATAACGTCAACTTGGCCTTCGA
AAAACGTATTGAAGAGACTTCAAAAGCTAAAGCAAAGCTTGAAGACCATC
TAGTAAAGATTACTTCGATCTGCAAACCACTATCTTGGCAAGGATATCGG
TGATAAATTTTCTGCATTAGGTATTGATGATCATTGTGCTGGGTTAGGCA
ACGATTCCCCACAGAAATATTTTGCTCCTGGTGCTGTCAAAGTTCAAGCA
AAGAGGTAGAAATTATCGAGGGTGTCCAAGCAATGCTGAGAAGAACTTTA
GACCAAGCAACAGAACAAATCAGATAANAAAGGACATTTCATTTTGGAAA
TCTGAACTAGATAGACAATATAAAGAAACAGAAGATGAAATAAAACGAAT
GATTGAGTATAAAAATCGCTTAGAAGTAGCTCTGAATGCCACTGAAATAC
CATTGCACATTGCTAAAGAGTGCCTTCAAAACAGACAAAAAAGAATGTCA
ATAGATCTTGTTCATGATGATGTAGAAGTTCAATTACTAAAGGTTGGTGA
AATCAGTGAGAACATCGAGCGCTTACAACAAGCATTGCGTGAATCAGAAG
ATAACTTGAAAGGATTAAGTCGTCAACAATTACGCTTAGAAGAAGATATC
GAAATTAAAGCCAACACCTTATTCATTGACCGGGATCAAAACATGACAAT
ACGTAAGCAAATCCAACACCAAAAATATTAAGTTAACCAAGAAATTACTG
ATATGGAATCAAATATCGATATGTTGAACCAAGCTATTAATGGCAAATTG
TCACCCATGCAAGTGTCACAAACCAGATTGGACACACGAGCTCACCGCCC
TAATGCTGAACTTTGTCGTGACCAAGTCCAATATAAACTGATCAGTGAGC
TCCATAACCACAGAAGAATGGGAAAAATTTTCCAATAAAAATGTCTTGAA
AGCTGAACGTGAACGAAATTCTGCCGTCACTATTGAGTCAATGATTGAAG
AAATTTTACAAGAGACTTTTGAAGACCAACAAAAACAATGTGATAACGTC
AACTTGGCCTTCGAAAAACGTATTGAAGAGACTTCAAAAGCTAAAGCAAA
GCTTGAAGACCATCTAGTAAAGATTACTTCGATCTGCAAACCACTATCTT
GGCAAGGATATCGGTGATAAATTTTCTGCATTAGGTATTGATGATCATTG
TGCTGGGTTAGGCAACGATTCCCCACAGAAATATTTTGCTCCTGGTGCTG
TCAAAGTTCAAGCAAAGAGGTAGAAATTATCGAGGGTGTCCAAGCAATGC
TGAGAAGAACTTTAGACCAAGCAACAGAACAAATCAGATAANAAAGGACA
TTTCATTTTGGAAATCTGAACTAGATAGACAATATAAAGAAACAGAAGAT
GAAATAAAACGAATGATTGAGTATAAAAATCGCTTAGAAGTAGCTCTGAA
TGCCACTGAAATACCATTGCACATTGCTAAAGAGTGCCTTCAAAACAGAC
AAAAAAGAATGTCAATAGATCTTGTTCATGATGATGTAGAAGTTCAATTA
CTAAAGGTTGGTGAAATCAGTGAGAACATCGAGCGCTTACAACAAGCATT
GCGTGAATCAGAAGATAACTTGAAAGGATTAAGTCGTCAACAATTACGCT
TAGAAGAAGATATCGAAATTAAAGCCAACACCTTATTCATTGACCGGGAT
CAAAACATGACAATACGTAAGCAAATCCAACACCAAAAATATTAAGTTAA
CCAAGAAATTACTGATATGGAATCAAATATCGATATGTTGAACCAAGCTA
TTAATGGCAAATTGTCACCCATGCAAGTGTCACAAACCAGATTGGACACA
CGAGCTCACCGCCCTAATGCTGAACTTTGTCGTGACCAAGTCCAATATAA
ACTGATCAGTGAGCTCCATAACCACAGAAGAATGGGAAAAATTTTCCAAT
AAAAATGTCTTGAAAGCTGAACGTGAACGAAATTCTGCCGTCACTATTGA
GTCAATGATTGAAGAAATTTTACAAGAGACTTTTGAAGACCAACAAAAAC
AATGTGATAACGTCAACTTGGCCTTCGAAAAACGTATTGAAGAGACTTCA
AAAGCTAAAGCAAAGCTTGAAGACCATCTAGTAAAGATTACTTCGATCTG
CAAACCACTATCTTGGCAAGGATATCGGTGATAAATTTTCTGCATTAGGT
ATTGATGATCATTGTGCTGGGTTAGGCAACGATTCCCCACAGAAATATTT
TGCTCCTGGTGCTGTCAAAGTTCAAGCAAAGAGGTAGAAATTATCGAGGG
TGTCCAAGCAATGCTGAGAAGAACTTTAGACCAAGCAACAGAACAAATCA
GATAANAAAGGACATTTCATTTTGGAAATCTGAACTAGATAGACAATATA
AAGAAACAGAAGATGAAATAAAACGAATGATTGAGTATAAAAATCGCTTA
GAAGTAGCTCTGAATGCCACTGAAATACCATTGCACATTGCTAAAGAGTG
CCTTCAAAACAGACAAAAAAGAATGTCAATAGATCTTGTTCATGATGATG
TAGAAGTTCAATTACTAAAGGTTGGTGAAATCAGTGAGAACATCGAGCGC
TTACAACAAGCATTGCGTGAATCAGAAGATAACTTGAAAGGATTAAGTCG
TCAACAATTACGCTTAGAAGAAGATATCGAAATTAAAGCCAACACCTTAT
