|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069084 ID=TCONS_00069084|Name=TCONS_00069084|organism=Clytia hemisphaerica|type=transcript|length=1082bp
attttagtttggttaaagatCATCATCTAacacaaaaatttttcaaaatg
ttttttcttcgcctaAAATAAGGTCCTCGAAGTTGAAATGCTCtttttcg
caaaagtcttcattttcttcttcatcaagtTTTTTAATcgcattttttaa
attttcagatttaggAATAGTTGGCCTAGCAAAAAATCTATAAGATGCCA
TAGTTTTGAGGCAAAAATCTATATTCTATGCAtggcaaatatgaaaaatt
cactatggtcaaaGCCCTTAATACAGTAACGCCATACCTCGAACACGGAC
GGGGGACACAGTaaaattgttcgagttatggaaattttGTTTCGAGGTAT
CAGGTTAATGTAATTTGAAACAATcgaaatcagccatatttgtttgtttt
ttttttattttgacatgtgacatttgttttgattttgtatcccgctgcat
acggtttgtttacaaatttcgccatacttttatgtccctttaagacaCGA
AATCGGATTGATTAAAATTAAAGATAACAAAGAGATTCGAATATTCGGTA
TTCTAGGAAATTCTGCCTCTGTGGTGGGTGTAAAGCCCGGTTGAGGCACT
CAGGTGAAAATGGGAccgggacgtgccgctggtcagggtcccttttctAG
GTTCTTAAAATATATGACAGTgtcccaaatttactatttttaacatttgt
acCTGCCAGAGTcatcttttggttattttggacaattttcagggtggaaa
ttagaaaaatttatttagacaATGAAAAAGATATATGATCGATTTTTAAA
CTCTATAGGTCCAGATGAACTGCTTGAAGAACACAATCACAGTCTTGAAT
CACCAACGACTTCATCTGATGTTAAGACACACCGCAAAAGACGGATTCTC
TTTACAAGAGAACAGACGTACGAGTTACAAAAAGTCTTTCAATATCAACA
ATATTTGACAGTTCCACAACGTGATTTCTTATCAAGGAAAATCAACTTGA
CACCAACACAGGTATGAGTATTCATGATAgacaccactggagagtcttct
gagaactttttctattttttaagtgacgtatt Run BLAST on NCBI transcript from alignment at scaffold_493:216074..217155+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069084 ID=TCONS_00069084|Name=TCONS_00069084|organism=Clytia hemisphaerica|type=transcript|length=1082bp|location=Sequence derived from alignment at scaffold_493:216074..217155+ (Clytia hemisphaerica)
attttagtttggttaaagatCATCATCTAacacaaaaatttttcaaaatg
ttttttcttcgcctaAAATAAGGTCCTCGAAGTTGAAATGCTCtttttcg
caaaagtcttcattttcttcttcatcaagtTTTTTAATcgcattttttaa
attttcagatttaggAATAGTTGGCCTAGCAAAAAATCTATAAGATGCCA
TAGTTTTGAGGCAAAAATCTATATTCTATGCAtggcaaatatgaaaaatt
cactatggtcaaaGCCCTTAATACAGTAACGCCATACCTCGAACACGGAC
GGGGGACACAGTaaaattgttcgagttatggaaattttGTTTCGAGGTAT
CAGGTTAATGTAATTTGAAACAATcgaaatcagccatatttgtttgtttt
ttttttattttgacatgtgacatttgttttgattttgtatcccgctgcat
acggtttgtttacaaatttcgccatacttttatgtccctttaagacaCGA
AATCGGATTGATTAAAATTAAAGATAACAAAGAGATTCGAATATTCGGTA
TTCTAGGAAATTCTGCCTCTGTGGTGGGTGTAAAGCCCGGTTGAGGCACT
CAGGTGAAAATGGGAccgggacgtgccgctggtcagggtcccttttctAG
GTTCTTAAAATATATGACAGTgtcccaaatttactatttttaacatttgt
acCTGCCAGAGTcatcttttggttattttggacaattttcagggtggaaa
ttagaaaaatttatttagacaATGAAAAAGATATATGATCGATTTTTAAA
CTCTATAGGTCCAGATGAACTGCTTGAAGAACACAATCACAGTCTTGAAT
CACCAACGACTTCATCTGATGTTAAGACACACCGCAAAAGACGGATTCTC
TTTACAAGAGAACAGACGTACGAGTTACAAAAAGTCTTTCAATATCAACA
ATATTTGACAGTTCCACAACGTGATTTCTTATCAAGGAAAATCAACTTGA
CACCAACACAGGTATGAGTATTCATGATAgacaccactggagagtcttct
gagaactttttctattttttaagtgacgtatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069084-exon-scaffold_493-1491911889:216074..217155 | TCONS_00069084-exon-scaffold_493-1491911889:216074..217155 | Clytia hemisphaerica | exon |
| TCONS_00069084-exon-scaffold_493-1510915933:216074..217155 | TCONS_00069084-exon-scaffold_493-1510915933:216074..217155 | Clytia hemisphaerica | exon |
| TCONS_00069084-exon-scaffold_493-1575043694:216074..217155 | TCONS_00069084-exon-scaffold_493-1575043694:216074..217155 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_493 | supercontig | scaffold_493:216074..217155 + |
Blast
The following BLAST results are available for this feature:
|
