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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068925 ID=TCONS_00068925|Name=TCONS_00068925|organism=Clytia hemisphaerica|type=transcript|length=937bp
ggagaatttcaaaaagttaaagattCAATCGTTTCGTTATTTTCTAAATA
TAAAGGTTATTTTTCTATGTACATGCATGTCCATATAATAGTTAAAAAGT
TTCCCAAGTAACCCATGAGCAGCCCCTTAGAAGGGTTCcacatttgaaag
aaaagtaaacTCCTCGGACAAACACTTCTGTGAATATAGATATCCATCTT
GGAGCAAGGAAATAATTTTACCACTCCTCAAAGAAGAACCAGGCTTTCGG
TTCATCCTCTAGCAAACAGTTTCTTATGGGAAGTATATCTACAGAGGTAT
GCGATTTTGCTATTCAGACTACGAAGCGGGGCAACAATTCGTCTTTTGCG
AAATAGGGTACCTGTATACTCTCTTTTGAGATTTCCCTTGGTTACTGgta
tccactaacggattcgtgctccttatatcTCCTGCAGTTTTGTAGTGATC
TGTGTTTCCCTTTCGATTTCTCTTTATCCGTTGAACACAATAATCTAACG
ACTGATTCACGATTCACTATTGCataaaaagttttaatatcCCATACCCT
TGGCAACTagacaaaatatgaaaataattccccaaaatatattttatata
aaCTCTTATGACCGAAAGTAAAAAAGGTAGAAATGTTTATAAATTGTTAA
TTAATAAGCTAGCTGTATGTATAATGACGTGCGTTTCTAATATCAAATAC
AGAAAAATGGAAGTCTATTCTATGATGACACTATTTAAAACATTCTtatc
agaaaaaaactgaaTGGCTGCTTTAGTCGTACTCTAATCTAGTGACCCAT
AATACCGAGTTTAATCTTTCAGCtcattgtataagggttgcgaagctcaa
tatcttaaggccggtctccacttgcgcgcgcttcaatcgcacttttcgag
aaaagcttccacgctattggccaaaagaaaaattaag Run BLAST on NCBI transcript from alignment at scaffold_49:311614..312550 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068925 ID=TCONS_00068925|Name=TCONS_00068925|organism=Clytia hemisphaerica|type=transcript|length=937bp|location=Sequence derived from alignment at scaffold_49:311614..312550 (Clytia hemisphaerica)
cttaatttttcttttggccaatagcgtggaagcttttctcgaaaagtgcg
attgaagcgcgcgcaagtggagaccggccttaagatattgagcttcgcaa
cccttatacaatgaGCTGAAAGATTAAACTCGGTATTATGGGTCACTAGA
TTAGAGTACGACTAAAGCAGCCAttcagtttttttctgataAGAATGTTT
TAAATAGTGTCATCATAGAATAGACTTCCATTTTTCTGTATTTGATATTA
GAAACGCACGTCATTATACATACAGCTAGCTTATTAATTAACAATTTATA
AACATTTCTACCTTTTTTACTTTCGGTCATAAGAGtttatataaaatata
ttttggggaattattttcatattttgtctAGTTGCCAAGGGTATGGgata
ttaaaactttttatGCAATAGTGAATCGTGAATCAGTCGTTAGATTATTG
TGTTCAACGGATAAAGAGAAATCGAAAGGGAAACACAGATCACTACAAAA
CTGCAGGAgatataaggagcacgaatccgttagtggatacCAGTAACCAA
GGGAAATCTCAAAAGAGAGTATACAGGTACCCTATTTCGCAAAAGACGAA
TTGTTGCCCCGCTTCGTAGTCTGAATAGCAAAATCGCATACCTCTGTAGA
TATACTTCCCATAAGAAACTGTTTGCTAGAGGATGAACCGAAAGCCTGGT
TCTTCTTTGAGGAGTGGTAAAATTATTTCCTTGCTCCAAGATGGATATCT
ATATTCACAGAAGTGTTTGTCCGAGGAgtttacttttctttcaaatgtgG
AACCCTTCTAAGGGGCTGCTCATGGGTTACTTGGGAAACTTTTTAACTAT
TATATGGACATGCATGTACATAGAAAAATAACCTTTATATTTAGAAAATA
ACGAAACGATTGaatctttaactttttgaaattctcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068925-exon-scaffold_49-1491911889:311614..312550 | TCONS_00068925-exon-scaffold_49-1491911889:311614..312550 | Clytia hemisphaerica | exon |
| TCONS_00068925-exon-scaffold_49-1510915933:311614..312550 | TCONS_00068925-exon-scaffold_49-1510915933:311614..312550 | Clytia hemisphaerica | exon |
| TCONS_00068925-exon-scaffold_49-1575043694:311614..312550 | TCONS_00068925-exon-scaffold_49-1575043694:311614..312550 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_49 | supercontig | scaffold_49:311614..312550 . |
Blast
The following BLAST results are available for this feature:
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