TCONS_00069336 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069336
Unique NameTCONS_00069336
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1610

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069336 ID=TCONS_00069336|Name=TCONS_00069336|organism=Clytia hemisphaerica|type=transcript|length=1610bp
TTATCAAACTATAAAAAAGCTCAACCATAAATTACCACCCACCATGTCAA
TATACCGCAATGTGATCTGGTTCACCAAAGGCATTCGTGAATATTGTAAA
TCTGGATATGAACATGCTGCCAAGACTTTCGAATCTTTAGAAGGCGTTCG
ATTGGAAGGACGATCTTATATGATCACTGGTGCTAATAGTGGAATCGGTA
AAGAGGCAGCATTGAAGATTGCCAGTATGGGAGGAATAGTTCATTTGGTT
TGTCGAAATGAACAACGTGGTCAAGAAGCactgaaagaaataaaaacaca
aTCTGGTAGTGAAGAAGTGCATCTTCATCTACTTGATATGTCTCAATCAA
GAGAAGTCCATAAATTCACCAAAGATTTCACTGAATCTGGTCGTCCTTTG
AATGTACTCATAAACAACGCAGGTTGTATGGTTAATACAAGAGAATTGAA
CGAAGAAGGAGTTGAGAAGAATTTTGCTACCAATACACTTGGCACCTACC
TCCTAACTACAGGCTTGATTAATCATCTACAGAACTCAGAATCTCCTCAA
GTTATCACAGTCTCGTCAGGTGGTATGTTAGTAAACAAACTGGATTCTAG
TGATTTCAACTTCGAACAAATGAACCCTTTCGATGGCACAATGGCTTATT
CTCAAAACAAACGGCAACAAATTGAAATGACTGATTATTGGGCCGTGCAA
TATCCAAACATACAATTTACAACCATGCATCCAGGTTGGGCCGACACTCC
TGCTGTTCGCAATTCCATGCCAGATTTTtacgaaaaaatgaaaaatagac
tTCGGACAACGGAACAAGGTGCGGACACAATTGTTTGGCTTGCCACTTCA
TCAACCGCCCGTAAAGCGCCCTCGGGTGGATTTTATCAAGACAGAACACC
AGTTTCTAAACATTTACCGTTAGCTTGGACTAAATCATCAGAAAAAGAGA
GGAGGGTTTTTACGGAAAAATTAGAGACATTGGCTTCAAAATTTAGGTCA
TAGTTAAAAAGACTGATCGTGATATTATCAAAGTCAGATAAAATGTAGCC
TAGGGTCAACTCTTGAAGCTTTCTATAGACTTTATGACACTTGAGTTGCC
TGATACATGGTAATTCtccaatacacgggttgcaaaattatatcaatgca
gtcaaaatatgtgattactcaaaaatattCGCGTGATTTTATTCGCATGC
TTTTACCACTTTAAGCTGATAGCTTTATAAGTGTTACCACTTAAAGCTGA
TAGCTTTAtaagtgtcaataaattcgaaccaatcagaaataaatgtcatg
taaaaagcacataaaaaagaacaaagcgtgatttgtcttcagactttaat
ttagCAACCAATGTATTTAGagttttgcttaggcggactgtaagaCAGTT
TTTTGTCtcctaaaatatttcaaattgctCGGTTATTGGCTTATGTTTAT
TTAGGCTAATATTTAATATAATCAATATAACAGAAACCTTAggatgaaaa
taaaatagtagCCTCCAAagtatatgaaatattttacgatGACAAACTAT
ATATTATAGATATTAAATTTCATTGATTAATGCcattgaattttgacttt
tagAATAATT
Run BLAST on NCBI

protein sequence of TCONS_00069336-protein

>TCONS_00069336-protein ID=TCONS_00069336-protein|Name=TCONS_00069336-protein|organism=Clytia hemisphaerica|type=polypeptide|length=333bp
YQTIKKLNHKLPPTMSIYRNVIWFTKGIREYCKSGYEHAAKTFESLEGVR
LEGRSYMITGANSGIGKEAALKIASMGGIVHLVCRNEQRGQEALKEIKTQ
SGSEEVHLHLLDMSQSREVHKFTKDFTESGRPLNVLINNAGCMVNTRELN
EEGVEKNFATNTLGTYLLTTGLINHLQNSESPQVITVSSGGMLVNKLDSS
