TCONS_00068875 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068875
Unique NameTCONS_00068875
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2021

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068875 ID=TCONS_00068875|Name=TCONS_00068875|organism=Clytia hemisphaerica|type=transcript|length=2021bp
GTTAAGTATCTTTCCTGGTCGCAAGAAGTTCAATATTTCCTTTTACAAAT
CAAATCGAAACTGATTTAATTTTTGTTGTATAATCAAAGTTGTAGTTTTT
TTAGAATGAATTTTagaatgaaaattatatttttgttatgTGTGGTGATC
TGTATGGTTCAGTGCAAGAAGAAACATGTCTCTTCATCAGCATCATCACA
CACACGACGTTCAAAGATCTCATCATCCATGCCATCGCTTGGTGATTCAC
CAGAAACTAACTCTGAAGAAGCTGTCTCCACCAATGATGATGGTGATGAC
TCTGTTGATGATCATCAAAGCCACCAGAAAgGTAGCAAGAGAGGAAAGAT
ATCTTCAGAGAATGCAGCAAACTTTGGTAACAATGTTGTCGTCAAAGAAG
GAATCAACCCCTCAGCTGCTTTCGTAGTCAAAGAAGAGAATCATAAAGGC
TTTCAAGGAAGAGACAAAGTCATTCAccagaaaaatgataaaaacaacaa
aacaaagaagaaatttaaacaagctaaaaaatcaaaacaatctaAAGACC
ATGACATGATGGCCAGATTAAAGAAAATTGCTAAAGAGATAGCTGATGTG
GAGcataagaaagaagaaaaagctGCTATAGAGGCTTCTCAACAGAACAA
AAAGAAAGGAAAGAAGGTGAAATCTATTGATAAAGATATATCTACTGAGA
ATTCTCATGGACGAAGTGATGCAACATTGTTGTCAAACAAACCAAGCGTC
CACGAGCCTTTCCAGTGTCCATGGAGTTGTTTCTGGACGTGCAGTGCATA
TTGTCCAGCAGAATGCTGCAATAATCCTTACAGCTGTCCTCTTAGTTGCA
AAACCATCTGTGCGCCGCAGTGTAAAGATAAATGCTGTGCCCCTGGTGCT
AGGAAATTGCCAAAGCTTCAATTACCATTAATACAACCTGAACGAAATGT
TTCTCCTAAACTCTCAACGTTCACCAACACTCAAACAGTCAATACCAACG
TTGCTAGACCATTAAGCACATTCCCGAAGCTAACCAGCTATGGACGAGAC
ATTTCAGAGAAAATTAAGATTCTAAAACAACAAAGTAACTATGCAGCTAA
CCTTCTCCAAGGTTTTACATCAAATTGTCCAGCACTTTGTTCGAAAGTAT
GTACACCCATCGTGTGTCGTAGATCTTGCTGCACTCCTTATCCACAACAG
CAGCAGCAACCATTATCGCAATATGCAGCAATAGCACCACAAAGGACTTC
TTCATATTCATTTTACCAACAATCTCAGCAAAGAGCATATTGTCCACCGA
TTTGCCAGAGCTCTTGTATTGAACAATGTCCAAACCAATGTTGTACAACT
GCACCAAGACCTTATTTGTAAAACATTGGGAATGAGATTAGTGTGGTGAA
ATTAACATAACAAGGTTGCTGTATTGAGGTATGTAACTTACTGTCAAATG
CAATTAAATTGAcgaggaaaaaaataattcaccctcttctcacagacaca
ctgggaccccttcccattggaaaaatttgtcaaaatatctTCCCTAGTGG
AAAATCATACTCTATTTTCTGTCAACACTAAAATAATAAGATACTCtgta
agcaaatcctcactgcaaaaaaaatgcTATCCTCGCcgaattttctggct
caaaaacaatggaattcaaattctcagccattaaaaaaacctgggaatat
caatcccatcGAATTTTGTCAATCTGTTAAATTTACCCCCGCTggcccac
