|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069293 ID=TCONS_00069293|Name=TCONS_00069293|organism=Clytia hemisphaerica|type=transcript|length=929bp
ATGATGAAAAGCAACAagggttttttcaataaatattttcgatatttaca
ttttaaaaacaaaatataaactaACAAAACCATGGCAATACTCAGGTAAA
ATAATATGtggtttgctttttttttaaacactcGTTTAAGTACGAGGCTC
GGATAATATGACGTAAAATctgaactgaaaaaaaatctgatttaATTAAT
CAAATTTAATCTCATATTAAATTATCTCAAATTTTCTCAAGGTACTCGGT
ACCATGCGTATCTTAAGAGCAACAAAATGGCTTTATTGatttgaaatatt
aaaaaaagagagaaaaagaccAACGAAAGCAAGGCCAAAATTTATTGATC
CCTAAAAGCGTTATCTCCCATCACCCATGAAGGCATCGCCTTAGTTTCGA
TTATCATTCTTCTCAAGCAATGATTTCTAgaacacattttgaaaaaagta
tgctttgaatttgaaattaccgtgtgtcactaggttgtgtctaaaatata
acataaatcaaatcaaaaactatAAAATGTATATTTCAAACTTACTAAGA
GTCAAAAAAATGTCCTGATATGTTAACTTTTAAAgttttctaaattattt
tcGAATATCTATGTGTAAATtcctaaaaaaaactttaattacCTTCAAAA
ACGATTCCAAATATGAAATGTATAAACTGTCCATTATATATATACCAACG
AAAAACTAAGCAAAACCACTATACAAAACATGGATCAAAATCATACCTAA
CTTTTCTCCTGGCAGCACGAGCTAGAGATTATTTTCCATGTTTGACTTTT
AACTTGCATTTACAGACTTGTTCATATCATGCTCAACGGTTTTTCTTGTG
Ntcttattttgaccattttgtgaattttttttaccattttcctaagaaat
agggtgtttttgagtccacaaagccttaa Run BLAST on NCBI transcript from alignment at scaffold_496:254532..255460 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069293 ID=TCONS_00069293|Name=TCONS_00069293|organism=Clytia hemisphaerica|type=transcript|length=929bp|location=Sequence derived from alignment at scaffold_496:254532..255460 (Clytia hemisphaerica)
ttaaggctttgtggactcaaaaacaccctatttcttaggaaaatggtaaa
aaaaattcacaaaatggtcaaaataagaNCACAAGAAAAACCGTTGAGCA
TGATATGAACAAGTCTGTAAATGCAAGTTAAAAGTCAAACATGGAAAATA
ATCTCTAGCTCGTGCTGCCAGGAGAAAAGTTAGGTATGATTTTGATCCAT
GTTTTGTATAGTGGTTTTGCTTAGTTTTTCGTTGGTATATATATAATGGA
CAGTTTATACATTTCATATTTGGAATCGTTTTTGAAGgtaattaaagttt
tttttaggaATTTACACATAGATATTCgaaaataatttagaaaacTTTAA
AAGTTAACATATCAGGACATTTTTTTGACTCTTAGTAAGTTTGAAATATA
CATTTTatagtttttgatttgatttatgttatattttagacacaacctag
tgacacacggtaatttcaaattcaaagcatacttttttcaaaatgtgttc
TAGAAATCATTGCTTGAGAAGAATGATAATCGAAACTAAGGCGATGCCTT
CATGGGTGATGGGAGATAACGCTTTTAGGGATCAATAAATTTTGGCCTTG
CTTTCGTTggtctttttctctctttttttaatatttcaaatCAATAAAGC
CATTTTGTTGCTCTTAAGATACGCATGGTACCGAGTACCTTGAGAAAATT
TGAGATAATTTAATATGAGATTAAATTTGATTAATtaaatcagatttttt
ttcagttcagATTTTACGTCATATTATCCGAGCCTCGTACTTAAACgagt
gtttaaaaaaaaagcaaaccaCATATTATTTTACCTGAGTATTGCCATGG
TTTTGTtagtttatattttgtttttaaaatgtaaatatcgaaaatattta
ttgaaaaaaccctTGTTGCTTTTCATCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069293-exon-scaffold_496-1491911889:254532..255460 | TCONS_00069293-exon-scaffold_496-1491911889:254532..255460 | Clytia hemisphaerica | exon |
| TCONS_00069293-exon-scaffold_496-1510915933:254532..255460 | TCONS_00069293-exon-scaffold_496-1510915933:254532..255460 | Clytia hemisphaerica | exon |
| TCONS_00069293-exon-scaffold_496-1575043694:254532..255460 | TCONS_00069293-exon-scaffold_496-1575043694:254532..255460 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_496 | supercontig | scaffold_496:254532..255460 . |
Blast
The following BLAST results are available for this feature:
|
