|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069039 ID=TCONS_00069039|Name=TCONS_00069039|organism=Clytia hemisphaerica|type=transcript|length=200bp
TTGCttcgaaaatcgataaaattgataaagttgataaaattagaaatcag
ATCTAATGATTTGTTTTCATTATTCGTTTTTAGGCTAAAGAATGTCAAGA
TGAAAACAAGAGGGCGTACTCAGtatGGGTTTCCGAGATCATGCTACAGC
AGacGCAAGTTGCAACAGTCATTGACTACTACAACCGTTGGATAAAGGTA Run BLAST on NCBI transcript from alignment at scaffold_492:155596..156755- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069039 ID=TCONS_00069039|Name=TCONS_00069039|organism=Clytia hemisphaerica|type=transcript|length=1160bp|location=Sequence derived from alignment at scaffold_492:155596..156755- (Clytia hemisphaerica)
TTGCTTCGAAAATCGATAAAATTGATAAAGTTGATAAAATTAGAAATCAG
ATCTAATGATTTGTTTTCATTATTCGTTTTTAGGCTAAAGAATGTCAAGA
TGAAAACAAGAGGGCGTACTCAGGTCTGTATTATTCACTGTATGGGCTTT
TTGTGTATTCGTTTATTTTAGAAGTATTTGGCTAGCCGATTCTTTCTGCT
AAGGCTTGAACACAGATCTGTTGCCTCCTACCAACTAAAGATTTGAAGTG
TTAAAAGTGGTGAAAGTACCCTAAAATTAGTTTCTAAAAATGTGATTTCA
ATTCTCATCCCAACTGGGAAAGTCTTACTTTAACTCTGAGACCTTACTCC
TATAACCATGGGTGAGTCCAGGAATGTTTGTCCTTGTGAAATATATGTCC
TATCATGCGGTATCATAAAGGGAGAGCATACAGCTGCGGTGCGCAAGGTT
GTGGGTTTGATCCCCAGCTGCGTCATACCAAAGATTCCCAAAATGGTACT
TGATGCCTCTTTGCTTGATGCTCAGCAACTAAAGAGACGGATCAAGGGTA
AGTGGAGAAATCCAGGGAAAGGAGTGGCGCCCTCTCCCACTTTCGGGTAG
ACAGCTAGAGAAAAGGGAGCCTTCGGGTCGCTCTCGACTGCGGTCGCAAA
CTTACTTACTTATGCCCTATATTTTATCTTTGTTTTTTTTTTTCATTTTA
GTATGGGTTTCCGAGATCATGCTACAGCAGGTAAATAGAAGATTACATTT
TCGTTTTCAAAACCTTGAAAACTAAAATCTCAACTAAAAATAGCCATTAT
CTCTTTTAGGTCGCCTCAATATCTACAAAATAGCGAAAAATTTCTGCACA
AAAAACTATAATAAGGACGTAAGGCCTCGATGGCTAAAATATTGATAACA
AATTTCTAAGAAAGTTACAAAATAATAATCGCAAAATAGTGAAAATAAGA
ACATTTTTTTAGGCTTAAAATTCAAAAAGCTAAGAACATCCGTAGGCTTC
GAAATATTTGGATGTCCTCATAAAAAACGTGAAAAAAGGTTGAAAAGGGT
TCATTTCTCAAGTCCAGTTTTCTTTCTTTGCTTTATAACCTTCAATTTTT
CTTCATTTTCAGACGCAAGTTGCAACAGTCATTGACTACTACAACCGTTG
GATAAAGGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069039-exon-scaffold_492-1575043694:156633..156755 | TCONS_00069039-exon-scaffold_492-1575043694:156633..156755 | Clytia hemisphaerica | exon |
| TCONS_00069039-exon-scaffold_492-1575043694:156026..156054 | TCONS_00069039-exon-scaffold_492-1575043694:156026..156054 | Clytia hemisphaerica | exon |
| TCONS_00069039-exon-scaffold_492-1575043694:155596..155643 | TCONS_00069039-exon-scaffold_492-1575043694:155596..155643 | Clytia hemisphaerica | exon |
| TCONS_00069039-exon-scaffold_492-1510915933:156633..156755 | TCONS_00069039-exon-scaffold_492-1510915933:156633..156755 | Clytia hemisphaerica | exon |
| TCONS_00069039-exon-scaffold_492-1510915933:156026..156054 | TCONS_00069039-exon-scaffold_492-1510915933:156026..156054 | Clytia hemisphaerica | exon |
| TCONS_00069039-exon-scaffold_492-1510915933:155596..155643 | TCONS_00069039-exon-scaffold_492-1510915933:155596..155643 | Clytia hemisphaerica | exon |
| TCONS_00069039-exon-scaffold_492-1491911889:156633..156755 | TCONS_00069039-exon-scaffold_492-1491911889:156633..156755 | Clytia hemisphaerica | exon |
| TCONS_00069039-exon-scaffold_492-1491911889:156026..156054 | TCONS_00069039-exon-scaffold_492-1491911889:156026..156054 | Clytia hemisphaerica | exon |
| TCONS_00069039-exon-scaffold_492-1491911889:155596..155643 | TCONS_00069039-exon-scaffold_492-1491911889:155596..155643 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_492 | supercontig | scaffold_492:155596..156755 - |
Blast
The following BLAST results are available for this feature:
|