cgggtctgtgagaaggggctgTATATATGTGTGGTACAATCAATCGAATT
GGGAGTTTTCCTTCTCAGGTTTCAGTTAATTCTCATGAAAAAGTGGTTAA
CTGAAGATCAAATGTTCAATATTATTAAAACAACATAGTTATGTGATATA
TAAAtaattgtaaataaataaaaataaataacacttaaaataattaaaac
ttaTGATtcgtaaaaaaatttcttttgctcGTTGCCAAATATATTCTGCA
TTTCAATCGTAGGTAGTCTAc
Run BLAST on NCBI

protein sequence of TCONS_00068875-protein

>TCONS_00068875-protein ID=TCONS_00068875-protein|Name=TCONS_00068875-protein|organism=Clytia hemisphaerica|type=polypeptide|length=421bp
MNFRMKIIFLLCVVICMVQCKKKHVSSSASSHTRRSKISSSMPSLGDSPE
TNSEEAVSTNDDGDDSVDDHQSHQKGSKRGKISSENAANFGNNVVVKEGI
NPSAAFVVKEENHKGFQGRDKVIHQKNDKNNKTKKKFKQAKKSKQSKDHD
MMARLKKIAKEIADVEHKKEEKAAIEASQQNKKKGKKVKSIDKDISTENS
HGRSDATLLSNKPSVHEPFQCPWSCFWTCSAYCPAECCNNPYSCPLSCKT
ICAPQCKDKCCAPGARKLPKLQLPLIQPERNVSPKLSTFTNTQTVNTNVA
RPLSTFPKLTSYGRDISEKIKILKQQSNYAANLLQGFTSNCPALCSKVCT
PIVCRRSCCTPYPQQQQQPLSQYAAIAPQRTSSYSFYQQSQQRAYCPPIC
QSSCIEQCPNQCCTTAPRPYL
Run BLAST on NCBI

transcript from alignment at scaffold_49:510128..513849-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068875 ID=TCONS_00068875|Name=TCONS_00068875|organism=Clytia hemisphaerica|type=transcript|length=3722bp|location=Sequence derived from alignment at scaffold_49:510128..513849- (Clytia hemisphaerica)
GTTAAGTATCTTTCCTGGTCGCAAGAAGTTCAATATTTCCTTTTACAAAT
CAAATCGAAACTGATTTAATTTTTGTTGTATAATCAAAGTTGTAGTTTTT
TTAGAATGAATTTTAGAATGAAAATTATATTTTTGTTATGTGTGGTGATC
TGTATGGTTCAGTGCAAGAAGAAACATGGTAAGCTACCAATTATGATATC
CGCTGGCAAAGCTTTTGTATTGGGTTTCTATTCTTTCAAGTTATATTACC
AAGCTTTGTTAAGATCGTATAGCACTATGCACCGAATGTAAAAATAGTAG
CAAATCTGCACAAATTTATTCGTTTGTACGACTTGCGATCCCATCCTCCT
TTGCGTTAATTAATTATAATATCAAAAGAAATGTAACAGCATTCACAGTT
TTCCAATAATTTCGAAATGAATTGTGGGATTGGAACTCGTACAAATTTCT
AATTGAAATAAGTATGAAGTGTGATGACGCGGAGTGCTATTGGAGAAAGT
TAGATCTTCCAAAAGTAATAACCAATAAAACAGTTTTCTTTATCTTGATG
TTAAAAGAAGCTTTGTAGTTTTGATTTGATTTTTTTTCTCTTTTCTTAGT
CTCTTCATCAGCATCATCACACACACGACGTTCAAAGATCTCATCATCCA
TGCCATCGCTTGGTGATTCACCAGAAACTAACTCTGAAGAAGCTGTCTCC
ACCAATGATGATGGTGATGACTCTGTTGATGATCATCAAAGCCACCAGAA
AGGTATATTTTTCATTTAAAGAATGAATTTTTTTGCATTCTAAGCAAAGA
CAATTTTTTTTCTTTTTTTTCTTAAGAAATTCAAAAAAATTTGAGGCCTT
