TCONS_00068795 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068795
Unique NameTCONS_00068795
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2775

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068795 ID=TCONS_00068795|Name=TCONS_00068795|organism=Clytia hemisphaerica|type=transcript|length=2775bp
aTGGATGACATGAGGAGATATAAGTAATAACTAATTTGGATTTCTGCGtt
ccaaaataaaacaatttggtTGACTGGATTGAGAACGAATCTTTCAGtaa
aaaaaacaaagcaatGAATCGAAGTATGAATAACAAAAATCCAAAGATAT
TTGTCTATCTGATATCAGGCTTTCTTTTGGGGCTGGTTATACGTCTCAAA
TTTTCATCGTCATATCAAGCACTTTCGAAATGTCACGATAAAGTTATTTT
GGATCAAAAAGAACAATCTAAATCTGGTCGAAGCATAAATATAGAAAAGC
CAGTAACAGTAAAGGCAAAACCAAATCGATTTAACAATGACTACAGGCCT
TATTTTGTATACAGTGAGCTTGGTTTCAAAAATCTAATGTTTGTTGGTGT
CAAAATAAGTGAACAACAACTTATGACCAATGGTGTGACCATTAATAACA
CGTGGTCTTCAGATGATCAGACTGTTGTTTTCTTCACACCATACTCAAGA
GACAGTGAATTTCATAACCGATTTGTGAAGAAATTAAACCTTAACGTCAT
TCAATTACCAGATATTGTGGACACGTCGAGTGATTTGGAATTTTCATTGC
GTATTGTACAATATATGAAAGATCACCATTTGAATAAATATAACTGGTTT
ATTTTGAGTAATGTTAATGTTTATTTGAATATAGTTAATGCTGGAGATCA
TTTAAAACGGTTGAATTCGACACAACCAATCATACTGGCAAATAAAATTA
AAGGAGAATGCTCTTCAAGCCATGGCGTTATAATGAGTCATACAGCTCTT
TCAAACTATTACCAAACTGATGGAGCGGGTTTTCCTTCTGGGTTGTTATC
AAAACTGGGAAATAAGGAAACACTTTTTTGCAATTCCGAACGATTTCTTA
ATATCCAAAGCAGCAATATGCAACGAGTTTTAGGAGATGGAAACACCCTA
AATGTTATCTCTATTGCTCCTCTCAAATCAAACACGGATATGTTGAAATT
ACACAAAACTATCGTTCAAGAACGTTTAAAGGAAACTTTAAAAACTTCAC
GTAACTTACAAGCTTCGATCAAAGAATTTCATGATAGAGTGCCGAACGAT
GTGTTGGAGAAGAAATTAACATGGCCACTAGGCTATCCGCGACCATTCCG
ACCATCATCAAGATTTGAAGTTATTCAATGGACattatttgataaaaaca
aGATGTATGCTTTCACTGATCAAGAGCCAACCTCATCTTTCCCTGCTTCA
TATTATGGTGATTTTACAGAGATTCTACAAACAGTAAAACAAGCTATCAA
TCAAAAATATGGAAATCGTAGATTGGAATTGTTAAATGGATATCACAGAG
TTGATCCGAAAAGAGGTGCAGAATATCTGATTGAAATGAAGGACAAATCG
TCAGATAAAGTGTATCGTTATCAGTTACTTCGACCTTTCTCCAGAGTTGA
ATCACTTTCAATGCCAGCTGCTACAGAACAGAAAGGAATACACATTGTAC
TACCGTTACTAAAGGATGacatgaaatattttgaaaagttcaTGCAAATG
TACAAAAGACTTTGTTTACAATCTGGAGAAAATGTTGTTCTTCTAACTGT
CTTTGTCAATATTCGTGATGGGaagtttgaagaagaaaaagaaccgTTTC
TAGAATTCAAAAATCTGATTTCAAGATACAAGCAATCATACATGTGGGCT
CAATTACCATGGTTACAAGTTGGTGTTAAACACATTTCTGATGTCTTGGT
GATGGACATTGTGTCAATGAAACTACCTTCAAACGCTCTTATACTCTTGC
TCTCACATCATAATCATTTCACTGTCAATTTTTTAAACAGATGTCGTGTT
AACGTAGTGACTGGATTGCAGgtCTTTTTCCCCATTCCTTTCTTGGAATA
CAATCCAGACATTGTTTACAATGGCAAGCAGAAACCAGCATTTTCAGAAG
TACACACCACAACCGGGTTCTGGGGTCGAGACTCATATCAAGTTGGCTGT
TTCAATAATAATGATTATAAAGCAGCTCGTATGTGGAAAAATGACTTCCT
TGATGAAAACTTGCCTAACAATAAAACTATTCTTGGTGTTTTTGAAGGAT
CCAATCTTAATGTTTTCAGAGCTTTGGATAGTGAACTTCATACTTGGTAT
GAGTTTGAGAATTGTGTTTCAGATGCCAAAACAAATAAAACCGGATGTCA
TTTTAAGAATTCACAAAGACTTGGTAATAGAGCTCAGTTAGCTCaagttt
tctttgattttaataATTCGAAAAAACCATAGACATATTATCAGCATTAG
AAATATGTATTTTAGGCCTGGCGGAAGcagggagactggggagacttcag
cttccccacttttgagcaaatgagatttttttctcaaattcctagcaaat
tttatctcattttgagccttcagcctccccactttaagGTCGTTCCGCCG
GACctgtattttgaatatttagcATATTTTCTTAAGTAGATATGAGTTTT
CAATTATCATTGTATTCCTCAGggaaattaatgcgtgtccaaatttcaAA
CATGTTATTAGGCcacttatgatgacgtcataaaacaaGAGAATTAAATA
TCTTGAGAACTACTCagtaaaactttatgaaatttttacCAATGATATCA
AAAGGAGTATTGGGCTCTccagaaaaaagttttacatgggggttggagga
tataacaaattttagtgatttaccccccggacagggtgacttttggcccc
ccggacagTAGGtcttacccccgga
Run BLAST on NCBI

protein sequence of TCONS_00068795-protein

>TCONS_00068795-protein ID=TCONS_00068795-protein|Name=TCONS_00068795-protein|organism=Clytia hemisphaerica|type=polypeptide|length=722bp
MNRSMNNKNPKIFVYLISGFLLGLVIRLKFSSSYQALSKCHDKVILDQKE
QSKSGRSINIEKPVTVKAKPNRFNNDYRPYFVYSELGFKNLMFVGVKISE
QQLMTNGVTINNTWSSDDQTVVFFTPYSRDSEFHNRFVKKLNLNVIQLPD
IVDTSSDLEFSLRIVQYMKDHHLNKYNWFILSNVNVYLNIVNAGDHLKRL
NSTQPIILANKIKGECSSSHGVIMSHTALSNYYQTDGAGFPSGLLSKLGN
