|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069082 ID=TCONS_00069082|Name=TCONS_00069082|organism=Clytia hemisphaerica|type=transcript|length=1178bp
aaaataaCCTAGGGATATTTCAAAATACCCTCTGGAGAGAAAAATTAAAG
ACTCCCTAGTAAGTGTTTTTTTATTCTCGAAATCAAAGTTTatataaaaa
tcaaactttttcgCATAAACAAAAGTGTGCAAAAAAAGGGGCCACCTACC
CAATATAATTGACTTAAAGTTCCTTATTGGTGGAATTTGAAAAGAGGGGA
GGGGAGCTATTAAAAGtataaagttaattttttttctatccttttgttcT
ACTAATTATTCTTCTTGAGACAAACAATAGTTTTCTGAAGTTGAttaact
ttcttttgtttaaaagctCCCATAGAACAATAACCACAATAGAGTATTTT
ATTTATACTTtgatttataatattttttggaaCAAAAGAGTTGCAGGGGG
AGGTCAACCCCTTTTTTGATAGTTTGTTTTAATTTGGTTAAAAGCCCATc
gagtttttcttttccttttttgcgTTAAAATAATTCCGATACAACGAGTA
AATTTCACACAGTTGAGAACGCTTACTCATTCGCTTTCAAAACATAGTTT
GAATTAGCCGTCGGGTTTTACTCTAGGAAAACATGTCCTTTAGTATTGAT
GCTCTTTTAAAGCCTGATCATAAGGAGAGAAGAAATTCAGGGAGTGAAAC
CGTAAGGCATCACTTTCATTATGATTTTGACGATTATGGAAGTGTTAGAT
CGTATCGAGGAGAAGACCAAAGAAGACGGAATGTTGTGGAAGACTTTATT
AAAAGTGGTAAGTAAATATTTTGTCTTCAAGATCAAGTTTGTACCCTTCT
CAATTTTCTTTCAAGACAAGAAAGTAAGATGATAAAgacacctctgtctc
acagccccggtggaacttttttcctcagtggggaataaaaattccttttg
aagCGGGGCTGTAATTTAAGGGTATTTTGccactggggacgaaatttctg
cttaattttccagtggggctggggtcccagtgggtctgtgacacaggggt
gtagaaATTAAGACGACAAAGTCTGAATGCGAGAGCCCTGTCCCGTGAAA
AAAGTAAAAGCGTGTCTTACAGatgatgaaaaagatgaaagttCCAAAAA
AAGCCTTTGTGCAAGCATTTTTAGCTACTAGTATAAACCTTCATCCAAGT
TAAAAGGctggctctgaccatagtcaaa Run BLAST on NCBI transcript from alignment at scaffold_493:214507..215684+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069082 ID=TCONS_00069082|Name=TCONS_00069082|organism=Clytia hemisphaerica|type=transcript|length=1178bp|location=Sequence derived from alignment at scaffold_493:214507..215684+ (Clytia hemisphaerica)
aaaataaCCTAGGGATATTTCAAAATACCCTCTGGAGAGAAAAATTAAAG
ACTCCCTAGTAAGTGTTTTTTTATTCTCGAAATCAAAGTTTatataaaaa
tcaaactttttcgCATAAACAAAAGTGTGCAAAAAAAGGGGCCACCTACC
CAATATAATTGACTTAAAGTTCCTTATTGGTGGAATTTGAAAAGAGGGGA
GGGGAGCTATTAAAAGtataaagttaattttttttctatccttttgttcT
ACTAATTATTCTTCTTGAGACAAACAATAGTTTTCTGAAGTTGAttaact
ttcttttgtttaaaagctCCCATAGAACAATAACCACAATAGAGTATTTT
ATTTATACTTtgatttataatattttttggaaCAAAAGAGTTGCAGGGGG
AGGTCAACCCCTTTTTTGATAGTTTGTTTTAATTTGGTTAAAAGCCCATc
gagtttttcttttccttttttgcgTTAAAATAATTCCGATACAACGAGTA
AATTTCACACAGTTGAGAACGCTTACTCATTCGCTTTCAAAACATAGTTT
GAATTAGCCGTCGGGTTTTACTCTAGGAAAACATGTCCTTTAGTATTGAT
GCTCTTTTAAAGCCTGATCATAAGGAGAGAAGAAATTCAGGGAGTGAAAC
CGTAAGGCATCACTTTCATTATGATTTTGACGATTATGGAAGTGTTAGAT
CGTATCGAGGAGAAGACCAAAGAAGACGGAATGTTGTGGAAGACTTTATT
AAAAGTGGTAAGTAAATATTTTGTCTTCAAGATCAAGTTTGTACCCTTCT
CAATTTTCTTTCAAGACAAGAAAGTAAGATGATAAAgacacctctgtctc
acagccccggtggaacttttttcctcagtggggaataaaaattccttttg
aagCGGGGCTGTAATTTAAGGGTATTTTGccactggggacgaaatttctg
cttaattttccagtggggctggggtcccagtgggtctgtgacacaggggt
gtagaaATTAAGACGACAAAGTCTGAATGCGAGAGCCCTGTCCCGTGAAA
AAAGTAAAAGCGTGTCTTACAGatgatgaaaaagatgaaagttCCAAAAA
AAGCCTTTGTGCAAGCATTTTTAGCTACTAGTATAAACCTTCATCCAAGT
TAAAAGGctggctctgaccatagtcaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069082-exon-scaffold_493-1491911889:214507..215684 | TCONS_00069082-exon-scaffold_493-1491911889:214507..215684 | Clytia hemisphaerica | exon |
| TCONS_00069082-exon-scaffold_493-1510915933:214507..215684 | TCONS_00069082-exon-scaffold_493-1510915933:214507..215684 | Clytia hemisphaerica | exon |
| TCONS_00069082-exon-scaffold_493-1575043694:214507..215684 | TCONS_00069082-exon-scaffold_493-1575043694:214507..215684 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_493 | supercontig | scaffold_493:214507..215684 + |
Blast
The following BLAST results are available for this feature:
|