TTAGATATTCTTAACTTTTTTGATTTTAAGCCTAAAAATATGTTAAGAAG
TTTTTTTTTTAAGTATTTGTCTTTAAGTATTTTTGTCATATTTCTAAAGA
AATTTTGCTCTTAGAATGTTCTTAGATTTCTAGCCTAGAAGTCTTACGTT
TTTTCTATACTTTGCTCTCATAAGAAAACGGGTATTTGTCTATGCGGCTT
CTTGATGAAATTGACATAAGATTGAAAGTATTTGGATTGTGTTGGTGAAT
AATAACACAACTTTATTCTCTTCATATTCCAAGTAGCAAGAGTTTGGTTT
TTGACCTTTAGGGTCTGCAAATTGTATGCTTTAGGATCTGTAAAACCTTA
GAACGTTTCTAGAATGGCCTAAAAGTCTCTTGTTCTCATATACTTTGTTT
TTATAAGAAAATGTGTGTTTAGCTATGCGGCTTCTTGATGAAATCGACAT
AAGATTGAAAGTATTCGGATTGTGTTGGTGAATAATAACAACATTTTATT
CTCTTCATATTCCAGGTAGCAAGAGAGGAAAGATATCTTCAGAGAATGCA
GCAAACTTTGGTAACAATGTTGTCGTCAAAGAAGGAATCAACCCCTCAGC
TGCTTTCGTAGTCAAAGAAGAGAATCATAAAGGTTTGTACCTTAAAATTG
TGGCATTTGCTAAAGTACTGCAGAACCTCCCCCTGCTAGAAAAAATTGTC
AAAATTGCACCTTTAAGACTGTTTGGGAATTTTGTACTGCTATGATAGAG
CCATAGAGATTGTCTTACCCTGAAATTTGCATTTTAAAGGACCATGTGCT
TTGAAATCTTTTCTAGAACCTACTACACGTAAGAATGGGTGCTATGAAGG
CTTTTTTATTTTGGTTCTAAGCCTAAATATTTTCAAAACGTATTCATATT
TTCAGCGTTTTCATTGGTCTAATTTTCTTGTTTTACATTTTTTAAAATGT
ATCAGAATGTTCTTAAATTTTTAACCTCGCAGCCTTGTGTTCTTTAAACT
TTGTTCTTATATAAAAAAACACGTATTCTTGCAATTCTTTTATAGGCTTT
CAAGGAAGAGACAAAGTCATTCACCAGAAAAATGATAAAAACAACAAAAC
AAAGAAGAAATTTAAACAAGCTAAAAAATCAAAACAATCTAAAGACCATG
ACATGATGGCCAGATTAAAGAAAATTGCTAAAGAGATAGCTGATGTGGAG
CATAAGAAAGAAGAAAAAGCTGCTATAGAGGCTTCTCAACAGAACAAAAA
GAAAGGAAAGAAGGTGAAATCTATTGATAAAGATATATCTACTGAGAATT
CTCATGGACGAAGTGATGCAACATTGTTGTCAAACAAACCAAGCGGTAAG
CAACCTTGTTGTTTATTGATGCTTAAACTGTTATAGTTGGATAATAACTA
TTATATCAAAAAAGATACTTTTCTCCCAAGTAACTCTGTAGAAAATAGAG
GATTTTCAAATTTGAACTTAAGAAGCCAGAGAGGTTTGAATTTAAAAGGA
AAGTTGATTTCCAAACCGGCAACTTTTAAGCGATATTCTGATGAAAGTTT
GAAGTTTGAATTCCTCTCAATTCGTTCTTTTTCCTTCCTTCTTCTTCAGT
CCACGAGCCTTTCCAGTGTCCATGGAGTTGTTTCTGGACGTGCAGTGCAT
ATTGTCCAGCAGAATGCTGCAATAATCCTTACAGCTGTCCTCTTAGTTGC
AAAACCATCTGTGCGCCGCAGTGTAAAGATAAATGCTGTGCCCCTGGTGC
TAGGAAATTGCCAAAGCTTCAATTACCATTAATACAACCTGAACGAAATG
TTTCTCCTAAACTCTCAACGTTCACCAACACTCAAACAGTCAATACCAAC
GTTGCTAGACCATTAAGCACATTCCCGAAGCTAACCAGCTATGGACGAGA
CATTTCAGAGAAAATTAAGATTCTAAAACAACAAAGTAACTATGCAGCTA
ACCTTCTCCAAGGTTTTACATCAAATTGTCCAGCACTTTGTTCGAAAGTA
TGTACACCCATCGTGTGTCGTAGATCTTGCTGCACTCCTTATCCACAACA