KETLFCNSERFLNIQSSNMQRVLGDGNTLNVISIAPLKSNTDMLKLHKTI
VQERLKETLKTSRNLQASIKEFHDRVPNDVLEKKLTWPLGYPRPFRPSSR
FEVIQWTLFDKNKMYAFTDQEPTSSFPASYYGDFTEILQTVKQAINQKYG
NRRLELLNGYHRVDPKRGAEYLIEMKDKSSDKVYRYQLLRPFSRVESLSM
PAATEQKGIHIVLPLLKDDMKYFEKFMQMYKRLCLQSGENVVLLTVFVNI
RDGKFEEEKEPFLEFKNLISRYKQSYMWAQLPWLQVGVKHISDVLVMDIV
SMKLPSNALILLLSHHNHFTVNFLNRCRVNVVTGLQVFFPIPFLEYNPDI
VYNGKQKPAFSEVHTTTGFWGRDSYQVGCFNNNDYKAARMWKNDFLDENL
PNNKTILGVFEGSNLNVFRALDSELHTWYEFENCVSDAKTNKTGCHFKNS
QRLGNRAQLAQVFFDFNNSKKP
Run BLAST on NCBI

transcript from alignment at scaffold_49:546658..558011+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068795 ID=TCONS_00068795|Name=TCONS_00068795|organism=Clytia hemisphaerica|type=transcript|length=11354bp|location=Sequence derived from alignment at scaffold_49:546658..558011+ (Clytia hemisphaerica)
aTGGATGACATGAGGAGATATAAGTAATAACTAATTTGGATTTCTGCGtt ccaaaataaaacaatttggtTGACTGGATTGAGAACGAATCTTTCAGGTA TTATTTTACAttagaaaagatttttggaaaaCTTCACCGAAAATCAAatc tactttttatttttacctttttttaattgggccattccagaaaatttttg ttaccccccgtcggacgacgtgcatcttttttctagcctcagaaataatt tttttttccagtggtggtcggaaattctgataaaaatccatgtacttttg taaaatgcatcggaaattccactcttttttgccttttttaattcaattgc cttggaaattcatacattttcttctctcgccttggaaatttcgaattttg gtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgccttggaaa tttcgaattttggtgaaaacttttgccctcggaaatcctgtgtcgtccgc ccccctgttacagacaaattctggaatggcccattttaaagcattttaaa agtGCACAtaatttgaattgattttttttcttattttgcctatttatttt tttcttttcttttacatagtctagtacctgagtacctctggcgatataac caaataacgttagttcctagcggggggagggactatattttatgtttgtt taagtaatgttttgtaatatatatgttcgtagtagtcagtgtagacctaa agctctaaaacagcatctaataacatgaaaaccagaatatgattcttcaa tgggaatcaaaactataaagtgcacttacaaacatcNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaagcgattctagctt tacgatagtgccgcgggacatcaatggatagtattcaatcatcattatcc ctttattttcattcctagaacttttgccaaaaaactcgggtaagttatgg catgtctcaaaatcctgaaaattaccataatttttgaagaccATTAGACG GCAGAAAATGGGGACCAACGTTGaatatcattaaaaggatcattttgcaa aaaaaaacttttcgaaattttgctttcgtcagcagaaatcaacaaaatac aaaattttgaaataaagtgctgatgtcagcaaaatttcaaaaaatttttt ttgcaaactgatccttttaatgatatGTAACTTCAGTCCGAATTTCATGC TTCTAtctttagccaaactggagttatttaaaaaacaagttttgctgacg tcagcattttttagtttttgcggtttttcgcgaaaataagggcgtaaaca attaggtaacacccctacagcgaaacttcatcatggtacccttcgtagca aatcattgttttccccattttctgccggctaatggccttcaaaaattatg gtaattttcaggtttttgagacatgccataacttacctgagaaaggaaaa atagaaaagttgtattttttactgctctattcacatactgaatttgaaag atcttctatgtggcgtttttttgcaaacttcNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNgtcccgcctttgcgggactttggcttaagtgct tgagtgcagcatagggtacaaagtccaaacatgcgtttcccgtaattttt atatgaagagttaggtctatactggtAGTGTACACGTGTCTTTGTTTCAA GCCAAAATCGCCATCCATTTTGCTCGACGAcagtaaaaacaccaaaatac agtcgtctgtttaggtgagcaaaggcgatatagagccgtgcatcaactat cgactttgttttgtatcaatttcacttaccgtcgccctcgatatcctccg atacataaactcggaaATAAgcagtacagtcaagtatcaatatttgaggt attacgaaaatcgctactttttgccgtaatcgctttcgtttttaacacaa ggtcttagcaacgggtacaCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNagcataacaaagacaaactcaggaggtaaggtaaa ttgcgttttgactgcttttaactgtttttctaataaagaatatcttcaaa cttgacttcactgatAAGTGCTATATCGTCAGCAAAGTCTGCATCTGTTA AATGAACGGCAGGATTAGGTGGACCAACAACCAAGCCTACCTTGAAGAAG AAAACCGCAGCTAGATATTTTCTCAACAGAAACGTGCATAAGGTAATCGA CAACTAGAATAAAGAGAAATGGTGCAAGGATATCACCCTGGAGAATACca gctaaaatagaaaaagtttaagtcTCACCATCAGGTGTTTGCACTGAAGA TTTTGTATTAGTGTACAGAAGTTTTATGGCATCTATGATCTTTTGAGGGA TGCCGTAAAGAGAGAGACTATCAAACATTGAATCGTGATCAACCGAATCA Aagcaatacaccgtttaacagtttcgccatctccaccgtagaggcggtag gcaaaaatgctcactttagtactgtggaaggttagagaaatgtaaacatt gccatttttttctttcctttaaagagaattttttagatatttgaacatga