DFNFEQMNPFDGTMAYSQNKRQQIEMTDYWAVQYPNIQFTTMHPGWADTP
AVRNSMPDFYEKMKNRLRTTEQGADTIVWLATSSTARKAPSGGFYQDRTP
VSKHLPLAWTKSSEKERRVFTEKLETLASKFRS
Run BLAST on NCBI

transcript from alignment at scaffold_498:244417..249306+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069336 ID=TCONS_00069336|Name=TCONS_00069336|organism=Clytia hemisphaerica|type=transcript|length=4890bp|location=Sequence derived from alignment at scaffold_498:244417..249306+ (Clytia hemisphaerica)
TTATCAAACTATAAAAAAGCTCAACCATAAATTACCACCCACCATGTCAA
TATACCGCAATGTGATCTGGTTCACCAAAGGCATTCGTGAATATTGTAAA
TCTGGATATGAACATGCTGCCAAGACTTTCGAATCTTTAGAAGGCGTTCG
ATTGGAAGGACGATCTTATATGATCACTGGTGCTAATAGTGGAATCGGTA
TGAATGTTATTCATGATATCCATGACGTAttgttttatacggaaacatCC
GAAAAAGACCGGGTATTGCCACTAATTAGTTATTTAAACCATAAAACTTG
TGGCAAACTCCTGGTCTTTTTAGGTGCTTTCGTATAAGatattacgtcat
gaatgtCACGAATTGTATCTTTGATGCCAGGTCAGCTCAAAAATTGGACA
CAATTTTGTCACCCAGGCTACTAGCTATTAAACTCTTCCCTTTCGAACTC
ACAGACATGACATTTTCAGGATTATTATCTATTAGCAGGATTAAAATTTG
ACGGTATCTCGATAATGCTCGATAATCAGGTTCCTTAAACCAGTTTCAAA
GCTTCAACTAAGGATTCATCAGGATTCATAAGAGGTTTCTATTCAAACCA
CTCAAttcgtgatatgcaccattgtaatATCTNGATTCATCAGGATTCAT
AAGAGGTTTCTATTCAAttcgtgatatgcaccattgtaatATCTTccgac
attacatcacggacccgacagctgattggttgcaagtgacgtaaaatcag
tcaatacgtcaatttcaaccaatcagctgttgggtttgTGGAAGATATTG
CAGCGGTGCATACCACAAATACACAAtgattaaaagtttttatttggttt
atttaGGTAAAGAGGCAGCATTGAAGATTGCCAGTATGGGAGGAATAGTT
CATTTGGTTTGTCGAAATGAACAACGTGGTCAAGAAGCactgaaagaaat
aaaaacacaaTCTGGTAAATTATATCATGCATGTTTCTTTTGTCCAATCA
ATTTTTTAGGCCCGGCcacatgatgacgtcatctggcaggtgccAGGTAA
CAACATtaggtgttactgtttaaaattcaGTTTTACCTACGAAGGACTAT
CTGTGTCAAATTTTGAGCTTTAATAGCTATCTGAAGTATAGTTACATTTT
ATATGCTAGCAAACAAACCTTATTTGGGAAAAACTCGGGGTTTTAATTTG
CAAAGGAAAAACTTTCGTCACCTAGAGACAATTTCGTTTCTACTTCTCGG
CCGAATTTCTCTAAAAATGCATCACTCTTTCCCCAGACGAAATtcacaat
ttagtcactttaaCCTGgctaaattgttcttaacattgtTTCCGTTGTTT
CCTTAGCAAGCCCGAAAATAAATCTCGTAATTCGACGTTTAGAGCAATAA
CTTCGGTTGATACAGACATGAAGAATTTAAAAGGGTAATCACAAAAAAAC
TCTCGCTACAAAATAGTATACCTTCTGTTCACGCTTTTATCTTAGTTTCT
CATTACTAGCtatttattactttatttttacCATATTCATTTATCCAGGT
AGTGAACAAGTGCATCTTCATCNtatttattactttatttttacCATATT
CATTTATCCAGGTAGTGAAGAAGTGCATCTTCATCTACTTGATATGTCTC
AATCAAGAGAAGTCCATAAATTCACCAAAGATTTCACTGAATCTGGTCGT
CCTTTGAATGTACTCATAAATAACGCAGGTTCgtatctacacgtttttta
taaaaacaaactatataagaacataacgtTTCGATGGcccaaaagttaag