GCAGCAGCAACCATTATCGCAATATGCAGCAATAGCACCACAAAGGACTT
CTTCATATTCATTTTACCAACAATCTCAGCAAAGAGCATATTGTCCACCG
ATTTGCCAGAGCTCTTGTATTGAACAATGTCCAAACCAATGTTGTACAAC
TGCACCAAGACCTTATTTGTAAAACATTGGGAATGAGATTAGTGTGGTGA
AATTAACATAACAAGGTTGCTGTATTGAGGTATGTAACTTACTGTCAAAT
GCAATTAAATTGACGAGGAAAAAAATAATTCACCCTCTTCTCACAGACAC
ACTGGGACCCCTTCCCATTGGAAAAATTTGTCAAAATATCTTCCCTAGTG
GAAAATCATACTCTATTTTCTGTCAACACTAAAATAATAAGATACTCTGT
AAGCAAATCCTCACTGCAAAAAAAATGCTATCCTCGCCGAATTTTCTGGC
TCAAAAACAATGGAATTCAAATTCTCAGCCATTAAAAAAACCTGGGAATA
TCAATCCCATCGAATTTTGTCAATCTGTTAAATTTACCCCCGCTGGCCCA
CCGGGTCTGTGAGAAGGGGCTGTATATATGTGTGGTACAATCAATCGAAT
TGGGAGTTTTCCTTCTCAGGTTTCAGTTAATTCTCATGAAAAAGTGGTTA
ACTGAAGATCAAATGTTCAATATTATTAAAACAACATAGTTATGTGATAT
ATAAATAATTGTAAATAAATAAAAATAAATAACACTTAAAATAATTAAAA
CTTATGATTCGTAAAAAAATTTCTTTTGCTCGTTGCCAAATATATTCTGC
ATTTCAATCGTAGGTAGTCTAC

Coding sequence (CDS) from alignment at scaffold_49:510128..513849-

>TCONS_00068875 ID=TCONS_00068875|Name=TCONS_00068875|organism=Clytia hemisphaerica|type=CDS|length=6330bp|location=Sequence derived from alignment at scaffold_49:510128..513849- (Clytia hemisphaerica)
TCCACGAGCCTTTCCAGTGTCCATGGAGTTGTTTCTGGACGTGCAGTGCA
TATTGTCCAGCAGAATGCTGCAATAATCCTTACAGCTGTCCTCTTAGTTG
CAAAACCATCTGTGCGCCGCAGTGTAAAGATAAATGCTGTGCCCCTGGTG
CTAGGAAATTGCCAAAGCTTCAATTACCATTAATACAACCTGAACGAAAT
GTTTCTCCTAAACTCTCAACGTTCACCAACACTCAAACAGTCAATACCAA
CGTTGCTAGACCATTAAGCACATTCCCGAAGCTAACCAGCTATGGACGAG
ACATTTCAGAGAAAATTAAGATTCTAAAACAACAAAGTAACTATGCAGCT
AACCTTCTCCAAGGTTTTACATCAAATTGTCCAGCACTTTGTTCGAAAGT
ATGTACACCCATCGTGTGTCGTAGATCTTGCTGCACTCCTTATCCACAAC
AGCAGCAGCAACCATTATCGCAATATGCAGCAATAGCACCACAAAGGACT
TCTTCATATTCATTTTACCAACAATCTCAGCAAAGAGCATATTGTCCACC
GATTTGCCAGAGCTCTTGTATTGAACAATGTCCAAACCAATGTTGTACAA
CTGCACCAAGACCTTATTTGTAAGCTTTCAAGGAAGAGACAAAGTCATTC
ACCAGAAAAATGATAAAAACAACAAAACAAAGAAGAAATTTAAACAAGCT
AAAAAATCAAAACAATCTAAAGACCATGACATGATGGCCAGATTAAAGAA
AATTGCTAAAGAGATAGCTGATGTGGAGCATAAGAAAGAAGAAAAAGCTG
CTATAGAGGCTTCTCAACAGAACAAAAAGAAAGGAAAGAAGGTGAAATCT
ATTGATAAAGATATATCTACTGAGAATTCTCATGGACGAAGTGATGCAAC
ATTGTTGTCAAACAAACCAAGCGGTAGCAAGAGAGGAAAGATATCTTCAG
