TCONS_00069046 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069046
Unique NameTCONS_00069046
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length251

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069046 ID=TCONS_00069046|Name=TCONS_00069046|organism=Clytia hemisphaerica|type=transcript|length=251bp
ataaaaagaatgaCACAGAATGAAAAGAATTAGAATAGGTAGCAGGGTAT
CAACAGAAGCTTGGCGGTTTGATAATGCTAAATGCCTTAGAGCTGAAGAT
CGTTGGTCTTTCTCTAAATTCGGTGAAAAATGGCCAGATGCGCGTGTTTT
TGGTACAGTGATAGGTAGATCTGGCCAAAAATTTGATGTCAAATGGGACA
TTGATGGAGAAACTATTGCTTTTGAGATCGATTGCTTATTTAAAGAAGGT
A
Run BLAST on NCBI

transcript from alignment at scaffold_492:37530..37780

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069046 ID=TCONS_00069046|Name=TCONS_00069046|organism=Clytia hemisphaerica|type=transcript|length=251bp|location=Sequence derived from alignment at scaffold_492:37530..37780 (Clytia hemisphaerica)
TACCTTCTTTAAATAAGCAATCGATCTCAAAAGCAATAGTTTCTCCATCA
ATGTCCCATTTGACATCAAATTTTTGGCCAGATCTACCTATCACTGTACC
AAAAACACGCGCATCTGGCCATTTTTCACCGAATTTAGAGAAAGACCAAC
GATCTTCAGCTCTAAGGCATTTAGCATTATCAAACCGCCAAGCTTCTGTT
GATACCCTGCTACCTATTCTAATTCTTTTCATTCTGTGtcattcttttta
t
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043032XLOC_043032Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069046-exon-scaffold_492-1491911889:37530..37780TCONS_00069046-exon-scaffold_492-1491911889:37530..37780Clytia hemisphaericaexon
TCONS_00069046-exon-scaffold_492-1510915933:37530..37780TCONS_00069046-exon-scaffold_492-1510915933:37530..37780Clytia hemisphaericaexon
TCONS_00069046-exon-scaffold_492-1575043694:37530..37780TCONS_00069046-exon-scaffold_492-1575043694:37530..37780Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_492supercontigscaffold_492:37530..37780 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.754611	0	0	0	3.05291	0	0.970172	2.72479	0	1.57532	0	2.51283	3.01121	1.04239	4.28493	5.05823	6.7978	5.22565	6.41735	5.87588	5.83681	3.20286	2.59567	1.57323	0.810192	0.723077	3.10416	4.41713	5.02536	5.97338
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069046 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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