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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068826 ID=TCONS_00068826|Name=TCONS_00068826|organism=Clytia hemisphaerica|type=transcript|length=714bp
aaattaaaaaaaacactatcATCAAGAAATTTGTTGTGTACAAATGATGG
ATAAGAAGAAGTAGATGTTTATTTATCGAAAAGAAGAAAGAGTTCAGCGA
GAATGAGCTACAAAAGATTTAGAGGACACCTTCCTGAAGCAGAGATACTG
AATGGACATTCGAAACCTGCTGTTAAGACATACGGTGTTTTCCCCTTCAA
CACAATGAAACAAGAGAACGGGAAGAAAAATACGGAAAATACGGAAATTA
TTTCAAGTGACAATCTTTTGTACCGGAAAAAGAAGAGTAAGAAAGTTGGT
CATTTTGGAACATTATATTTCATAGCTGTAGATTAATTCTCTTAGATTTT
GAAGATATATTTGATGAatatttattttgtaaatttacCCTATTTTCAAT
GAGACTCTTCAATGTTTGTAAAAAGAAAGATGTAACTCCTTGAAATAAGA
CAGTCACAATTGTTTTTGTATCAATATTATCTGGAACTATTAATGTTATA
ACTTTCGATATTATTCGAGTCTGAAGCGATtgtgtgctcgttgaaaagat
aatcaggATTGAAATAAGTATCatcaaatagaaaaaattcaaacaagttt
ggaaattgaagataaaaaatcaaGGAGAAGAACAAAAGTAATTACTCTAG
AATTGTACTAGTCCCGAATTTTCACATTCAATTCTAGAACGTTTATGAAA
ATTTCACTGAAAAC Run BLAST on NCBI transcript from alignment at scaffold_49:84505..86033- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068826 ID=TCONS_00068826|Name=TCONS_00068826|organism=Clytia hemisphaerica|type=transcript|length=1529bp|location=Sequence derived from alignment at scaffold_49:84505..86033- (Clytia hemisphaerica)
AAATTAAAAAAAACACTATCATCAAGAAATTTGTAAGTTCAATTTTTGTT
TTCTCGTTTTTGCGTTTTCTACAAGAGAAATCGTCGTCTTTCTTTCGAGA
ACGTTTTGGTCATTCCAACCCGTCGGTGTTTGAAATTTATAGGTAAAAAC
ATTTTGTTGATCCAAGATTTGATACCATATAGTACCGTTCTGCCAACTAG
AGTACTGAGCACTCTGGTGATCTTAAAGTTGAATTTTGTCTTTACCAGGA
AAGCGCACGAATTTCTTGTATTGTCTGTAGGTTGTCAGTCACCTGTTGAT
AAAATGTAAGCCTTTCTTTATCCATTTAAGTTTTTATCAAGATGAGCTTT
ACGTTAATTGGATTACAATACTGTCGCTGTATAACGAAACAATTGCAGTT
GCCAAAGAGATGTCCTGACTAAAGCCCTTTCACTTCATAGCTCTTTGTTT
TTATATTTGAAATTCTTGTTATACCTATTATTGTTATACCTACTACATTA
TGGTGGTATCATGGTGCGGTATTGATCTCAAAATATAGCGTTCAACATAA
AAAAAGAAGTGATCTAATTAACAAATCACAACGCATCGACTGTAAAGCTT
TTGATCTATCACCTCGCCAATCTCGTTCCCTGTGTATTATCAGCTTTTTA
TGCTTACTGATTGCTCTAAATATTCTCTGGCATCAATCAGTAACGTAAAT
AAAGCCTGGAATACACGGGAACGAGGTTGTCACCTTCGAACATCCGCTTC
TAAATCACTGGATCGCATGCTAGCATAGGGTATTTTTCTTAAAAACTTTC
GTGAACTACAAACTAAATGAGCTTCAATATTTCGTCTATCGTTTCAGGTT
GTGTACAAATGATGGATAAGAAGAAGTAGATGTTTATTTATCGAAAAGAA
GAAAGAGTTCAGCGAGAATGAGCTACAAAAGATTTAGAGGACACCTTCCT
GAAGCAGAGATACTGAATGGACATTCGAAACCTGCTGTTAAGACATACGG
TGTTTTCCCCTTCAACACAATGAAACAAGAGAACGGGAAGAAAAATACGG
AAAATACGGAAATTATTTCAAGTGACAATCTTTTGTACCGGAAAAAGAAG
AGTAAGAAAGTTGGTCATTTTGGAACATTATATTTCATAGCTGTAGATTA
ATTCTCTTAGATTTTGAAGATATATTTGATGAATATTTATTTTGTAAATT
TACCCTATTTTCAATGAGACTCTTCAATGTTTGTAAAAAGAAAGATGTAA
CTCCTTGAAATAAGACAGTCACAATTGTTTTTGTATCAATATTATCTGGA
ACTATTAATGTTATAACTTTCGATATTATTCGAGTCTGAAGCGATTGTGT
GCTCGTTGAAAAGATAATCAGGATTGAAATAAGTATCATCAAATAGAAAA
AATTCAAACAAGTTTGGAAATTGAAGATAAAAAATCAAGGAGAAGAACAA
AAGTAATTACTCTAGAATTGTACTAGTCCCGAATTTTCACATTCAATTCT
AGAACGTTTATGAAAATTTCACTGAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068826-exon-scaffold_49-1575043694:86002..86033 | TCONS_00068826-exon-scaffold_49-1575043694:86002..86033 | Clytia hemisphaerica | exon |
| TCONS_00068826-exon-scaffold_49-1575043694:84505..85186 | TCONS_00068826-exon-scaffold_49-1575043694:84505..85186 | Clytia hemisphaerica | exon |
| TCONS_00068826-exon-scaffold_49-1510915933:86002..86033 | TCONS_00068826-exon-scaffold_49-1510915933:86002..86033 | Clytia hemisphaerica | exon |
| TCONS_00068826-exon-scaffold_49-1510915933:84505..85186 | TCONS_00068826-exon-scaffold_49-1510915933:84505..85186 | Clytia hemisphaerica | exon |
| TCONS_00068826-exon-scaffold_49-1491911889:86002..86033 | TCONS_00068826-exon-scaffold_49-1491911889:86002..86033 | Clytia hemisphaerica | exon |
| TCONS_00068826-exon-scaffold_49-1491911889:84505..85186 | TCONS_00068826-exon-scaffold_49-1491911889:84505..85186 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_49 | supercontig | scaffold_49:84505..86033 - |
Blast
The following BLAST results are available for this feature:
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