AGAATGCAGCAAACTTTGGTAACAATGTTGTCGTCAAAGAAGGAATCAAC
CCCTCAGCTGCTTTCGTAGTCAAAGAAGAGAATCATAAAGTCTCTTCATC
AGCATCATCACACACACGACGTTCAAAGATCTCATCATCCATGCCATCGC
TTGGTGATTCACCAGAAACTAACTCTGAAGAAGCTGTCTCCACCAATGAT
GATGGTGATGACTCTGTTGATGATCATCAAAGCCACCAGAAAGATGAATT
TTAGAATGAAAATTATATTTTTGTTATGTGTGGTGATCTGTATGGTTCAG
TGCAAGAAGAAACATGTCCACGAGCCTTTCCAGTGTCCATGGAGTTGTTT
CTGGACGTGCAGTGCATATTGTCCAGCAGAATGCTGCAATAATCCTTACA
GCTGTCCTCTTAGTTGCAAAACCATCTGTGCGCCGCAGTGTAAAGATAAA
TGCTGTGCCCCTGGTGCTAGGAAATTGCCAAAGCTTCAATTACCATTAAT
ACAACCTGAACGAAATGTTTCTCCTAAACTCTCAACGTTCACCAACACTC
AAACAGTCAATACCAACGTTGCTAGACCATTAAGCACATTCCCGAAGCTA
ACCAGCTATGGACGAGACATTTCAGAGAAAATTAAGATTCTAAAACAACA
AAGTAACTATGCAGCTAACCTTCTCCAAGGTTTTACATCAAATTGTCCAG
CACTTTGTTCGAAAGTATGTACACCCATCGTGTGTCGTAGATCTTGCTGC
ACTCCTTATCCACAACAGCAGCAGCAACCATTATCGCAATATGCAGCAAT
AGCACCACAAAGGACTTCTTCATATTCATTTTACCAACAATCTCAGCAAA
GAGCATATTGTCCACCGATTTGCCAGAGCTCTTGTATTGAACAATGTCCA
AACCAATGTTGTACAACTGCACCAAGACCTTATTTGTAAGCTTTCAAGGA
AGAGACAAAGTCATTCACCAGAAAAATGATAAAAACAACAAAACAAAGAA
GAAATTTAAACAAGCTAAAAAATCAAAACAATCTAAAGACCATGACATGA
TGGCCAGATTAAAGAAAATTGCTAAAGAGATAGCTGATGTGGAGCATAAG
AAAGAAGAAAAAGCTGCTATAGAGGCTTCTCAACAGAACAAAAAGAAAGG
AAAGAAGGTGAAATCTATTGATAAAGATATATCTACTGAGAATTCTCATG
GACGAAGTGATGCAACATTGTTGTCAAACAAACCAAGCGGTAGCAAGAGA
GGAAAGATATCTTCAGAGAATGCAGCAAACTTTGGTAACAATGTTGTCGT
CAAAGAAGGAATCAACCCCTCAGCTGCTTTCGTAGTCAAAGAAGAGAATC
ATAAAGTCTCTTCATCAGCATCATCACACACACGACGTTCAAAGATCTCA
TCATCCATGCCATCGCTTGGTGATTCACCAGAAACTAACTCTGAAGAAGC
TGTCTCCACCAATGATGATGGTGATGACTCTGTTGATGATCATCAAAGCC
ACCAGAAAGATGAATTTTAGAATGAAAATTATATTTTTGTTATGTGTGGT
GATCTGTATGGTTCAGTGCAAGAAGAAACATGTCCACGAGCCTTTCCAGT
GTCCATGGAGTTGTTTCTGGACGTGCAGTGCATATTGTCCAGCAGAATGC
TGCAATAATCCTTACAGCTGTCCTCTTAGTTGCAAAACCATCTGTGCGCC
GCAGTGTAAAGATAAATGCTGTGCCCCTGGTGCTAGGAAATTGCCAAAGC
TTCAATTACCATTAATACAACCTGAACGAAATGTTTCTCCTAAACTCTCA
ACGTTCACCAACACTCAAACAGTCAATACCAACGTTGCTAGACCATTAAG
CACATTCCCGAAGCTAACCAGCTATGGACGAGACATTTCAGAGAAAATTA
AGATTCTAAAACAACAAAGTAACTATGCAGCTAACCTTCTCCAAGGTTTT
ACATCAAATTGTCCAGCACTTTGTTCGAAAGTATGTACACCCATCGTGTG
TCGTAGATCTTGCTGCACTCCTTATCCACAACAGCAGCAGCAACCATTAT