aacaagttaaaaacattttaaggcttaatggactctaaaacacctgattt
gatacagtgccgtaggaagcagtTTCTTATTGGGGNtatttattacttta
tttttacCATATTCATTTATCCAGGTAGTGAAGAAGTGCATCTTCATCTA
CTTGATATGTCTCAATCAAGAGAAGTCCATAAATTCACCAAAGATTTCAC
TGAATCTGGTCGTCCTTTGAATGTACTCATAAACAACGCAGGTTAgtatc
tacacgttttttataagaacaaactatataagaacataacgtTTCGATGG
cccaaaagttaagaacaagttaaaaacattttaaggcttcgtggactcta
aaacacctgatttgttaagaaagtggacaaaaaatactcaaaaatgacGG
GATATTGAATATGGTCTACACATTATAAGTTAAGTacaatttaaggcttt
gtggactttaGAACACCGAATTTCATAGGCAAactgacaaaaatattcaa
aaaatggcgaaaataagaacatgctaaaaagcttaaggcttaaaactcaa
aaagttaagaacatccaaggcttcaaaatttttagatcttcttataaaag
aaatttcTATATTTATTTTACCAGGTTGTATGGTTAATACAAGAGAATTG
AACGAAGAAGGAGTTGAGAAGAATTTTGCTACCAATACACTTGGCACCTA
CCTCCTAACTACAGGCTTGATTAATCATCTACAGAACTCAGAATCTCCTC
AAGTTATCACAGTCTCGTCAGGTTGGTAAAGTTTATCTGACTTGTAAGAT
TTCTTGAAATAGTGAGAGCCACTATGTTCTAAGAACATCCTCCGTGTGAA
Cagacttgttaaaagcaaactaactttgttaaatgatcaattaggtccat
aagatcacaaaaacgagtggtaAGAAAAAtcttgaccattttgctggtcc
tcatgtgacgtcatcatttttgctggggcttgaaaatgaaagtgaaaatt
agaagctcataTATGGTTCAAATGAAAGATCAGTTTCCTAAACaagtctg
tgcacacgaagaacATTGTAGCTCTCACTAAAATATTTCCCGGGGGAGAA
GTTACTTGTCCTGAGGGTACTAGTGTTAGGGaatgacgggtatgtgcgga
cgggacttCCGAAAAACGACCCTtaagttttgtaaaaaaaagtgaTAGAG
ATAATTGTCGAAATATTTCCTAACCTAAGAAGAGACTTTACATGGCTTTT
GTAAAATTCCTTGAGCTAAAGCTaaaagaacaagctaagaacatttttac
gcTTTACACTCAATAGCATACCGAAGTGAATCTAAAAAAAggcattgatt
tttctgtttgaccgaaattcaatcccatcaccctttgcgttgattacact
caattacaaagaaaaagttataacttttacgacttttgaattaatacgaa
aaggattgtggtattaaatttcggtcaaatgagaaAAGTAATAATCATGA
CGTTTGCTTAACGAAGCGCTATTTCAAAGGAAATTGCACAaacattctca
caaaatggcaaaaataagaacgttttaagaacatttttaagcttaaaact
caaaagattttggatgttcttataaaaacctgTATTTTAACGTAAAAAAC
GATTGAAGTTTCTCGTTTTAAAGATTCTTCTTGTCTACCTTCATGCAGGT
GGTATGTTAGTAAACAAACTGGATTCTAGTGATTTCAACTTCGAACAAAT
GAACCCTTTCGATGGCACAATGGCTTATTCTCAAAACAAACGGCAACAAA
TTGAAATGACTGATTATTGGGCCGTGCAATATCCAAACATACAATTTACA
ACCATGCATCCAGGTACAAAACActtgtttttaatttaaattttgtttca
gGAATGTACCCTCTTAAAGGAAGAGATTTTGTCAGGAAAAAAGTAAGTTT
CAAATTTCCAGGGGATTTTTAAAAGAAGGGCGCTTTTTTCTCAAAGTAGA
AGGTTTGGATTGAATTATAATCAAAGAAAACTCTAGGTCTTTCTTCTAGG
AAAAGAAACGTATAATCTTTCTTACGGTAGAACCCTATTTCAACCTTCAC
CTAACGATAATCGGACAATAGATGGGCCTTTTTTGGACGTTATATGCCTG
CTGAAGAGCTTAAAGATGGAATAAAATAAGACACAAGAAGGCAAATCGCA
ATTCAATATTTTAGGTTGGGCCGACACTCCTGCTGTTCGCAATTCCATGC
CAGATTTTtacgaaaaaatgaaaaatagactTCGGACAACGGAACAAGGT
