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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069221 ID=TCONS_00069221|Name=TCONS_00069221|organism=Clytia hemisphaerica|type=transcript|length=200bp
GGAATCTAATGAAAATAACAAAGAAGAGGATTTTGCTAATTTCAAGATAA
CATATTCCGATAGCAGTGATAGCGATGGAATCAACGAGGGACTCAACTCT
CTAGAAGACACGTTCCGCGAAGACGAGGTATTCAATATAATACTTTTTAA
ATATTCCCTCTATCAAGGAAATATTTATTACAATGACGCGTTTCCTTTTT Run BLAST on NCBI transcript from alignment at scaffold_496:12643..15350- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069221 ID=TCONS_00069221|Name=TCONS_00069221|organism=Clytia hemisphaerica|type=transcript|length=2708bp|location=Sequence derived from alignment at scaffold_496:12643..15350- (Clytia hemisphaerica)
GGAATCTAATGAAAATAACAAAGAAGAGGATTTTGCTAATTTCAAGGTAA
AACCTCGTTGACGTCTTCAATAGCAAGATTTTACTTATAATATTATATGT
AGTTGTATACTTCAACCTATTTTTGAAATCTTTCGGCCTGGAGTGTTATT
ACTTTAAACGTACTAATTTTCCCGCAATTTCGCGCAGATGCCCAAAAATG
CGCGAAATTTTATACCAAAGTTATTAATTTAACGTATTAAGGCTCTTGGA
ACTAAGTAACACAAACGCAAAACTTGGTTCTGTCAAGCTTGATTCTCTAC
TGTAAAAAAAATNGCGTTGACTGTATAACATCTATCTAGAAAAAAGGAAA
ATAATTTCGTGCAAAAATACAATATATTTTTCCGAAATCCGTATTGCTAA
AACTATGAATACGANGGTGTTCAAGATAACGAGCGTTGACTGTATAACAT
CTATCTAGAAAAAAGGAAAATAATTTCGTGCAAAAATACAATATATTTTT
CCGAAATCCGTATTGCTAAAACTATGAATACGATCCTCGGTCGCTTTAGG
CTCCCTCCGGTGGCAACCAATCTACATTTTTACATTTTTATATTTCTATA
TAGAGCAACCTGATTGATTTGGAACAATATGATTTGAAGAGCATTGATTG
GGATACTTGGAGTTGGTCAAGCCAGGTACTAAATTATATCTTTCCTATTC
TGTTGTGTAGTAGCAGTAGCAGTACAAATATTTATCTAGTTTCTTTTGTC
TTGTGGATTTTGTCTTGCTGTTTTCTATCAGGTCTAAATTATCGGAATTG
AATCTTAACAGATCTTAACAGATCGTAAACATTTTCTTGCCATGCACGCT
AGACGCGTAAATGCTATAAACTGCATCTTCTTTTTTTAAGTAATATTCAA
GAGATGCTAGAATGAACACTCAGAATTAAGGGCTTTTTACACCTTCCTAT
TATTAGTTAAACCGGAGTTAAACCCGTGGGAAAATGAAAGAATATTGTCC
AAAAATCTATAATTTTTCCCCTCAAAATTGGGTCCAAAATGTAAAAATAG
GTGAAATTAAGAAGATCAAAGAACCACTGAATATTCGTATTCACATCTTT
TATATCACAAAGTTACATCTGTATGAATGCAAATTCATACACATTTTAGC
AGTGGAAAGATTTCTCTTTTAATAGCACACCGTTATGCAAACGTCATAAT
TATTACTTTTAACATTTGACCGAAATTCAATCCCACAATCCTTTCTTCGT
TAATTCGTAATGCGTGCAAGTTATTACTTTCCCATTGTCAATAAGTGTAA
TTGACGTGCAAAAGCAATTAATGCAAAGGATGATGGGATAAAAACTCGGA
CAAACAGTAATTTTGATGTCTATTTTTAGAATCACGACGGTATGCTATTA
AAAAAAAACATTTTCCACCGGGAAAATAGGACTCTTCTACCTTTAAAAAC
GATTTTCATTTCGAGTCTCATTTTCCTTCGAACTAAAATTCCTTGGAAAC
TACGACTCGTGAATTCATAATATCCTGGAAAATCAGGACTTTAAAATCCT