CGCAATATGCAGCAATAGCACCACAAAGGACTTCTTCATATTCATTTTAC
CAACAATCTCAGCAAAGAGCATATTGTCCACCGATTTGCCAGAGCTCTTG
TATTGAACAATGTCCAAACCAATGTTGTACAACTGCACCAAGACCTTATT
TGTAAGCTTTCAAGGAAGAGACAAAGTCATTCACCAGAAAAATGATAAAA
ACAACAAAACAAAGAAGAAATTTAAACAAGCTAAAAAATCAAAACAATCT
AAAGACCATGACATGATGGCCAGATTAAAGAAAATTGCTAAAGAGATAGC
TGATGTGGAGCATAAGAAAGAAGAAAAAGCTGCTATAGAGGCTTCTCAAC
AGAACAAAAAGAAAGGAAAGAAGGTGAAATCTATTGATAAAGATATATCT
ACTGAGAATTCTCATGGACGAAGTGATGCAACATTGTTGTCAAACAAACC
AAGCGGTAGCAAGAGAGGAAAGATATCTTCAGAGAATGCAGCAAACTTTG
GTAACAATGTTGTCGTCAAAGAAGGAATCAACCCCTCAGCTGCTTTCGTA
GTCAAAGAAGAGAATCATAAAGTCTCTTCATCAGCATCATCACACACACG
ACGTTCAAAGATCTCATCATCCATGCCATCGCTTGGTGATTCACCAGAAA
CTAACTCTGAAGAAGCTGTCTCCACCAATGATGATGGTGATGACTCTGTT
GATGATCATCAAAGCCACCAGAAAGATGAATTTTAGAATGAAAATTATAT
TTTTGTTATGTGTGGTGATCTGTATGGTTCAGTGCAAGAAGAAACATGTC
CACGAGCCTTTCCAGTGTCCATGGAGTTGTTTCTGGACGTGCAGTGCATA
TTGTCCAGCAGAATGCTGCAATAATCCTTACAGCTGTCCTCTTAGTTGCA
AAACCATCTGTGCGCCGCAGTGTAAAGATAAATGCTGTGCCCCTGGTGCT
AGGAAATTGCCAAAGCTTCAATTACCATTAATACAACCTGAACGAAATGT
TTCTCCTAAACTCTCAACGTTCACCAACACTCAAACAGTCAATACCAACG
TTGCTAGACCATTAAGCACATTCCCGAAGCTAACCAGCTATGGACGAGAC
ATTTCAGAGAAAATTAAGATTCTAAAACAACAAAGTAACTATGCAGCTAA
CCTTCTCCAAGGTTTTACATCAAATTGTCCAGCACTTTGTTCGAAAGTAT
GTACACCCATCGTGTGTCGTAGATCTTGCTGCACTCCTTATCCACAACAG
CAGCAGCAACCATTATCGCAATATGCAGCAATAGCACCACAAAGGACTTC
TTCATATTCATTTTACCAACAATCTCAGCAAAGAGCATATTGTCCACCGA
TTTGCCAGAGCTCTTGTATTGAACAATGTCCAAACCAATGTTGTACAACT
GCACCAAGACCTTATTTGTAAGCTTTCAAGGAAGAGACAAAGTCATTCAC
CAGAAAAATGATAAAAACAACAAAACAAAGAAGAAATTTAAACAAGCTAA
AAAATCAAAACAATCTAAAGACCATGACATGATGGCCAGATTAAAGAAAA
TTGCTAAAGAGATAGCTGATGTGGAGCATAAGAAAGAAGAAAAAGCTGCT
ATAGAGGCTTCTCAACAGAACAAAAAGAAAGGAAAGAAGGTGAAATCTAT
TGATAAAGATATATCTACTGAGAATTCTCATGGACGAAGTGATGCAACAT
TGTTGTCAAACAAACCAAGCGGTAGCAAGAGAGGAAAGATATCTTCAGAG
AATGCAGCAAACTTTGGTAACAATGTTGTCGTCAAAGAAGGAATCAACCC
CTCAGCTGCTTTCGTAGTCAAAGAAGAGAATCATAAAGTCTCTTCATCAG
CATCATCACACACACGACGTTCAAAGATCTCATCATCCATGCCATCGCTT
GGTGATTCACCAGAAACTAACTCTGAAGAAGCTGTCTCCACCAATGATGA
TGGTGATGACTCTGTTGATGATCATCAAAGCCACCAGAAAGATGAATTTT
AGAATGAAAATTATATTTTTGTTATGTGTGGTGATCTGTATGGTTCAGTG