tattaatgacaattttatgtatctgtcctgaaaatttcacaaaaattcat ctagaggaaaagaagttatgattaaaagaaGTTCTTTACCTGCCATTTCT CTGCTGGGTTTTCTTATGAgaactggatgtttacctaccattttttacgg gggagagtgaagtttcccgtggttgccaaaatcaaaacaatggcaaattg ttcatacgcgtgcgcagttgagactgttaaacggtgtattcttgaaatca acaaaaatcaaaattgcttCACGATTGAAGTTTCTAGTTTCCTCTAAGAT TCGTCGAAGAGCAAGAACTTGGCTTAAAGTAGAACGACCACTTTGAAAAC CGTTTTGATTTTTACACAGAATGGGTTCAACATGAACTCGGATTCTATTC AGAAGAAGCTTGTTATAGATTTTTGCTGCGATTGGGAGAAGAGAGATACC ACGATAGTTTGTGGCAAGACTAAGTAAGGTCTCCCTTTTTTGGTACTGTA ACAATGGTCGATTTTAACCAGTATTATGTTATAAACAAGTCATAAGAGGT CAAATTTTGGTAGATAAGGCTTTCTAGGCCTGAAGAATGACCCCTTGAAT AGGAATTCACCAGCAGCTCATATTTGTAGTAATTTAACTTAAGTCTTTTT AGCTTTGACGTGACGAAGTAgtcttttgagtttttttgattttcaataat gattcaaatattttgaaactaTTTTCTCAgatttaaatgtttttgtaaaG AATTGGCTATGATAGATTGTGGACAATAATCCGACAATGTCAatgaattc tttttcttttttctagtaaaaaaaacaaagcaatGAATCGAAGTATGAAT AACAAAAATCCAAAGATATTTGTCTATCTGATATCAGGCTTTCTTTTGGG GCTGGTTATACGTCTCAAATTTTCATCGTCATATCAAGCACTTTCGAAAT GTCACGATAAAGTTATTTTGGATCAAAAAGAACAATCTAAATCTGGTCGA AGCATAAATATAGAAAAGCCAGTAACAGTAAAGGCAAAACCAAATCGATT TAACAATGACTACAGGCCTTATTTTGTATACAGTGAGCTTGGTTTCAAAA ATCTAATGTTTGTTGGTGTCAAAATAAGTGAACAACAACTTATGACCAAT GGTGTGACCATTAATAACACGTGGTCTTCAGATGATCAGACTGTTGTTTT CTTCACACCATACTCAAGAGACAGTGAATTTCATAACCGATTTGTGAAGA AATTAAACCTTAACGTCATTCAATTACCAGATATTGTGGACACGTCGAGT GATTTGGAATTTTCATTGCGTATTGTACAATATATGAAAGATCACCATTT GAATAAATATAACTGGTTTATTTTGAGTAATGTTAATGTTTATTTGAATA TAGTTAATGCTGGAGATCATTTAAAACGGTTGAATTCGACACAACCAATC ATACTGGCAAATAAAATTAAAGGAGAATGCTCTTCAAGCCATGGCGTTAT AATGAGTCATACAGCTCTTTCAAACTATTACCAAACTGATGGAGCGGGTT TTCCTTCTGGGTTGTTATCAAAACTGGGAAATAAGGAAACACTTTTTTGC GTGAGTTTTATATTTCTTCTAATAATAAAGATATTTTCTTGCCAAGGTAT TTACAATCTCAAACTACGTTGCATGCTTTAATCGATTGTGATTATTtgga aacttttctttttttgtgagAAACAAATTGCGTTTTTGCCTTTACCTTTC AAGGACTTTTTTACTATTAAATTTTAGAACTCgattaaaattttactttt aaatttacttttgaatCCACAAAGCTACAAAATCTAGTTTTTTGAAGGTG AatgaatttttctgctttttgtAGTAATCCTAATATTCTAAAACGACGGT TTTGACTTTTCTTTCGTTTTAGAATTCCGAACGATTTCTTAATATCCAAA GCAGCAATATGCAACGAGTTTTAGGAGATGGAAACACCCTAAATGTTATC TCTATTGCTCCTCTCAAATCAAACACGGATATGTTGAAATTACACAAAAC TATCGTTCAAGAACGTTTAAAGGAAACTTTAAAAACTTCACGTAACTTAC AAGCTTCGATCAAAGAATTTCATGATAGAGTGCCGAACGGTTTGTTCATT TAATTTACGTATATCTGAGTACCAATTAATGGCGATTTCAAATACACAAA TTTCCTATTAGTAGATTCATGTAAAAACGTCACGGAAAAAAGTCGAGaaa agctctgattggctgagagATACTTTGGACATTTTGAGATTGCAATTTAT GTGTGCAATTTACAACCCATCAGAGCTCTACTCGACGTTTTTTTGTGACT TTTGTATATGAATCTGCTTCTAAGGTGTGTGTTCGTTTTGACTTTTGACG ACAAACTGACGCTCTACACGACTGACCAGACAACAGACTACTCGGGACCA TCTACAAACATCCAAAACTCTCTGGAACTGAAGTGACAATTGACTGCTTT AAAAACTACACACTCGACTGGAAAATCCTACTCACAAAATATGACAGGTA CATAATATTTGACAATTTATTAAATTGAATAAGCCTAGGAATTAGGCGAA ATTATTCTTAATAAATTAGGAACTATCGACTTAAGAAAATACGGTACGAT GTTATTTTTTACTCAACAGCGTGATTTTCATTTGGTTCTAACTATAAAGT GTATTATCCTGCATAAGTTATCATTCCTATAAACTAAAATCGTAATAAGT ATAAACCCAGTAGGACACACGGCGTCTACAAAACGTTAGATGAGATTCTT AAACAACAGTTTTTGGCAACTCAGATGGTAGTAACCGAAGTGCAAAGGTA GGGCATTCGGGTGCTGCGGTGCGCAAGATACCGGGCTCAATCCCCTATTG GGTTATACCAAAGACCTCGCGCTTAATACGAAATGGTACTTGATTTATCT CTCTGCTTAATGCACATTTTGAATAGAAGAATATCTTAAAGAGAAGAATC GAGGGTAAATTGCGAGCAATCcaaggagaaagagtggcgtcTATCATCCC TACCTTAGGGAAGACAGTTATAGAAAGAGGACTCTTCGGGTCGCCTCAGA CTGCGATGGTACATTTTTTTCCATACAAAACTAAATGACCTTCAAAAAAG CCTACGCCTTTAAACCaattataaattttctttcaattcttaGATGTGTT GGAGAAGAAATTAACATGGCCACTAGGCTATCCGCGACCATTCCGACCAT CATCAAGATTTGAAGTTATTCAATGGACattatttgataaaaacaaGATG TATGCTTTCACTGATCAAGAGCCAACCTCATCTTTCCCTGCTTCATATTA TGGTGATTTTACAGAGATTCTACAAACAGTAAAACAAGCTATCAATCAAA AATATGGAAATCGTAGATTGGAATTGTTAAATGGATATCACAGAGTTGAT CCGAAAAGAGGTATTTTTACTgtcttttgaatcttttttcaatatttctt