GCGGACACAATTGTTTGGCTTGCCACTTCATCAACCGCCCGTAAAGCGCC
CTCGGGTGGATTTTATCAAGACAGAACACCAGTTTCTAAACATTTACCGT
TAGCTTGGACTAAATCATCAGAAAAAGAGAGGAGGGTTTTTACGGAAAAA
TTAGAGACATTGGCTTCAAAATTTAGGTCATAGTTAAAAAGACTGATCGT
GATATTATCAAAGTCAGATAAAATGTAGCCTAGGGTCAACTCTTGAAGCT
TTCTATAGACTTTATGACACTTGAGTTGCCTGATACATGGTAATTCtcca
atacacgggttgcaaaattatatcaatgcagtcaaaatatgtgattactc
aaaaatattCGCGTGATTTTATTCGCATGCTTTTACCACTTTAAGCTGAT
AGCTTTATAAGTGTTACCACTTAAAGCTGATAGCTTTAtaagtgtcaata
aattcgaaccaatcagaaataaatgtcatgtaaaaagcacataaaaaaga
acaaagcgtgatttgtcttcagactttaatttagCAACCAATGTATTTAG
agttttgcttaggcggactgtaagaCAGTTTTTTGTCtcctaaaatattt
caaattgctCGGTTATTGGCTTATGTTTATTTAGGCTAATATTTAATATA
ATCAATATAACAGAAACCTTAggatgaaaataaaatagtagCCTCCAAag
tatatgaaatattttacgatGACAAACTATATATTATAGATATTAAATTT
CATTGATTAATGCcattgaattttgacttttagAATAATT

Coding sequence (CDS) from alignment at scaffold_498:244417..249306+

>TCONS_00069336 ID=TCONS_00069336|Name=TCONS_00069336|organism=Clytia hemisphaerica|type=CDS|length=6012bp|location=Sequence derived from alignment at scaffold_498:244417..249306+ (Clytia hemisphaerica)
TATCAAACTATAAAAAAGCTCAACCATAAATTACCACCCACCATGTCAAT
ATACCGCAATGTGATCTGGTTCACCAAAGGCATTCGTGAATATTGTAAAT
CTGGATATGAACATGCTGCCAAGACTTTCGAATCTTTAGAAGGCGTTCGA
TTGGAAGGACGATCTTATATGATCACTGGTGCTAATAGTGGAATCGGTAA
AGAGGCAGCATTGAAGATTGCCAGTATGGGAGGAATAGTTCATTTGGTTT
GTCGAAATGAACAACGTGGTCAAGAAGCactgaaagaaataaaaacacaa
TCTGGTAGTGAAGAAGTGCATCTTCATCTACTTGATATGTCTCAATCAAG
AGAAGTCCATAAATTCACCAAAGATTTCACTGAATCTGGTCGTCCTTTGA
ATGTACTCATAAACAACGCAGGTTGTATGGTTAATACAAGAGAATTGAAC
GAAGAAGGAGTTGAGAAGAATTTTGCTACCAATACACTTGGCACCTACCT
CCTAACTACAGGCTTGATTAATCATCTACAGAACTCAGAATCTCCTCAAG
TTATCACAGTCTCGTCAGGTGGTATGTTAGTAAACAAACTGGATTCTAGT
GATTTCAACTTCGAACAAATGAACCCTTTCGATGGCACAATGGCTTATTC
TCAAAACAAACGGCAACAAATTGAAATGACTGATTATTGGGCCGTGCAAT
ATCCAAACATACAATTTACAACCATGCATCCAGGTTGGGCCGACACTCCT
GCTGTTCGCAATTCCATGCCAGATTTTtacgaaaaaatgaaaaatagact
TCGGACAACGGAACAAGGTGCGGACACAATTGTTTGGCTTGCCACTTCAT
CAACCGCCCGTAAAGCGCCCTCGGGTGGATTTTATCAAGACAGAACACCA
GTTTCTAAACATTTACCGTTAGCTTGGACTAAATCATCAGAAAAAGAGAG
GAGGGTTTTTACGGAAAAATTAGAGACATTGGCTTCAAAATTTAGGTCAT
AGTATCAAACTATAAAAAAGCTCAACCATAAATTACCACCCACCATGTCA
ATATACCGCAATGTGATCTGGTTCACCAAAGGCATTCGTGAATATTGTAA
ATCTGGATATGAACATGCTGCCAAGACTTTCGAATCTTTAGAAGGCGTTC
GATTGGAAGGACGATCTTATATGATCACTGGTGCTAATAGTGGAATCGGT
AAAGAGGCAGCATTGAAGATTGCCAGTATGGGAGGAATAGTTCATTTGGT