CAAGAAGAAACATGTCCACGAGCCTTTCCAGTGTCCATGGAGTTGTTTCT
GGACGTGCAGTGCATATTGTCCAGCAGAATGCTGCAATAATCCTTACAGC
TGTCCTCTTAGTTGCAAAACCATCTGTGCGCCGCAGTGTAAAGATAAATG
CTGTGCCCCTGGTGCTAGGAAATTGCCAAAGCTTCAATTACCATTAATAC
AACCTGAACGAAATGTTTCTCCTAAACTCTCAACGTTCACCAACACTCAA
ACAGTCAATACCAACGTTGCTAGACCATTAAGCACATTCCCGAAGCTAAC
CAGCTATGGACGAGACATTTCAGAGAAAATTAAGATTCTAAAACAACAAA
GTAACTATGCAGCTAACCTTCTCCAAGGTTTTACATCAAATTGTCCAGCA
CTTTGTTCGAAAGTATGTACACCCATCGTGTGTCGTAGATCTTGCTGCAC
TCCTTATCCACAACAGCAGCAGCAACCATTATCGCAATATGCAGCAATAG
CACCACAAAGGACTTCTTCATATTCATTTTACCAACAATCTCAGCAAAGA
GCATATTGTCCACCGATTTGCCAGAGCTCTTGTATTGAACAATGTCCAAA
CCAATGTTGTACAACTGCACCAAGACCTTATTTGTAAGCTTTCAAGGAAG
AGACAAAGTCATTCACCAGAAAAATGATAAAAACAACAAAACAAAGAAGA
AATTTAAACAAGCTAAAAAATCAAAACAATCTAAAGACCATGACATGATG
GCCAGATTAAAGAAAATTGCTAAAGAGATAGCTGATGTGGAGCATAAGAA
AGAAGAAAAAGCTGCTATAGAGGCTTCTCAACAGAACAAAAAGAAAGGAA
AGAAGGTGAAATCTATTGATAAAGATATATCTACTGAGAATTCTCATGGA
CGAAGTGATGCAACATTGTTGTCAAACAAACCAAGCGGTAGCAAGAGAGG
AAAGATATCTTCAGAGAATGCAGCAAACTTTGGTAACAATGTTGTCGTCA
AAGAAGGAATCAACCCCTCAGCTGCTTTCGTAGTCAAAGAAGAGAATCAT
AAAGTCTCTTCATCAGCATCATCACACACACGACGTTCAAAGATCTCATC
ATCCATGCCATCGCTTGGTGATTCACCAGAAACTAACTCTGAAGAAGCTG
TCTCCACCAATGATGATGGTGATGACTCTGTTGATGATCATCAAAGCCAC
CAGAAAGATGAATTTTAGAATGAAAATTATATTTTTGTTATGTGTGGTGA
TCTGTATGGTTCAGTGCAAGAAGAAACATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042923XLOC_042923Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068875-exon-scaffold_49-1575043694:513672..513849TCONS_00068875-exon-scaffold_49-1575043694:513672..513849Clytia hemisphaericaexon
TCONS_00068875-exon-scaffold_49-1575043694:513098..513250TCONS_00068875-exon-scaffold_49-1575043694:513098..513250Clytia hemisphaericaexon
TCONS_00068875-exon-scaffold_49-1575043694:512368..512484TCONS_00068875-exon-scaffold_49-1575043694:512368..512484Clytia hemisphaericaexon
TCONS_00068875-exon-scaffold_49-1575043694:511655..511954TCONS_00068875-exon-scaffold_49-1575043694:511655..511954Clytia hemisphaericaexon
TCONS_00068875-exon-scaffold_49-1575043694:510128..511400TCONS_00068875-exon-scaffold_49-1575043694:510128..511400Clytia hemisphaericaexon