cgTTTAAAGTTTACATTTTGTCTCCATATTTCGAacttgaaaatggaaat ttgtCTGTTCAAATTAGATTCGCATGTGTAGGGTATACACATGCGAATTA AAGAAATGGTTCTCGAGCATTactttgaattatagaaagattcaaataat gaAAGTTTGAATTAGCAAGTCTATTGTATCTAAATTCTATGAAACGAAGC TTTTCTCTAATAGTACAAAATTTCTCTGACAACTTATCACCACAAAACCT TCGGTATATATTATGATGTTGTAAGACAAGACAGACAGTGCAATTTTCCA ATCGTTTCTTTCGGGTAGTAGTGAGTTTTATTTCGCAACACGAAATGTCT TCTGTTTCAAGGAtggttactcttaggtgccaaataaNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNcccccccccgtttatttggcacctaagagtagtgGTTCATTTGTGT TTATCCTGACTGAATGAGGAAGATGGTAAATCAGACTTTGTTTGACTGTC CTCAATTTTGAAGGTCTGATCAGCGGGTTGTTCTAACGTTTATATCTCTC TTGCTTCTTGATTccctggtcaaaattcttgacTCTTCCAAGATCTTAGT AAGATCTTGAAAAGAATTTTGACCAGGGTACACTATCGCTAAAGCTGTGA AATGACCGTTTCTTTAGGTGCAGAATATCTGATTGAAATGAAGGACAAAT CGTCAGATAAAGTGTATCGTTATCAGTTACTTCGACCTTTCTCCAGAGTT GAATCACTTTCAATGCCAGCTGCTACAGAACAGAAAGGAATACACATTGT ACTACCGTTACTAAAGTAAGTAAAAAATAACTTCTTTTCATAATATCAAT CTGGgttttttagaaagtttttctCTACGCAAAGTTAGTTGAAAAGATAT ACAATAGAGTCTATTTAGCTCGAACCTTTAttataactcaaatgtctcct taactcgaacaagtcttcacctcccttcagttaacaatgccttatagaTA CTTGCTCCATAACTCTTAATTACCttaaaattcaaacaaattttcgAATT TGCGTTTCTCGGGtgagttcgagttatggagattccacCGTATTGGTATC GCCTGGGACTAGTAAAAGATCGTtaaaatattggacagtcttTCAGTTTT CTAGATGATATTatgttatgttttattttcttccattgcttttttctatt tttctaatGACGTCACAGCATATTACCTAAACATATATTACTCAGTATGT ATTGAAATAAATCATTGCTGACCTTGCTTCCTATTTCAAATACTTAATTT CTTTGGTATTTTTCTTTTCGAAGGGATGacatgaaatattttgaaaagtt caTGCAAATGTACAAAAGACTTTGTTTACAATCTGGAGAAAATGTTGTTC TTCTAACTGTCTTTGTCAATATTCGTGATGGGaagtttgaagaagaaaaa gaaccgTTTCTAGAATTCAAAAATCTGATTTCAAGGTGCGAATTACTTGT GTTtaggcttttcctgaaaatttgaTTCTAAAATTCTAGATCCCCCTGGA GGATTTCCTGTATAcccttgaaattaaaatttcagtcaaatctttacttg tctgtacacagacccggtatctacggctaatttcaaaaaacaatgatctC ATTCTTACCAACACTAAACAACCCCCAATGCAAACTTCTTATATTTTCAG ATACAAGCAATCATACATGTGGGCTCAATTACCATGGTTACAAGTTGGTG TTAAACACATTTCTGATGTCTTGGTGATGGACATTGTGTCAATGAAACTA CCTTCAAACGCTCTTATACTCTTGCTCTCACATCATAATCATTTCACTGT CAATTTTTTAAACAGATGTCGTGTTAACGTAGTGACTGGATTGCAGGTAC AGTGGGACTTCTTTAACTggaatctctataactcgaatgtctccttaact cgaacaagttttctggccCCTTCAACCTTATAAAGCTTAAAAATTCATAA CTCtaaatttccataattcgaacaattGCATTTCTTTGGGTTCATCACCG TAATTAGATTCACCTTCTAAATTCAACTAGAGTGCAGAAGGAGCGTATTG AAGCATGTAATTAGGCACAGGATATTGTCTTTAGAAGGGTCTATATCCAA CGTTTCGAGATGTTTGAAAACAAGATAGATGTGTCATCGCCATGTATCGA AATCCTCCAAAGATTTTTCTACGATTTTTCCTCAGAGACCAGTCAGACAT ATTTTTAACCATTCTGTCAGTATCTATTGCTTGATAATCACTTAAAACGA GAGCACACTAGTGATTCTATTAacaattttaatgtttttttacttttcag gtCTTTTTCCCCATTCCTTTCTTGGAATACAATCCAGACATTGTTTACAA TGGCAAGCAGAAACCAGCATTTTCAGAAGTACACACCACAACCGGGTTCT GGGGTCGAGACTCATATCAAGTTGGCTGTTTCAATAATAATGATTATAAA GCAGCTCGTATGTGGAAAAATGACTTCCTTGATGAAAACTTGCCTAACAA TAAAACTATTCTTGGTGTTTTTGAAGGATCCAATCTTAATGTTTTCAGAG CTTTGGATAGTGAACTTCATACTTGGTATGAGTTTGAGAATTGTGTTTCA GATGCCAAAACAAATAAAACCGGATGTCATTTTAAGAATTCACAAAGACT TGGTAATAGAGCTCAGTTAGCTCaagttttctttgattttaataATTCGA AAAAACCATAGACATATTATCAGCATTAGAAATATGTATTTTAGGCCTGG CGGAAGcagggagactggggagacttcagcttccccacttttgagcaaat gagatttttttctcaaattcctagcaaattttatctcattttgagccttc agcctccccactttaagGTCGTTCCGCCGGACctgtattttgaatattta gcATATTTTCTTAAGTAGATATGAGTTTTCAATTATCATTGTATTCCTCA GggaaattaatgcgtgtccaaatttcaAACATGTTATTAGGCcacttatg atgacgtcataaaacaaGAGAATTAAATATCTTGAGAACTACTCagtaaa actttatgaaatttttacCAATGATATCAAAAGGAGTATTGGGCTCTcca gaaaaaagttttacatgggggttggaggatataacaaattttagtgattt accccccggacagggtgacttttggccccccggacagTAGGtcttacccc cgga

Coding sequence (CDS) from alignment at scaffold_49:546658..558011+

>TCONS_00068795 ID=TCONS_00068795|Name=TCONS_00068795|organism=Clytia hemisphaerica|type=CDS|length=15183bp|location=Sequence derived from alignment at scaffold_49:546658..558011+ (Clytia hemisphaerica)