TCATTGACCGGGATCAAAACATGACAATACGTAAGCAAATCCAACACCAA
AAATATTAAGTTAACCAAGAAATTACTGATATGGAATCAAATATCGATAT
GTTGAACCAAGCTATTAATGGCAAATTGTCACCCATGCAAGTGTCACAAA
CCAGATTGGACACACGAGCTCACCGCCCTAATGCTGAACTTTGTCGTGAC
CAAGTCCAATATAAACTGATCAGTGAGCTCCATAACCACAGAAGAATGGG
AAAAATTTTCCAATAAAAATGTCTTGAAAGCTGAACGTGAACGAAATTCT
GCCGTCACTATTGAGTCAATGATTGAAGAAATTTTACAAGAGACTTTTGA
AGACCAACAAAAACAATGTGATAACGTCAACTTGGCCTTCGAAAAACGTA
TTGAAGAGACTTCAAAAGCTAAAGCAAAGCTTGAAGACCATCTAGTAAAG
ATTACTTCGATCTGCAAACCACTATCTTGGCAAGGATATCGGTGATAAAT
TTTCTGCATTAGGTATTGATGATCATTGTGCTGGGTTAGGCAACGATTCC
CCACAGAAATATTTTGCTCCTGGTGCTGTCAAAGTTCAAGCAAAGAGGTA
GAAATTATCGAGGGTGTCCAAGCAATGCTGAGAAGAACTTTAGACCAAGC
AACAGAACAAATCAGATAANAAAGGACATTTCATTTTGGAAATCTGAACT
AGATAGACAATATAAAGAAACAGAAGATGAAATAAAACGAATGATTGAGT
ATAAAAATCGCTTAGAAGTAGCTCTGAATGCCACTGAAATACCATTGCAC
ATTGCTAAAGAGTGCCTTCAAAACAGACAAAAAAGAATGTCAATAGATCT
TGTTCATGATGATGTAGAAGTTCAATTACTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043228XLOC_043228Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069374-proteinTCONS_00069374-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069374-exon-scaffold_498-1575043694:516214..516433TCONS_00069374-exon-scaffold_498-1575043694:516214..516433Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1575043694:512437..512507TCONS_00069374-exon-scaffold_498-1575043694:512437..512507Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1575043694:511850..511993TCONS_00069374-exon-scaffold_498-1575043694:511850..511993Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1575043694:510947..511169TCONS_00069374-exon-scaffold_498-1575043694:510947..511169Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1575043694:510474..510641TCONS_00069374-exon-scaffold_498-1575043694:510474..510641Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1575043694:509293..509745TCONS_00069374-exon-scaffold_498-1575043694:509293..509745Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1510915933:516214..516433TCONS_00069374-exon-scaffold_498-1510915933:516214..516433Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1510915933:512437..512507TCONS_00069374-exon-scaffold_498-1510915933:512437..512507Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1510915933:511850..511993TCONS_00069374-exon-scaffold_498-1510915933:511850..511993Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1510915933:510947..511169TCONS_00069374-exon-scaffold_498-1510915933:510947..511169Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1510915933:510474..510641TCONS_00069374-exon-scaffold_498-1510915933:510474..510641Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1510915933:509293..509745TCONS_00069374-exon-scaffold_498-1510915933:509293..509745Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1491911889:516214