TCONS_00068875-exon-scaffold_49-1510915933:513672..513849TCONS_00068875-exon-scaffold_49-1510915933:513672..513849Clytia hemisphaericaexon
TCONS_00068875-exon-scaffold_49-1510915933:513098..513250TCONS_00068875-exon-scaffold_49-1510915933:513098..513250Clytia hemisphaericaexon
TCONS_00068875-exon-scaffold_49-1510915933:512368..512484TCONS_00068875-exon-scaffold_49-1510915933:512368..512484Clytia hemisphaericaexon
TCONS_00068875-exon-scaffold_49-1510915933:511655..511954TCONS_00068875-exon-scaffold_49-1510915933:511655..511954Clytia hemisphaericaexon
TCONS_00068875-exon-scaffold_49-1510915933:510128..511400TCONS_00068875-exon-scaffold_49-1510915933:510128..511400Clytia hemisphaericaexon
TCONS_00068875-exon-scaffold_49-1491911889:513672..513849TCONS_00068875-exon-scaffold_49-1491911889:513672..513849Clytia hemisphaericaexon
TCONS_00068875-exon-scaffold_49-1491911889:513098..513250TCONS_00068875-exon-scaffold_49-1491911889:513098..513250Clytia hemisphaericaexon
TCONS_00068875-exon-scaffold_49-1491911889:512368..512484TCONS_00068875-exon-scaffold_49-1491911889:512368..512484Clytia hemisphaericaexon
TCONS_00068875-exon-scaffold_49-1491911889:511655..511954TCONS_00068875-exon-scaffold_49-1491911889:511655..511954Clytia hemisphaericaexon
TCONS_00068875-exon-scaffold_49-1491911889:510128..511400TCONS_00068875-exon-scaffold_49-1491911889:510128..511400Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068875-proteinTCONS_00068875-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:510128..513849 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.35097	1.41288	1.04193	0.932611	3.82855	4.23552	7.65238	8.41307	2.62336	1.02184	8.09329	10.2844	8.79657	7.22131	5.52554	13.2161	7.14329	7.50242	0.145693	0.457371	4.33506	3.7673	3.59188	3.10227	3.80488	5.02799	0.93965	0.42978	0.195584	0.44282
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR009009RlpA-like_DPBB
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068875 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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