atGAATCGAAGTATGAATAACAAAAATCCAAAGATATTTGTCTATCTGAT
ATCAGGCTTTCTTTTGGGGCTGGTTATACGTCTCAAATTTTCATCGTCAT
ATCAAGCACTTTCGAAATGTCACGATAAAGTTATTTTGGATCAAAAAGAA
CAATCTAAATCTGGTCGAAGCATAAATATAGAAAAGCCAGTAACAGTAAA
GGCAAAACCAAATCGATTTAACAATGACTACAGGCCTTATTTTGTATACA
GTGAGCTTGGTTTCAAAAATCTAATGTTTGTTGGTGTCAAAATAAGTGAA
CAACAACTTATGACCAATGGTGTGACCATTAATAACACGTGGTCTTCAGA
TGATCAGACTGTTGTTTTCTTCACACCATACTCAAGAGACAGTGAATTTC
ATAACCGATTTGTGAAGAAATTAAACCTTAACGTCATTCAATTACCAGAT
ATTGTGGACACGTCGAGTGATTTGGAATTTTCATTGCGTATTGTACAATA
TATGAAAGATCACCATTTGAATAAATATAACTGGTTTATTTTGAGTAATG
TTAATGTTTATTTGAATATAGTTAATGCTGGAGATCATTTAAAACGGTTG
AATTCGACACAACCAATCATACTGGCAAATAAAATTAAAGGAGAATGCTC
TTCAAGCCATGGCGTTATAATGAGTCATACAGCTCTTTCAAACTATTACC
AAACTGATGGAGCGGGTTTTCCTTCTGGGTTGTTATCAAAACTGGGAAAT
AAGGAAACACTTTTTTGCAATTCCGAACGATTTCTTAATATCCAAAGCAG
CAATATGCAACGAGTTTTAGGAGATGGAAACACCCTAAATGTTATCTCTA
TTGCTCCTCTCAAATCAAACACGGATATGTTGAAATTACACAAAACTATC
GTTCAAGAACGTTTAAAGGAAACTTTAAAAACTTCACGTAACTTACAAGC
TTCGATCAAAGAATTTCATGATAGAGTGCCGAACGATGTGTTGGAGAAGA
AATTAACATGGCCACTAGGCTATCCGCGACCATTCCGACCATCATCAAGA
TTTGAAGTTATTCAATGGACattatttgataaaaacaaGATGTATGCTTT
CACTGATCAAGAGCCAACCTCATCTTTCCCTGCTTCATATTATGGTGATT
TTACAGAGATTCTACAAACAGTAAAACAAGCTATCAATCAAAAATATGGA
AATCGTAGATTGGAATTGTTAAATGGATATCACAGAGTTGATCCGAAAAG
AGGTGCAGAATATCTGATTGAAATGAAGGACAAATCGTCAGATAAAGTGT
ATCGTTATCAGTTACTTCGACCTTTCTCCAGAGTTGAATCACTTTCAATG
CCAGCTGCTACAGAACAGAAAGGAATACACATTGTACTACCGTTACTAAA
GGATGacatgaaatattttgaaaagttcaTGCAAATGTACAAAAGACTTT
GTTTACAATCTGGAGAAAATGTTGTTCTTCTAACTGTCTTTGTCAATATT
CGTGATGGGaagtttgaagaagaaaaagaaccgTTTCTAGAATTCAAAAA
TCTGATTTCAAGATACAAGCAATCATACATGTGGGCTCAATTACCATGGT
TACAAGTTGGTGTTAAACACATTTCTGATGTCTTGGTGATGGACATTGTG
TCAATGAAACTACCTTCAAACGCTCTTATACTCTTGCTCTCACATCATAA
TCATTTCACTGTCAATTTTTTAAACAGATGTCGTGTTAACGTAGTGACTG
GATTGCAGgtCTTTTTCCCCATTCCTTTCTTGGAATACAATCCAGACATT
GTTTACAATGGCAAGCAGAAACCAGCATTTTCAGAAGTACACACCACAAC
CGGGTTCTGGGGTCGAGACTCATATCAAGTTGGCTGTTTCAATAATAATG
ATTATAAAGCAGCTCGTATGTGGAAAAATGACTTCCTTGATGAAAACTTG
CCTAACAATAAAACTATTCTTGGTGTTTTTGAAGGATCCAATCTTAATGT
TTTCAGAGCTTTGGATAGTGAACTTCATACTTGGTATGAGTTTGAGAATT
GTGTTTCAGATGCCAAAACAAATAAAACCGGATGTCATTTTAAGAATTCA
CAAAGACTTGGTAATAGAGCTCAGTTAGCTCaagttttctttgattttaa
taATTCGAAAAAACCATAGatGAATCGAAGTATGAATAACAAAAATCCAA
AGATATTTGTCTATCTGATATCAGGCTTTCTTTTGGGGCTGGTTATACGT
CTCAAATTTTCATCGTCATATCAAGCACTTTCGAAATGTCACGATAAAGT
TATTTTGGATCAAAAAGAACAATCTAAATCTGGTCGAAGCATAAATATAG
AAAAGCCAGTAACAGTAAAGGCAAAACCAAATCGATTTAACAATGACTAC
AGGCCTTATTTTGTATACAGTGAGCTTGGTTTCAAAAATCTAATGTTTGT
TGGTGTCAAAATAAGTGAACAACAACTTATGACCAATGGTGTGACCATTA
ATAACACGTGGTCTTCAGATGATCAGACTGTTGTTTTCTTCACACCATAC
TCAAGAGACAGTGAATTTCATAACCGATTTGTGAAGAAATTAAACCTTAA
CGTCATTCAATTACCAGATATTGTGGACACGTCGAGTGATTTGGAATTTT
CATTGCGTATTGTACAATATATGAAAGATCACCATTTGAATAAATATAAC
TGGTTTATTTTGAGTAATGTTAATGTTTATTTGAATATAGTTAATGCTGG
AGATCATTTAAAACGGTTGAATTCGACACAACCAATCATACTGGCAAATA
AAATTAAAGGAGAATGCTCTTCAAGCCATGGCGTTATAATGAGTCATACA
GCTCTTTCAAACTATTACCAAACTGATGGAGCGGGTTTTCCTTCTGGGTT
GTTATCAAAACTGGGAAATAAGGAAACACTTTTTTGCAATTCCGAACGAT
TTCTTAATATCCAAAGCAGCAATATGCAACGAGTTTTAGGAGATGGAAAC
ACCCTAAATGTTATCTCTATTGCTCCTCTCAAATCAAACACGGATATGTT
GAAATTACACAAAACTATCGTTCAAGAACGTTTAAAGGAAACTTTAAAAA
CTTCACGTAACTTACAAGCTTCGATCAAAGAATTTCATGATAGAGTGCCG
AACGATGTGTTGGAGAAGAAATTAACATGGCCACTAGGCTATCCGCGACC
ATTCCGACCATCATCAAGATTTGAAGTTATTCAATGGACattatttgata
aaaacaaGATGTATGCTTTCACTGATCAAGAGCCAACCTCATCTTTCCCT
GCTTCATATTATGGTGATTTTACAGAGATTCTACAAACAGTAAAACAAGC
TATCAATCAAAAATATGGAAATCGTAGATTGGAATTGTTAAATGGATATC
ACAGAGTTGATCCGAAAAGAGGTGCAGAATATCTGATTGAAATGAAGGAC
