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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069057 ID=TCONS_00069057|Name=TCONS_00069057|organism=Clytia hemisphaerica|type=transcript|length=1023bp
agagaATGATACTGCATATATTTATCCATGGTCTCCAACCAAATATCTCT
TATATGGAAAATACACGGAAGAGGAGCTAATGGAAAAACGTAAGAAACGG
AAAACGGAACAATCAGAACAAAATGTTGTGTCTATAttaaaaaggccaaa
aaatacTGATGAAGATTCTTCCTCCAAGGCAACGTCTTCCGGCGTCAGAT
TACTGGAAGAAATCGTTATGGAGGAAGCAAACCCAAAACATCCTAAACTT
CCATCCATGGCTGTATTTTCACCAAATCAACACAAAGATTTACTTACAAA
CATACCCAAAGACAACATCACGAGAAGTCGggcaaaatcaaaatctaaga
AACGGAATATTAAAGGACTGGATTCTAGTTTTTCGTTGATTGGTCAAACG
ATTTCGAGAACCNAGAAACGGAATATTAAAGGACTGGACTCTAGTTTTAC
GTTGATTGGTCAAACGATTTCGAGAACTGAAAATGATGGTTTGCCACAGC
TGCCTTCACCAAAAAAACTCAACGAATCTGTTTTTGGTTGTTTGCGAAAC
ATTGAGGGCGTAGTGACATCGAAACACAATAAAACGCCCCATGACGTGTC
ATATAAAATGCCGCCCATAAGCCAAGTACCAAGAAAACCATTGATTAAAA
CACAGATCAATAAAATATATACAATGAATACGACTTCAAATTTGGAGAAC
TTGAATTACCTTGCTGAAGAGGAATTTGAAGTCCCTTTCCCATTGATTTC
TGCTGATCGATCAAAAAGAACTTTGATTCACCAGAGACAAGAGAAACAGG
GCGTACTAAGAAGAAGATAAAAGTGATTTTGTACATGTTTCATagaattt
tacaaaaagaattgagatgagctggagtttttataagatgcttccctaat
ttagtcatttttgccacttgttAGGGtagaaattggaaaattgtgTTCTG
ACAGGTCACCATTTTACAAAAATACctatctgacagggtcaactTTTCGA
ACTctagcggcacgtccccgtcg Run BLAST on NCBI protein sequence of TCONS_00069057-protein >TCONS_00069057-protein ID=TCONS_00069057-protein|Name=TCONS_00069057-protein|organism=Clytia hemisphaerica|type=polypeptide|length=272bp
ENDTAYIYPWSPTKYLLYGKYTEEELMEKRKKRKTEQSEQNVVSILKRPK
NTDEDSSSKATSSGVRLLEEIVMEEANPKHPKLPSMAVFSPNQHKDLLTN
IPKDNITRSRAKSKSKKRNIKGLDSSFSLIGQTISRTXKRNIKGLDSSFT
LIGQTISRTENDGLPQLPSPKKLNESVFGCLRNIEGVVTSKHNKTPHDVS
YKMPPISQVPRKPLIKTQINKIYTMNTTSNLENLNYLAEEEFEVPFPLIS
ADRSKRTLIHQRQEKQGVLRRR Run BLAST on NCBI transcript from alignment at scaffold_492:153372..154394 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069057 ID=TCONS_00069057|Name=TCONS_00069057|organism=Clytia hemisphaerica|type=transcript|length=1023bp|location=Sequence derived from alignment at scaffold_492:153372..154394 (Clytia hemisphaerica)
cgacggggacgtgccgctagAGTTCGAAAagttgaccctgtcagatagGT
ATTTTTGTAAAATGGTGACCTGTCAGAAcacaattttccaatttctaCCC
Taacaagtggcaaaaatgactaaattagggaagcatcttataaaaactcc
agctcatctcaattctttttgtaaaattctATGAAACATGTACAAAATCA
CTTTTATCTTCTTCTTAGTACGCCCTGTTTCTCTTGTCTCTGGTGAATCA
AAGTTCTTTTTGATCGATCAGCAGAAATCAATGGGAAAGGGACTTCAAAT
TCCTCTTCAGCAAGGTAATTCAAGTTCTCCAAATTTGAAGTCGTATTCAT
TGTATATATTTTATTGATCTGTGTTTTAATCAATGGTTTTCTTGGTACTT