TTGTCGAAATGAACAACGTGGTCAAGAAGCactgaaagaaataaaaacac
aaTCTGGTAGTGAAGAAGTGCATCTTCATCTACTTGATATGTCTCAATCA
AGAGAAGTCCATAAATTCACCAAAGATTTCACTGAATCTGGTCGTCCTTT
GAATGTACTCATAAACAACGCAGGTTGTATGGTTAATACAAGAGAATTGA
ACGAAGAAGGAGTTGAGAAGAATTTTGCTACCAATACACTTGGCACCTAC
CTCCTAACTACAGGCTTGATTAATCATCTACAGAACTCAGAATCTCCTCA
AGTTATCACAGTCTCGTCAGGTGGTATGTTAGTAAACAAACTGGATTCTA
GTGATTTCAACTTCGAACAAATGAACCCTTTCGATGGCACAATGGCTTAT
TCTCAAAACAAACGGCAACAAATTGAAATGACTGATTATTGGGCCGTGCA
ATATCCAAACATACAATTTACAACCATGCATCCAGGTTGGGCCGACACTC
CTGCTGTTCGCAATTCCATGCCAGATTTTtacgaaaaaatgaaaaataga
ctTCGGACAACGGAACAAGGTGCGGACACAATTGTTTGGCTTGCCACTTC
ATCAACCGCCCGTAAAGCGCCCTCGGGTGGATTTTATCAAGACAGAACAC
CAGTTTCTAAACATTTACCGTTAGCTTGGACTAAATCATCAGAAAAAGAG
AGGAGGGTTTTTACGGAAAAATTAGAGACATTGGCTTCAAAATTTAGGTC
ATAGTATCAAACTATAAAAAAGCTCAACCATAAATTACCACCCACCATGT
CAATATACCGCAATGTGATCTGGTTCACCAAAGGCATTCGTGAATATTGT
AAATCTGGATATGAACATGCTGCCAAGACTTTCGAATCTTTAGAAGGCGT
TCGATTGGAAGGACGATCTTATATGATCACTGGTGCTAATAGTGGAATCG
GTAAAGAGGCAGCATTGAAGATTGCCAGTATGGGAGGAATAGTTCATTTG
GTTTGTCGAAATGAACAACGTGGTCAAGAAGCactgaaagaaataaaaac
acaaTCTGGTAGTGAAGAAGTGCATCTTCATCTACTTGATATGTCTCAAT
CAAGAGAAGTCCATAAATTCACCAAAGATTTCACTGAATCTGGTCGTCCT
TTGAATGTACTCATAAACAACGCAGGTTGTATGGTTAATACAAGAGAATT
GAACGAAGAAGGAGTTGAGAAGAATTTTGCTACCAATACACTTGGCACCT
ACCTCCTAACTACAGGCTTGATTAATCATCTACAGAACTCAGAATCTCCT
CAAGTTATCACAGTCTCGTCAGGTGGTATGTTAGTAAACAAACTGGATTC
TAGTGATTTCAACTTCGAACAAATGAACCCTTTCGATGGCACAATGGCTT
ATTCTCAAAACAAACGGCAACAAATTGAAATGACTGATTATTGGGCCGTG
CAATATCCAAACATACAATTTACAACCATGCATCCAGGTTGGGCCGACAC
TCCTGCTGTTCGCAATTCCATGCCAGATTTTtacgaaaaaatgaaaaata
gactTCGGACAACGGAACAAGGTGCGGACACAATTGTTTGGCTTGCCACT
TCATCAACCGCCCGTAAAGCGCCCTCGGGTGGATTTTATCAAGACAGAAC
ACCAGTTTCTAAACATTTACCGTTAGCTTGGACTAAATCATCAGAAAAAG
AGAGGAGGGTTTTTACGGAAAAATTAGAGACATTGGCTTCAAAATTTAGG
TCATAGTATCAAACTATAAAAAAGCTCAACCATAAATTACCACCCACCAT
GTCAATATACCGCAATGTGATCTGGTTCACCAAAGGCATTCGTGAATATT
GTAAATCTGGATATGAACATGCTGCCAAGACTTTCGAATCTTTAGAAGGC
GTTCGATTGGAAGGACGATCTTATATGATCACTGGTGCTAATAGTGGAAT
CGGTAAAGAGGCAGCATTGAAGATTGCCAGTATGGGAGGAATAGTTCATT
TGGTTTGTCGAAATGAACAACGTGGTCAAGAAGCactgaaagaaataaaa
acacaaTCTGGTAGTGAAGAAGTGCATCTTCATCTACTTGATATGTCTCA
ATCAAGAGAAGTCCATAAATTCACCAAAGATTTCACTGAATCTGGTCGTC
CTTTGAATGTACTCATAAACAACGCAGGTTGTATGGTTAATACAAGAGAA
TTGAACGAAGAAGGAGTTGAGAAGAATTTTGCTACCAATACACTTGGCAC
CTACCTCCTAACTACAGGCTTGATTAATCATCTACAGAACTCAGAATCTC
