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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068807 ID=TCONS_00068807|Name=TCONS_00068807|organism=Clytia hemisphaerica|type=transcript|length=991bp
GTGAACATAAGAGTAATCAAATTGGTTCGTATTTTTCGtaataaaatttc
cataattctcaaataataacaataataataacaataatacaaAATATCAC
TGTGATAAAGTCATAAGTACTCGtatgttttcaaaaaacatcttccaaaa
tttaagaattatTTGTCCTTAGCGGCCACAACATGAAGGAGCACATGATG
GCATACAAGCTGGCATAGGTGCTGCCATTTGTACTGGAGGTCGACAACAT
CCTGTTTGTTGGCAAGCTTGTGGACAAGATGCAGTTGGTTGTTGGGAGAT
GATAGCCATCCAATGTAAGCAAATTGGAGCACATGGTCGAGCTGGGGCAC
CTGGAGCTCCAGCTGGTCCCTGAGGTCCGCATGGTCCCATAGGTCCTTGT
GGTCCACCCATTCCCATTGGTCCCGCTGGACCCATTGGTCCTGGAACTCC
TACTGCTCCAGTAGCTCCTTGTGCTCCGCATGGTCCCATTGCTCCACATG
GAGCAGCTCCACCACAAGGGGCAGCCATCATCATAGGTGCTGCACAGGGT
GGAGCAGCGCAAGGGGCAGCCATTGGAGCGGCGCAGGGTGGGGCAGCACA
AGGAGCATACATAGCGGCCGCGCATGGTGGGGCAGCGCAAGGGGCGGGCA
TTGGAGCGGCGCAGGGTGGAGCAGCGCAAGGGGCGGGCATTGGAGCGGCA
CATGGTGGAGCAGCGCAAGGGGCGGGCATTGGAGCGGCACAGGGTGGGGC
AGCACATGGCATAGCTACAGGCATGGGTGGTGGAGCAGCACAACATTGAG
CACTGCAAGCTGGTGCACAATTTGGAGAGCACATGCCAGCACACATTTGA
CGCTTGGAAGCAGGTTTGGACTTTGAATCTTTGGTTTCTGTTGATGCTGG
TTTTTCAACTGAAAGAAGATTTGTCgattaatttcaaaaagattattcaa
attaatttttcatgagTTTTAATAATGTCTCATAATAATTT Run BLAST on NCBI transcript from alignment at scaffold_49:602301..603357+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068807 ID=TCONS_00068807|Name=TCONS_00068807|organism=Clytia hemisphaerica|type=transcript|length=1057bp|location=Sequence derived from alignment at scaffold_49:602301..603357+ (Clytia hemisphaerica)
GTGAACATAAGAGTAATCAAATTGGTTCGTATTTTTCGtaataaaatttc
cataattctcaaataataacaataataataacaataatacaaAATATCAC
TGTGATAAAGTCATAAGTACTCGtatgttttcaaaaaacatcttccaaaa
tttaagaattatTTGTCCTTAGCGGCCACAACATGAAGGAGCACATGATG
GCATACAAGCTGGCATAGGTGCTGCCATTTGTACTGGAGGTCGACAACAT
CCTGTTTGTTGGCAAGCTTGTGGACAAGATGCAGTTGGTTGTTGGGAGAT
GATAGCCATCCAATGTAAGCAAATTGGAGCACATGGTCGAGCTGGGGCAC
CTGGAGCTCCAGCTGGTCCCTGAGGTCCGCATGGTCCCATAGGTCCTTGT
GGTCCACCCATTCCCATTGGTCCCGCTGGACCCATTGGTCCTGGAACTCC
TACTGCTCCAGTAGCTCCTTGTGCTCCGCATGGTCCCATTGCTCCACATG
GAGCAGCTCCACCACAAGGGGCAGCCATCATCATAGGTGCTGCACAGGGT
GGAGCAGCGCAAGGGGCAGCCATTGGAGCGGCGCAGGGCGGGGCTGCACA
AGGGGCTGGACAAGGTGGAGCAGCGCAAGGGGCAGGCATCGGTGGTGCGC
AAGGTGGGGCAGCACAAGGAGCATACATAGCGGCCGCGCATGGTGGGGCA
GCGCAAGGGGCGGGCATTGGAGCGGCGCAGGGTGGAGCAGCGCAAGGGGC
GGGCATTGGAGCGGCACATGGTGGAGCAGCGCAAGGGGCGGGCATTGGAG
CGGCACAGGGTGGGGCAGCACATGGCATAGCTACAGGCATGGGTGGTGGA
GCAGCACAACATTGAGCACTGCAAGCTGGTGCACAATTTGGAGAGCACAT
GCCAGCACACATTTGACGCTTGGAAGCAGGTTTGGACTTTGAATCTTTGG
TTTCTGTTGATGCTGGTTTTTCAACTGAAAGAAGATTTGTCgattaattt
caaaaagattattcaaattaatttttcatgagTTTTAATAATGTCTCATA
ATAATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068807-exon-scaffold_49-1491911889:602301..602887 | TCONS_00068807-exon-scaffold_49-1491911889:602301..602887 | Clytia hemisphaerica | exon |
| TCONS_00068807-exon-scaffold_49-1510915933:602301..602887 | TCONS_00068807-exon-scaffold_49-1510915933:602301..602887 | Clytia hemisphaerica | exon |
| TCONS_00068807-exon-scaffold_49-1575043694:602301..602887 | TCONS_00068807-exon-scaffold_49-1575043694:602301..602887 | Clytia hemisphaerica | exon |
| TCONS_00068807-exon-scaffold_49-1491911889:602954..603357 | TCONS_00068807-exon-scaffold_49-1491911889:602954..603357 | Clytia hemisphaerica | exon |
| TCONS_00068807-exon-scaffold_49-1510915933:602954..603357 | TCONS_00068807-exon-scaffold_49-1510915933:602954..603357 | Clytia hemisphaerica | exon |
| TCONS_00068807-exon-scaffold_49-1575043694:602954..603357 | TCONS_00068807-exon-scaffold_49-1575043694:602954..603357 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_49 | supercontig | scaffold_49:602301..603357 + |
Blast
The following BLAST results are available for this feature:
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