AAATCGTCAGATAAAGTGTATCGTTATCAGTTACTTCGACCTTTCTCCAG
AGTTGAATCACTTTCAATGCCAGCTGCTACAGAACAGAAAGGAATACACA
TTGTACTACCGTTACTAAAGGATGacatgaaatattttgaaaagttcaTG
CAAATGTACAAAAGACTTTGTTTACAATCTGGAGAAAATGTTGTTCTTCT
AACTGTCTTTGTCAATATTCGTGATGGGaagtttgaagaagaaaaagaac
cgTTTCTAGAATTCAAAAATCTGATTTCAAGATACAAGCAATCATACATG
TGGGCTCAATTACCATGGTTACAAGTTGGTGTTAAACACATTTCTGATGT
CTTGGTGATGGACATTGTGTCAATGAAACTACCTTCAAACGCTCTTATAC
TCTTGCTCTCACATCATAATCATTTCACTGTCAATTTTTTAAACAGATGT
CGTGTTAACGTAGTGACTGGATTGCAGgtCTTTTTCCCCATTCCTTTCTT
GGAATACAATCCAGACATTGTTTACAATGGCAAGCAGAAACCAGCATTTT
CAGAAGTACACACCACAACCGGGTTCTGGGGTCGAGACTCATATCAAGTT
GGCTGTTTCAATAATAATGATTATAAAGCAGCTCGTATGTGGAAAAATGA
CTTCCTTGATGAAAACTTGCCTAACAATAAAACTATTCTTGGTGTTTTTG
AAGGATCCAATCTTAATGTTTTCAGAGCTTTGGATAGTGAACTTCATACT
TGGTATGAGTTTGAGAATTGTGTTTCAGATGCCAAAACAAATAAAACCGG
ATGTCATTTTAAGAATTCACAAAGACTTGGTAATAGAGCTCAGTTAGCTC
aagttttctttgattttaataATTCGAAAAAACCATAGatGAATCGAAGT
ATGAATAACAAAAATCCAAAGATATTTGTCTATCTGATATCAGGCTTTCT
TTTGGGGCTGGTTATACGTCTCAAATTTTCATCGTCATATCAAGCACTTT
CGAAATGTCACGATAAAGTTATTTTGGATCAAAAAGAACAATCTAAATCT
GGTCGAAGCATAAATATAGAAAAGCCAGTAACAGTAAAGGCAAAACCAAA
TCGATTTAACAATGACTACAGGCCTTATTTTGTATACAGTGAGCTTGGTT
TCAAAAATCTAATGTTTGTTGGTGTCAAAATAAGTGAACAACAACTTATG
ACCAATGGTGTGACCATTAATAACACGTGGTCTTCAGATGATCAGACTGT
TGTTTTCTTCACACCATACTCAAGAGACAGTGAATTTCATAACCGATTTG
TGAAGAAATTAAACCTTAACGTCATTCAATTACCAGATATTGTGGACACG
TCGAGTGATTTGGAATTTTCATTGCGTATTGTACAATATATGAAAGATCA
CCATTTGAATAAATATAACTGGTTTATTTTGAGTAATGTTAATGTTTATT
TGAATATAGTTAATGCTGGAGATCATTTAAAACGGTTGAATTCGACACAA
CCAATCATACTGGCAAATAAAATTAAAGGAGAATGCTCTTCAAGCCATGG
CGTTATAATGAGTCATACAGCTCTTTCAAACTATTACCAAACTGATGGAG
CGGGTTTTCCTTCTGGGTTGTTATCAAAACTGGGAAATAAGGAAACACTT
TTTTGCAATTCCGAACGATTTCTTAATATCCAAAGCAGCAATATGCAACG
AGTTTTAGGAGATGGAAACACCCTAAATGTTATCTCTATTGCTCCTCTCA
AATCAAACACGGATATGTTGAAATTACACAAAACTATCGTTCAAGAACGT
TTAAAGGAAACTTTAAAAACTTCACGTAACTTACAAGCTTCGATCAAAGA
ATTTCATGATAGAGTGCCGAACGATGTGTTGGAGAAGAAATTAACATGGC
CACTAGGCTATCCGCGACCATTCCGACCATCATCAAGATTTGAAGTTATT
CAATGGACattatttgataaaaacaaGATGTATGCTTTCACTGATCAAGA
GCCAACCTCATCTTTCCCTGCTTCATATTATGGTGATTTTACAGAGATTC
TACAAACAGTAAAACAAGCTATCAATCAAAAATATGGAAATCGTAGATTG
GAATTGTTAAATGGATATCACAGAGTTGATCCGAAAAGAGGTGCAGAATA
TCTGATTGAAATGAAGGACAAATCGTCAGATAAAGTGTATCGTTATCAGT
TACTTCGACCTTTCTCCAGAGTTGAATCACTTTCAATGCCAGCTGCTACA
GAACAGAAAGGAATACACATTGTACTACCGTTACTAAAGGATGacatgaa
atattttgaaaagttcaTGCAAATGTACAAAAGACTTTGTTTACAATCTG
GAGAAAATGTTGTTCTTCTAACTGTCTTTGTCAATATTCGTGATGGGaag
tttgaagaagaaaaagaaccgTTTCTAGAATTCAAAAATCTGATTTCAAG
ATACAAGCAATCATACATGTGGGCTCAATTACCATGGTTACAAGTTGGTG
TTAAACACATTTCTGATGTCTTGGTGATGGACATTGTGTCAATGAAACTA
CCTTCAAACGCTCTTATACTCTTGCTCTCACATCATAATCATTTCACTGT
CAATTTTTTAAACAGATGTCGTGTTAACGTAGTGACTGGATTGCAGgtCT
TTTTCCCCATTCCTTTCTTGGAATACAATCCAGACATTGTTTACAATGGC
AAGCAGAAACCAGCATTTTCAGAAGTACACACCACAACCGGGTTCTGGGG
TCGAGACTCATATCAAGTTGGCTGTTTCAATAATAATGATTATAAAGCAG
CTCGTATGTGGAAAAATGACTTCCTTGATGAAAACTTGCCTAACAATAAA
ACTATTCTTGGTGTTTTTGAAGGATCCAATCTTAATGTTTTCAGAGCTTT
GGATAGTGAACTTCATACTTGGTATGAGTTTGAGAATTGTGTTTCAGATG
CCAAAACAAATAAAACCGGATGTCATTTTAAGAATTCACAAAGACTTGGT
AATAGAGCTCAGTTAGCTCaagttttctttgattttaataATTCGAAAAA
ACCATAGatGAATCGAAGTATGAATAACAAAAATCCAAAGATATTTGTCT
ATCTGATATCAGGCTTTCTTTTGGGGCTGGTTATACGTCTCAAATTTTCA
TCGTCATATCAAGCACTTTCGAAATGTCACGATAAAGTTATTTTGGATCA
AAAAGAACAATCTAAATCTGGTCGAAGCATAAATATAGAAAAGCCAGTAA
CAGTAAAGGCAAAACCAAATCGATTTAACAATGACTACAGGCCTTATTTT
GTATACAGTGAGCTTGGTTTCAAAAATCTAATGTTTGTTGGTGTCAAAAT
AAGTGAACAACAACTTATGACCAATGGTGTGACCATTAATAACACGTGGT
CTTCAGATGATCAGACTGTTGTTTTCTTCACACCATACTCAAGAGACAGT
GAATTTCATAACCGATTTGTGAAGAAATTAAACCTTAACGTCATTCAATT
ACCAGATATTGTGGACACGTCGAGTGATTTGGAATTTTCATTGCGTATTG