CTCAAGTTATCACAGTCTCGTCAGGTGGTATGTTAGTAAACAAACTGGAT
TCTAGTGATTTCAACTTCGAACAAATGAACCCTTTCGATGGCACAATGGC
TTATTCTCAAAACAAACGGCAACAAATTGAAATGACTGATTATTGGGCCG
TGCAATATCCAAACATACAATTTACAACCATGCATCCAGGTTGGGCCGAC
ACTCCTGCTGTTCGCAATTCCATGCCAGATTTTtacgaaaaaatgaaaaa
tagactTCGGACAACGGAACAAGGTGCGGACACAATTGTTTGGCTTGCCA
CTTCATCAACCGCCCGTAAAGCGCCCTCGGGTGGATTTTATCAAGACAGA
ACACCAGTTTCTAAACATTTACCGTTAGCTTGGACTAAATCATCAGAAAA
AGAGAGGAGGGTTTTTACGGAAAAATTAGAGACATTGGCTTCAAAATTTA
GGTCATAGTATCAAACTATAAAAAAGCTCAACCATAAATTACCACCCACC
ATGTCAATATACCGCAATGTGATCTGGTTCACCAAAGGCATTCGTGAATA
TTGTAAATCTGGATATGAACATGCTGCCAAGACTTTCGAATCTTTAGAAG
GCGTTCGATTGGAAGGACGATCTTATATGATCACTGGTGCTAATAGTGGA
ATCGGTAAAGAGGCAGCATTGAAGATTGCCAGTATGGGAGGAATAGTTCA
TTTGGTTTGTCGAAATGAACAACGTGGTCAAGAAGCactgaaagaaataa
aaacacaaTCTGGTAGTGAAGAAGTGCATCTTCATCTACTTGATATGTCT
CAATCAAGAGAAGTCCATAAATTCACCAAAGATTTCACTGAATCTGGTCG
TCCTTTGAATGTACTCATAAACAACGCAGGTTGTATGGTTAATACAAGAG
AATTGAACGAAGAAGGAGTTGAGAAGAATTTTGCTACCAATACACTTGGC
ACCTACCTCCTAACTACAGGCTTGATTAATCATCTACAGAACTCAGAATC
TCCTCAAGTTATCACAGTCTCGTCAGGTGGTATGTTAGTAAACAAACTGG
ATTCTAGTGATTTCAACTTCGAACAAATGAACCCTTTCGATGGCACAATG
GCTTATTCTCAAAACAAACGGCAACAAATTGAAATGACTGATTATTGGGC
CGTGCAATATCCAAACATACAATTTACAACCATGCATCCAGGTTGGGCCG
ACACTCCTGCTGTTCGCAATTCCATGCCAGATTTTtacgaaaaaatgaaa
aatagactTCGGACAACGGAACAAGGTGCGGACACAATTGTTTGGCTTGC
CACTTCATCAACCGCCCGTAAAGCGCCCTCGGGTGGATTTTATCAAGACA
GAACACCAGTTTCTAAACATTTACCGTTAGCTTGGACTAAATCATCAGAA
AAAGAGAGGAGGGTTTTTACGGAAAAATTAGAGACATTGGCTTCAAAATT
TAGGTCATAGTATCAAACTATAAAAAAGCTCAACCATAAATTACCACCCA
CCATGTCAATATACCGCAATGTGATCTGGTTCACCAAAGGCATTCGTGAA
TATTGTAAATCTGGATATGAACATGCTGCCAAGACTTTCGAATCTTTAGA
AGGCGTTCGATTGGAAGGACGATCTTATATGATCACTGGTGCTAATAGTG
GAATCGGTAAAGAGGCAGCATTGAAGATTGCCAGTATGGGAGGAATAGTT
CATTTGGTTTGTCGAAATGAACAACGTGGTCAAGAAGCactgaaagaaat
aaaaacacaaTCTGGTAGTGAAGAAGTGCATCTTCATCTACTTGATATGT
CTCAATCAAGAGAAGTCCATAAATTCACCAAAGATTTCACTGAATCTGGT
CGTCCTTTGAATGTACTCATAAACAACGCAGGTTGTATGGTTAATACAAG
AGAATTGAACGAAGAAGGAGTTGAGAAGAATTTTGCTACCAATACACTTG
GCACCTACCTCCTAACTACAGGCTTGATTAATCATCTACAGAACTCAGAA
TCTCCTCAAGTTATCACAGTCTCGTCAGGTGGTATGTTAGTAAACAAACT
GGATTCTAGTGATTTCAACTTCGAACAAATGAACCCTTTCGATGGCACAA
TGGCTTATTCTCAAAACAAACGGCAACAAATTGAAATGACTGATTATTGG
GCCGTGCAATATCCAAACATACAATTTACAACCATGCATCCAGGTTGGGC
CGACACTCCTGCTGTTCGCAATTCCATGCCAGATTTTtacgaaaaaatga
aaaatagactTCGGACAACGGAACAAGGTGCGGACACAATTGTTTGGCTT