..516433TCONS_00069374-exon-scaffold_498-1491911889:516214..516433Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1491911889:512437..512507TCONS_00069374-exon-scaffold_498-1491911889:512437..512507Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1491911889:511850..511993TCONS_00069374-exon-scaffold_498-1491911889:511850..511993Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1491911889:510947..511169TCONS_00069374-exon-scaffold_498-1491911889:510947..511169Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1491911889:510474..510641TCONS_00069374-exon-scaffold_498-1491911889:510474..510641Clytia hemisphaericaexon
TCONS_00069374-exon-scaffold_498-1491911889:509293..509745TCONS_00069374-exon-scaffold_498-1491911889:509293..509745Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_498supercontigscaffold_498:509293..516433 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
101.062	100.459	153.996	168.108	450.044	340.19	139.65	139.758	73.9866	95.1399	54.9569	59.2908	7.54162	7.83205	5.04577	8.30417	6.04843	9.94973	10.5034	10.4747	9.2006	9.24129	26.2317	26.095	242.82	140.302	50.5111	49.6369	13.2853	12.5608
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000435Tektin
Blast
[Close]
BLAST of TCONS_00069374 vs. Swiss-Prot (Human)
Match: TEKT1 (Tektin-1 OS=Homo sapiens GN=TEKT1 PE=1 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 8.652e-100
Identity = 154/329 (46.81%), Postives = 230/329 (69.91%), Query Frame = 2 
Query:   11 DISFWKSELDRQYKETEDEIKRMIEYKNRLEVALNATEIPLHIAKECLQNRQKRMSIDLVHDDVEVQLLKEVEIIEGVQAMLRRTLDQATEQIRLLRSANHYLGKDIGDKFSALGIDDHCAGLGNDSPQKYFAPGAVKVQANSITTEEWEKFSNKNVLKAERERNSAVTIESMIEEILQETFEDQQKQCDNVNLAFEKRIEETSKAKAKLEDHLVKVNQEITDMESNIDMLNQAINGKLSPMQVSQTRLDTRAHRPNAELCRDQVQYKLISEVGEISENIERLQQALRESEDNLKGLSRQQLRLEEDIEIKANTLFIDRDQNMTIRKQI 997
            ++ FWK ELD + ++  +    ++ YK RLE AL   + PLHI + CL  R+KR+ IDLVHD VE +L+KE EII+G+ A+L RTL++A+EQIR+ RSA + L KD+ DKF AL IDD C  L N+SP   ++  AV+++ NS++ E+W  FS+ NV KA+++RN+++ ++++++ IL +T  D +KQCD V+ AF+  +++T  A+ KL DHL KV +EI   E NI  L +AI  +  P +V+ TRL+TR HRPN ELCRD  QY+L+ EV EI+ N+ RL++ L +++  LKGL R+QL L+E+I++K NT++ID    M +RK I
Sbjct:   69 EVQFWKKELDDKLEQLVNVTDDLLIYKIRLEKALETLKEPLHITETCLAYREKRIGIDLVHDTVEHELIKEAEIIQGIMALLTRTLEEASEQIRMNRSAKYNLEKDLKDKFVALTIDDICFSLNNNSPNIRYSENAVRIEPNSVSLEDWLDFSSTNVEKADKQRNNSLMLKALVDRILSQTANDLRKQCDVVDTAFKNGLKDTKDARDKLADHLAKVMEEIASQEKNITALEKAILDQEGPAKVAHTRLETRTHRPNVELCRDVAQYRLMKEVQEITHNVARLKETLAQAQAELKGLHRRQLALQEEIQVKENTIYIDEVLCMQMRKSI 397
The following BLAST results are available for this feature:
BLAST of TCONS_00069374 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TEKT18.652e-10046.81Tektin-1 OS=Homo sapiens GN=TEKT1 PE=1 SV=1[more]
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