TACAATATATGAAAGATCACCATTTGAATAAATATAACTGGTTTATTTTG
AGTAATGTTAATGTTTATTTGAATATAGTTAATGCTGGAGATCATTTAAA
ACGGTTGAATTCGACACAACCAATCATACTGGCAAATAAAATTAAAGGAG
AATGCTCTTCAAGCCATGGCGTTATAATGAGTCATACAGCTCTTTCAAAC
TATTACCAAACTGATGGAGCGGGTTTTCCTTCTGGGTTGTTATCAAAACT
GGGAAATAAGGAAACACTTTTTTGCAATTCCGAACGATTTCTTAATATCC
AAAGCAGCAATATGCAACGAGTTTTAGGAGATGGAAACACCCTAAATGTT
ATCTCTATTGCTCCTCTCAAATCAAACACGGATATGTTGAAATTACACAA
AACTATCGTTCAAGAACGTTTAAAGGAAACTTTAAAAACTTCACGTAACT
TACAAGCTTCGATCAAAGAATTTCATGATAGAGTGCCGAACGATGTGTTG
GAGAAGAAATTAACATGGCCACTAGGCTATCCGCGACCATTCCGACCATC
ATCAAGATTTGAAGTTATTCAATGGACattatttgataaaaacaaGATGT
ATGCTTTCACTGATCAAGAGCCAACCTCATCTTTCCCTGCTTCATATTAT
GGTGATTTTACAGAGATTCTACAAACAGTAAAACAAGCTATCAATCAAAA
ATATGGAAATCGTAGATTGGAATTGTTAAATGGATATCACAGAGTTGATC
CGAAAAGAGGTGCAGAATATCTGATTGAAATGAAGGACAAATCGTCAGAT
AAAGTGTATCGTTATCAGTTACTTCGACCTTTCTCCAGAGTTGAATCACT
TTCAATGCCAGCTGCTACAGAACAGAAAGGAATACACATTGTACTACCGT
TACTAAAGGATGacatgaaatattttgaaaagttcaTGCAAATGTACAAA
AGACTTTGTTTACAATCTGGAGAAAATGTTGTTCTTCTAACTGTCTTTGT
CAATATTCGTGATGGGaagtttgaagaagaaaaagaaccgTTTCTAGAAT
TCAAAAATCTGATTTCAAGATACAAGCAATCATACATGTGGGCTCAATTA
CCATGGTTACAAGTTGGTGTTAAACACATTTCTGATGTCTTGGTGATGGA
CATTGTGTCAATGAAACTACCTTCAAACGCTCTTATACTCTTGCTCTCAC
ATCATAATCATTTCACTGTCAATTTTTTAAACAGATGTCGTGTTAACGTA
GTGACTGGATTGCAGgtCTTTTTCCCCATTCCTTTCTTGGAATACAATCC
AGACATTGTTTACAATGGCAAGCAGAAACCAGCATTTTCAGAAGTACACA
CCACAACCGGGTTCTGGGGTCGAGACTCATATCAAGTTGGCTGTTTCAAT
AATAATGATTATAAAGCAGCTCGTATGTGGAAAAATGACTTCCTTGATGA
AAACTTGCCTAACAATAAAACTATTCTTGGTGTTTTTGAAGGATCCAATC
TTAATGTTTTCAGAGCTTTGGATAGTGAACTTCATACTTGGTATGAGTTT
GAGAATTGTGTTTCAGATGCCAAAACAAATAAAACCGGATGTCATTTTAA
GAATTCACAAAGACTTGGTAATAGAGCTCAGTTAGCTCaagttttctttg
attttaataATTCGAAAAAACCATAGatGAATCGAAGTATGAATAACAAA
AATCCAAAGATATTTGTCTATCTGATATCAGGCTTTCTTTTGGGGCTGGT
TATACGTCTCAAATTTTCATCGTCATATCAAGCACTTTCGAAATGTCACG
ATAAAGTTATTTTGGATCAAAAAGAACAATCTAAATCTGGTCGAAGCATA
AATATAGAAAAGCCAGTAACAGTAAAGGCAAAACCAAATCGATTTAACAA
TGACTACAGGCCTTATTTTGTATACAGTGAGCTTGGTTTCAAAAATCTAA
TGTTTGTTGGTGTCAAAATAAGTGAACAACAACTTATGACCAATGGTGTG
ACCATTAATAACACGTGGTCTTCAGATGATCAGACTGTTGTTTTCTTCAC
ACCATACTCAAGAGACAGTGAATTTCATAACCGATTTGTGAAGAAATTAA
ACCTTAACGTCATTCAATTACCAGATATTGTGGACACGTCGAGTGATTTG
GAATTTTCATTGCGTATTGTACAATATATGAAAGATCACCATTTGAATAA
ATATAACTGGTTTATTTTGAGTAATGTTAATGTTTATTTGAATATAGTTA
ATGCTGGAGATCATTTAAAACGGTTGAATTCGACACAACCAATCATACTG
GCAAATAAAATTAAAGGAGAATGCTCTTCAAGCCATGGCGTTATAATGAG
TCATACAGCTCTTTCAAACTATTACCAAACTGATGGAGCGGGTTTTCCTT
CTGGGTTGTTATCAAAACTGGGAAATAAGGAAACACTTTTTTGCAATTCC
GAACGATTTCTTAATATCCAAAGCAGCAATATGCAACGAGTTTTAGGAGA
TGGAAACACCCTAAATGTTATCTCTATTGCTCCTCTCAAATCAAACACGG
ATATGTTGAAATTACACAAAACTATCGTTCAAGAACGTTTAAAGGAAACT
TTAAAAACTTCACGTAACTTACAAGCTTCGATCAAAGAATTTCATGATAG
AGTGCCGAACGATGTGTTGGAGAAGAAATTAACATGGCCACTAGGCTATC
CGCGACCATTCCGACCATCATCAAGATTTGAAGTTATTCAATGGACatta
tttgataaaaacaaGATGTATGCTTTCACTGATCAAGAGCCAACCTCATC
TTTCCCTGCTTCATATTATGGTGATTTTACAGAGATTCTACAAACAGTAA
AACAAGCTATCAATCAAAAATATGGAAATCGTAGATTGGAATTGTTAAAT
GGATATCACAGAGTTGATCCGAAAAGAGGTGCAGAATATCTGATTGAAAT
GAAGGACAAATCGTCAGATAAAGTGTATCGTTATCAGTTACTTCGACCTT
TCTCCAGAGTTGAATCACTTTCAATGCCAGCTGCTACAGAACAGAAAGGA
ATACACATTGTACTACCGTTACTAAAGGATGacatgaaatattttgaaaa
gttcaTGCAAATGTACAAAAGACTTTGTTTACAATCTGGAGAAAATGTTG
TTCTTCTAACTGTCTTTGTCAATATTCGTGATGGGaagtttgaagaagaa
aaagaaccgTTTCTAGAATTCAAAAATCTGATTTCAAGATACAAGCAATC
ATACATGTGGGCTCAATTACCATGGTTACAAGTTGGTGTTAAACACATTT
CTGATGTCTTGGTGATGGACATTGTGTCAATGAAACTACCTTCAAACGCT
CTTATACTCTTGCTCTCACATCATAATCATTTCACTGTCAATTTTTTAAA
CAGATGTCGTGTTAACGTAGTGACTGGATTGCAGgtCTTTTTCCCCATTC
CTTTCTTGGAATACAATCCAGACATTGTTTACAATGGCAAGCAGAAACCA