GCCACTTCATCAACCGCCCGTAAAGCGCCCTCGGGTGGATTTTATCAAGA
CAGAACACCAGTTTCTAAACATTTACCGTTAGCTTGGACTAAATCATCAG
AAAAAGAGAGGAGGGTTTTTACGGAAAAATTAGAGACATTGGCTTCAAAA
TTTAGGTCATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043210XLOC_043210Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069336-proteinTCONS_00069336-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069336-exon-scaffold_498-1491911889:244417..244613TCONS_00069336-exon-scaffold_498-1491911889:244417..244613Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1510915933:244417..244613TCONS_00069336-exon-scaffold_498-1510915933:244417..244613Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1575043694:244417..244613TCONS_00069336-exon-scaffold_498-1575043694:244417..244613Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1491911889:245273..245380TCONS_00069336-exon-scaffold_498-1491911889:245273..245380Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1510915933:245273..245380TCONS_00069336-exon-scaffold_498-1510915933:245273..245380Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1575043694:245273..245380TCONS_00069336-exon-scaffold_498-1575043694:245273..245380Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1491911889:246341..246457TCONS_00069336-exon-scaffold_498-1491911889:246341..246457Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1510915933:246341..246457TCONS_00069336-exon-scaffold_498-1510915933:246341..246457Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1575043694:246341..246457TCONS_00069336-exon-scaffold_498-1575043694:246341..246457Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1491911889:246841..246987TCONS_00069336-exon-scaffold_498-1491911889:246841..246987Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1510915933:246841..246987TCONS_00069336-exon-scaffold_498-1510915933:246841..246987Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1575043694:246841..246987TCONS_00069336-exon-scaffold_498-1575043694:246841..246987Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1491911889:247915..248079TCONS_00069336-exon-scaffold_498-1491911889:247915..248079Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1510915933:247915..248079TCONS_00069336-exon-scaffold_498-1510915933:247915..248079Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1575043694:247915..248079TCONS_00069336-exon-scaffold_498-1575043694:247915..248079Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1491911889:248431..249306TCONS_00069336-exon-scaffold_498-1491911889:248431..249306Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1510915933:248431..249306TCONS_00069336-exon-scaffold_498-1510915933:248431..249306Clytia hemisphaericaexon