GGCTTATGGGCGGCATTTTATATGACACGTCATGGGGCGTTTTATTGTGT
TTCGATGTCACTACGCCCTCAATGTTTCGCAAACAACCAAAAACAGATTC
GTTGAGTTTTTTTGGTGAAGGCAGCTGTGGCAAACCATCATTTTCAGTTC
TCGAAATCGTTTGACCAATCAACGTAAAACTAGAGTCCAGTCCTTTAATA
TTCCGTTTCTNGGTTCTCGAAATCGTTTGACCAATCAACGAAAAACTAGA
ATCCAGTCCTTTAATATTCCGTTtcttagattttgattttgccCGACTTC
TCGTGATGTTGTCTTTGGGTATGTTTGTAAGTAAATCTTTGTGTTGATTT
GGTGAAAATACAGCCATGGATGGAAGTTTAGGATGTTTTGGGTTTGCTTC
CTCCATAACGATTTCTTCCAGTAATCTGACGCCGGAAGACGTTGCCTTGG
AGGAAGAATCTTCATCAgtattttttggcctttttaaTATAGACACAACA
TTTTGTTCTGATTGTTCCGTTTTCCGTTTCTTACGTTTTTCCATTAGCTC
CTCTTCCGTGTATTTTCCATATAAGAGATATTTGGTTGGAGACCATGGAT
AAATATATGCAGTATCATtctct Coding sequence (CDS) from alignment at scaffold_492:153372..154394 >TCONS_00069057 ID=TCONS_00069057|Name=TCONS_00069057|organism=Clytia hemisphaerica|type=CDS|length=819bp|location=Sequence derived from alignment at scaffold_492:153372..154394 (Clytia hemisphaerica)
TTATCTTCTTCTTAGTACGCCCTGTTTCTCTTGTCTCTGGTGAATCAAAG
TTCTTTTTGATCGATCAGCAGAAATCAATGGGAAAGGGACTTCAAATTCC
TCTTCAGCAAGGTAATTCAAGTTCTCCAAATTTGAAGTCGTATTCATTGT
ATATATTTTATTGATCTGTGTTTTAATCAATGGTTTTCTTGGTACTTGGC
TTATGGGCGGCATTTTATATGACACGTCATGGGGCGTTTTATTGTGTTTC
GATGTCACTACGCCCTCAATGTTTCGCAAACAACCAAAAACAGATTCGTT
GAGTTTTTTTGGTGAAGGCAGCTGTGGCAAACCATCATTTTCAGTTCTCG
AAATCGTTTGACCAATCAACGTAAAACTAGAGTCCAGTCCTTTAATATTC
CGTTTCTNGGTTCTCGAAATCGTTTGACCAATCAACGAAAAACTAGAATC
CAGTCCTTTAATATTCCGTTtcttagattttgattttgccCGACTTCTCG
TGATGTTGTCTTTGGGTATGTTTGTAAGTAAATCTTTGTGTTGATTTGGT
GAAAATACAGCCATGGATGGAAGTTTAGGATGTTTTGGGTTTGCTTCCTC
CATAACGATTTCTTCCAGTAATCTGACGCCGGAAGACGTTGCCTTGGAGG
AAGAATCTTCATCAgtattttttggcctttttaaTATAGACACAACATTT
TGTTCTGATTGTTCCGTTTTCCGTTTCTTACGTTTTTCCATTAGCTCCTC
TTCCGTGTATTTTCCATATAAGAGATATTTGGTTGGAGACCATGGATAAA
TATATGCAGTATCATtctc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069057-exon-scaffold_492-1491911889:153372..154394 | TCONS_00069057-exon-scaffold_492-1491911889:153372..154394 | Clytia hemisphaerica | exon |
| TCONS_00069057-exon-scaffold_492-1510915933:153372..154394 | TCONS_00069057-exon-scaffold_492-1510915933:153372..154394 | Clytia hemisphaerica | exon |
| TCONS_00069057-exon-scaffold_492-1575043694:153372..154394 | TCONS_00069057-exon-scaffold_492-1575043694:153372..154394 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_492 | supercontig | scaffold_492:153372..154394 . |
Blast
The following BLAST results are available for this feature:
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