AATCTCGTCCCAGTGCCTTAATTTACCCTACACTGGATCTTAATATCAGA
TAATTAAAAATGCAACGATATCTAAGAGGAGGACCTTTTGTGTTTCAGGA
ATCTAATGAAAATAACAAAGAAGAGGATTTTGCTAATTTCAAGGTAAAAC
CTCGTTGACGTCTTCAATAGCAAGATTTTACTTATAATATTATATGTAGT
TGTATACTTCAACCTATTTTTGAAATCTTTCGGCCTGGAGTGTTATTACT
TTAAACGTACTAATTTTCCCGCAATTTCGCGCAGATGCCCAAAAATGCGC
GAAATTTTATACCAAAGTTATTAATTTAACGTATTAAGGCTCTTGGAACT
AAGTAACACAAACGCAAAACTTGGTTCTGTCAAGCTTGATTCTATACTGT
AAAAAAAATGAAAATTAGCATGAAATTGCCTTTAACTGCAAGTGACAGAA
AAAAGTTTCTCTCGTTCTGAAAAATCAGGAGGTTTTCAAAAACTTAGTGT
TCAAAGAGCCTACTCAAATTGGGAATGTTCTTGAAATGCTTTTAAATTTT
TTATAAATACAGCCTCAATGTGTTTATAAAGTACTACAATGCTAGTCAAA
ATATATTGGGACTTTCGGGTGTTTCACCGTCAAGAATTAAAGTTCTGACG
AGAATGTTGATTTCGGGCTATCCGTTTAATTTAATCGAAAGTTTCAATTT
GGGAGGGATTTATTGACTTTCAGGCTATATTATCAGCCTTATTTGACCAT
TTTTAAACTTTTGGATGCACAGATCCTAAGGTTGTAAGTCTTTAGTCTAA
TGTTAAAACTCAGAGTTAAAACTCTACAAACCCTAAGTTAAAGCACTGTT
AAATCATTTGTAGTTTTAAAATTTCATGGGAATTCCCCCTTCGTCCCAAA
TGGCCAGTATGGTAGGCTCTAAATAAAAACGTGCTTTGGTTTTCAAAAAT
GATGGAAATTTGACGTGTTTTCTGGTATAATATATGCCACCTTATAAATT
TTAGATAACATATTCCGATAGCAGTGATAGCGATGGAATCAACGAGGGAC
TCAACTCTCTAGAAGACACGTTCCGCGAAGACGAGGTATTCAATATAATA
CTTTTTAAATATTCCCTCTATCAAGGAAATATTTATTACAATGACGCGTT
TCCTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069221-exon-scaffold_496-1575043694:15305..15350 | TCONS_00069221-exon-scaffold_496-1575043694:15305..15350 | Clytia hemisphaerica | exon |
| TCONS_00069221-exon-scaffold_496-1575043694:12643..12796 | TCONS_00069221-exon-scaffold_496-1575043694:12643..12796 | Clytia hemisphaerica | exon |
| TCONS_00069221-exon-scaffold_496-1510915933:15305..15350 | TCONS_00069221-exon-scaffold_496-1510915933:15305..15350 | Clytia hemisphaerica | exon |
| TCONS_00069221-exon-scaffold_496-1510915933:12643..12796 | TCONS_00069221-exon-scaffold_496-1510915933:12643..12796 | Clytia hemisphaerica | exon |
| TCONS_00069221-exon-scaffold_496-1491911889:15305..15350 | TCONS_00069221-exon-scaffold_496-1491911889:15305..15350 | Clytia hemisphaerica | exon |
| TCONS_00069221-exon-scaffold_496-1491911889:12643..12796 | TCONS_00069221-exon-scaffold_496-1491911889:12643..12796 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_496 | supercontig | scaffold_496:12643..15350 - |
Blast
The following BLAST results are available for this feature:
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