TCONS_00069336-exon-scaffold_498-1575043694:248431..249306TCONS_00069336-exon-scaffold_498-1575043694:248431..249306Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_498supercontigscaffold_498:244417..249306 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.755835	1.41889	2.24131	4.99256	3.92545	5.13585	6.49914	4.73582	6.16575	0	0	0	0	0	0	0	0	0	0	18.5193	15.624	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
Blast
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BLAST of TCONS_00069336 vs. Swiss-Prot (Human)
Match: DHR12 (Dehydrogenase/reductase SDR family member 12 OS=Homo sapiens GN=DHRS12 PE=2 SV=2)

HSP 1 Score: 329.717 bits (844), Expect = 3.531e-108
Identity = 178/320 (55.62%), Postives = 232/320 (72.50%), Query Frame = 2 
Query:   44 MSIYRNVIWFTKGIREYCKSGYEHAAKTF--ESLEGVRLEGRSYMITGANSGIGKEAALKIASMGGIVHLVCRNEQRGQEALKEIKTQSGSEEVHLHLLDMSQSREVHKFTKDFTESGRPLNVLINNAGCMVNTRELNEEGVEKNFATNXXXXXXXXXXXINHLQNSESPQVITVSSGGMLVNKLDSSDFNFEQMNPFDGTMAYSQNKRQQIEMTDYWAVQYPNIQFTTMHPGWADTPAVRNSMPDFYEKMKNRLRTTEQGADTIVWLATSSTARKAPSGGFYQDRTPVSKHLPLAWTKSSEKERRVFTEKLETLASKFR 997
            MS+YR+V+WF KG+REY KSGYE A K F    LE V++ GR +++TG NSGIGK  AL+IA  GG VHLVCR++   ++A  EI  +SG++ + LH++D+S  +++ KF ++F +  + L+VLINNAGCMVN REL E+G+EKNFA NTLG Y+LTTGLI  L+    P+VITVSSGGMLV KL+++D   E+  PFDGTM Y+QNKRQQ+ +T+ WA  +P I F++MHPGWADTP VR +MP F+ +  +RLR+  QGADT++WLA SS A   PSG F+QDR PVS HLPLA   SS  E     E LE LA  F+
Sbjct:    1 MSLYRSVVWFAKGLREYTKSGYESACKDFVPHDLE-VQIPGRVFLVTGGNSGIGKATALEIAKRGGTVHLVCRDQAPAEDARGEIIRESGNQNIFLHIVDLSDPKQIWKFVENFKQEHK-LHVLINNAGCMVNKRELTEDGLEKNFAANTLGVYILTTGLIPVLEKEHDPRVITVSSGGMLVQKLNTNDLQSER-TPFDGTMVYAQNKRQQVVLTERWAQGHPAIHFSSMHPGWADTPGVRQAMPGFHARFGDRLRSEAQGADTMLWLALSSAAAAQPSGRFFQDRKPVSTHLPLATASSSPAEEEKLIEILEQLAQTFK 317
The following BLAST results are available for this feature:
BLAST of TCONS_00069336 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHR123.531e-10855.63Dehydrogenase/reductase SDR family member 12 OS=Ho... [more]
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