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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069104 ID=TCONS_00069104|Name=TCONS_00069104|organism=Clytia hemisphaerica|type=transcript|length=1438bp
aattttattttaattcttCTCTCATTTTGCGCATGATATTTCTCATcccc
tttttttttatattgaattctATCTTAGCCTTTTGctgattttgaaagtt
tttccttTATATCTTTCTGGGATTCCTCTTTCCCATACGGTACATAATCT
TTGGTGCCTCTATTTGTTTAATACTTCATTTCCATTAGATGCCTTCCCAA
AGCGTGTTTGTGTAATCTTGCTGGGCTACCATTTCAATGTGTGCTTACGT
TAAGCAAATACACCGTTATCTTTCTCATCAGGAACATATTCATCTGTGTA
TTGCTACTCGCCTTCCTTCGGCTATATTACTCATGATACGTACTCTATga
aattttatttctattcAGGCTTGCAAACTGAAGTCAACGTCCTCGATAAT
GGGCCCTTCGAGGATGAATTCTCAAAGATTGCGTGCTCTGACATTATGTA
TATATACTCTTATTCGCTGCGAATGATTCGCACATGCGATCGACTTTCAA
CCATGGTTTCTGCTGTCACTGCACAAGGCATCAGTACATATCCCCAAACC
ATGGAGTTTCGTTAACGCGTTATCGTTCCTGGAATATACTCAAAATTTCA
GTTCTTCAATTTTACGTTTCCATTTATATTTTCTATTCTTTACTTGTATT
GCGCCTTAAATCTTTAATCTCCAAATTGCTTTTACTGCACCACAATTCTT
AATGTTCGGACTAATGTTCGCGAACCACATCATGATTTTATTTACTCTTG
ATTCATATTTCACCATAAATATTTGTAAGTCACAACATTCATATTTTCTC
ATAAATACCCGCAAATCACAAAAATTCCTACACACGTACCTCTTGTAATt
gccattaaattctaattaactTCGTCGTAACTCTGACAAAGGGGAGCTTC
CGGGTGCTGACTTAGCTCAAAGGAGCCCGGGAACAGTTTAGTGTCTTACT
CAGGACTTACTGCTACTCATGAAAACTCATTCAATATCGATCTCTTTGTT
AAAGAACCTTCAGATTTTCTCATTTCTATTACATTCCCCAGAACAGCACA
ACGGTCTGAGACCCATTAggatctcggtagaacctccaAATGTCAGCCGA
GGGTTGACATTACTGTTCCGGGGATAAGAATTGATCGAGACTAATTTGAA
GTTACTTTTCTGGTATGCATTACCTGCATGTCTTTACTCCATAAAATACA
TATCAATTATCTATCTTGAAAGTTGCAGGCTCCTTATCAAATATCCTTCG
GCATGCTAGCCATACCGAAGGTGAGCAAAAATGAAATATGGCTGCCTGAC
AGGCTTGCATACCAGTAGTCGATGATGTTGCtgattctttcttcttcttc
ttttcttgtTTGTGATTTGCTTCttccaaaatcttttcaaaGTCTTCTTT
TAGACATTTGATGTTGTTTCTTGATAAAATCACCAATT Run BLAST on NCBI transcript from alignment at scaffold_493:10341..11778 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069104 ID=TCONS_00069104|Name=TCONS_00069104|organism=Clytia hemisphaerica|type=transcript|length=1438bp|location=Sequence derived from alignment at scaffold_493:10341..11778 (Clytia hemisphaerica)
AATTGGTGATTTTATCAAGAAACAACATCAAATGTCTAAAAGAAGACttt
gaaaagattttggaaGAAGCAAATCACAAacaagaaaagaagaagaagaa
agaatcaGCAACATCATCGACTACTGGTATGCAAGCCTGTCAGGCAGCCA
TATTTCATTTTTGCTCACCTTCGGTATGGCTAGCATGCCGAAGGATATTT
GATAAGGAGCCTGCAACTTTCAAGATAGATAATTGATATGTATTTTATGG
AGTAAAGACATGCAGGTAATGCATACCAGAAAAGTAACTTCAAATTAGTC
TCGATCAATTCTTATCCCCGGAACAGTAATGTCAACCCTCGGCTGACATT
tggaggttctaccgagatccTAATGGGTCTCAGACCGTTGTGCTGTTCTG
GGGAATGTAATAGAAATGAGAAAATCTGAAGGTTCTTTAACAAAGAGATC
GATATTGAATGAGTTTTCATGAGTAGCAGTAAGTCCTGAGTAAGACACTA
AACTGTTCCCGGGCTCCTTTGAGCTAAGTCAGCACCCGGAAGCTCCCCTT
TGTCAGAGTTACGACGAagttaattagaatttaatggcaATTACAAGAGG
TACGTGTGTAGGAATTTTTGTGATTTGCGGGTATTTATGAGAAAATATGA
ATGTTGTGACTTACAAATATTTATGGTGAAATATGAATCAAGAGTAAATA
AAATCATGATGTGGTTCGCGAACATTAGTCCGAACATTAAGAATTGTGGT
GCAGTAAAAGCAATTTGGAGATTAAAGATTTAAGGCGCAATACAAGTAAA
GAATAGAAAATATAAATGGAAACGTAAAATTGAAGAACTGAAATTTTGAG
TATATTCCAGGAACGATAACGCGTTAACGAAACTCCATGGTTTGGGGATA
TGTACTGATGCCTTGTGCAGTGACAGCAGAAACCATGGTTGAAAGTCGAT
CGCATGTGCGAATCATTCGCAGCGAATAAGAGTATATATACATAATGTCA
GAGCACGCAATCTTTGAGAATTCATCCTCGAAGGGCCCATTATCGAGGAC
GTTGACTTCAGTTTGCAAGCCTgaatagaaataaaatttcATAGAGTACG
TATCATGAGTAATATAGCCGAAGGAAGGCGAGTAGCAATACACAGATGAA
TATGTTCCTGATGAGAAAGATAACGGTGTATTTGCTTAACGTAAGCACAC
ATTGAAATGGTAGCCCAGCAAGATTACACAAACACGCTTTGGGAAGGCAT
CTAATGGAAATGAAGTATTAAACAAATAGAGGCACCAAAGATTATGTACC
GTATGGGAAAGAGGAATCCCAGAAAGATATAaaggaaaaactttcaaaat
cagCAAAAGGCTAAGATagaattcaatataaaaaaaaaggggATGAGAAA
TATCATGCGCAAAATGAGAGaagaattaaaataaaatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069104-exon-scaffold_493-1491911889:10341..11778 | TCONS_00069104-exon-scaffold_493-1491911889:10341..11778 | Clytia hemisphaerica | exon |
| TCONS_00069104-exon-scaffold_493-1510915933:10341..11778 | TCONS_00069104-exon-scaffold_493-1510915933:10341..11778 | Clytia hemisphaerica | exon |
| TCONS_00069104-exon-scaffold_493-1575043694:10341..11778 | TCONS_00069104-exon-scaffold_493-1575043694:10341..11778 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_493 | supercontig | scaffold_493:10341..11778 . |
Blast
The following BLAST results are available for this feature:
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