GCATTTTCAGAAGTACACACCACAACCGGGTTCTGGGGTCGAGACTCATA
TCAAGTTGGCTGTTTCAATAATAATGATTATAAAGCAGCTCGTATGTGGA
AAAATGACTTCCTTGATGAAAACTTGCCTAACAATAAAACTATTCTTGGT
GTTTTTGAAGGATCCAATCTTAATGTTTTCAGAGCTTTGGATAGTGAACT
TCATACTTGGTATGAGTTTGAGAATTGTGTTTCAGATGCCAAAACAAATA
AAACCGGATGTCATTTTAAGAATTCACAAAGACTTGGTAATAGAGCTCAG
TTAGCTCaagttttctttgattttaataATTCGAAAAAACCATAGatGAA
TCGAAGTATGAATAACAAAAATCCAAAGATATTTGTCTATCTGATATCAG
GCTTTCTTTTGGGGCTGGTTATACGTCTCAAATTTTCATCGTCATATCAA
GCACTTTCGAAATGTCACGATAAAGTTATTTTGGATCAAAAAGAACAATC
TAAATCTGGTCGAAGCATAAATATAGAAAAGCCAGTAACAGTAAAGGCAA
AACCAAATCGATTTAACAATGACTACAGGCCTTATTTTGTATACAGTGAG
CTTGGTTTCAAAAATCTAATGTTTGTTGGTGTCAAAATAAGTGAACAACA
ACTTATGACCAATGGTGTGACCATTAATAACACGTGGTCTTCAGATGATC
AGACTGTTGTTTTCTTCACACCATACTCAAGAGACAGTGAATTTCATAAC
CGATTTGTGAAGAAATTAAACCTTAACGTCATTCAATTACCAGATATTGT
GGACACGTCGAGTGATTTGGAATTTTCATTGCGTATTGTACAATATATGA
AAGATCACCATTTGAATAAATATAACTGGTTTATTTTGAGTAATGTTAAT
GTTTATTTGAATATAGTTAATGCTGGAGATCATTTAAAACGGTTGAATTC
GACACAACCAATCATACTGGCAAATAAAATTAAAGGAGAATGCTCTTCAA
GCCATGGCGTTATAATGAGTCATACAGCTCTTTCAAACTATTACCAAACT
GATGGAGCGGGTTTTCCTTCTGGGTTGTTATCAAAACTGGGAAATAAGGA
AACACTTTTTTGCAATTCCGAACGATTTCTTAATATCCAAAGCAGCAATA
TGCAACGAGTTTTAGGAGATGGAAACACCCTAAATGTTATCTCTATTGCT
CCTCTCAAATCAAACACGGATATGTTGAAATTACACAAAACTATCGTTCA
AGAACGTTTAAAGGAAACTTTAAAAACTTCACGTAACTTACAAGCTTCGA
TCAAAGAATTTCATGATAGAGTGCCGAACGATGTGTTGGAGAAGAAATTA
ACATGGCCACTAGGCTATCCGCGACCATTCCGACCATCATCAAGATTTGA
AGTTATTCAATGGACattatttgataaaaacaaGATGTATGCTTTCACTG
ATCAAGAGCCAACCTCATCTTTCCCTGCTTCATATTATGGTGATTTTACA
GAGATTCTACAAACAGTAAAACAAGCTATCAATCAAAAATATGGAAATCG
TAGATTGGAATTGTTAAATGGATATCACAGAGTTGATCCGAAAAGAGGTG
CAGAATATCTGATTGAAATGAAGGACAAATCGTCAGATAAAGTGTATCGT
TATCAGTTACTTCGACCTTTCTCCAGAGTTGAATCACTTTCAATGCCAGC
TGCTACAGAACAGAAAGGAATACACATTGTACTACCGTTACTAAAGGATG
acatgaaatattttgaaaagttcaTGCAAATGTACAAAAGACTTTGTTTA
CAATCTGGAGAAAATGTTGTTCTTCTAACTGTCTTTGTCAATATTCGTGA
TGGGaagtttgaagaagaaaaagaaccgTTTCTAGAATTCAAAAATCTGA
TTTCAAGATACAAGCAATCATACATGTGGGCTCAATTACCATGGTTACAA
GTTGGTGTTAAACACATTTCTGATGTCTTGGTGATGGACATTGTGTCAAT
GAAACTACCTTCAAACGCTCTTATACTCTTGCTCTCACATCATAATCATT
TCACTGTCAATTTTTTAAACAGATGTCGTGTTAACGTAGTGACTGGATTG
CAGgtCTTTTTCCCCATTCCTTTCTTGGAATACAATCCAGACATTGTTTA
CAATGGCAAGCAGAAACCAGCATTTTCAGAAGTACACACCACAACCGGGT
TCTGGGGTCGAGACTCATATCAAGTTGGCTGTTTCAATAATAATGATTAT
AAAGCAGCTCGTATGTGGAAAAATGACTTCCTTGATGAAAACTTGCCTAA
CAATAAAACTATTCTTGGTGTTTTTGAAGGATCCAATCTTAATGTTTTCA
GAGCTTTGGATAGTGAACTTCATACTTGGTATGAGTTTGAGAATTGTGTT
TCAGATGCCAAAACAAATAAAACCGGATGTCATTTTAAGAATTCACAAAG
ACTTGGTAATAGAGCTCAGTTAGCTCaagttttctttgattttaataATT
CGAAAAAACCATAGatGAATCGAAGTATGAATAACAAAAATCCAAAGATA
TTTGTCTATCTGATATCAGGCTTTCTTTTGGGGCTGGTTATACGTCTCAA
ATTTTCATCGTCATATCAAGCACTTTCGAAATGTCACGATAAAGTTATTT
TGGATCAAAAAGAACAATCTAAATCTGGTCGAAGCATAAATATAGAAAAG
CCAGTAACAGTAAAGGCAAAACCAAATCGATTTAACAATGACTACAGGCC
TTATTTTGTATACAGTGAGCTTGGTTTCAAAAATCTAATGTTTGTTGGTG
TCAAAATAAGTGAACAACAACTTATGACCAATGGTGTGACCATTAATAAC
ACGTGGTCTTCAGATGATCAGACTGTTGTTTTCTTCACACCATACTCAAG
AGACAGTGAATTTCATAACCGATTTGTGAAGAAATTAAACCTTAACGTCA
TTCAATTACCAGATATTGTGGACACGTCGAGTGATTTGGAATTTTCATTG
CGTATTGTACAATATATGAAAGATCACCATTTGAATAAATATAACTGGTT
TATTTTGAGTAATGTTAATGTTTATTTGAATATAGTTAATGCTGGAGATC
ATTTAAAACGGTTGAATTCGACACAACCAATCATACTGGCAAATAAAATT
AAAGGAGAATGCTCTTCAAGCCATGGCGTTATAATGAGTCATACAGCTCT
TTCAAACTATTACCAAACTGATGGAGCGGGTTTTCCTTCTGGGTTGTTAT
CAAAACTGGGAAATAAGGAAACACTTTTTTGCAATTCCGAACGATTTCTT
AATATCCAAAGCAGCAATATGCAACGAGTTTTAGGAGATGGAAACACCCT
AAATGTTATCTCTATTGCTCCTCTCAAATCAAACACGGATATGTTGAAAT
TACACAAAACTATCGTTCAAGAACGTTTAAAGGAAACTTTAAAAACTTCA
CGTAACTTACAAGCTTCGATCAAAGAATTTCATGATAGAGTGCCGAACGA
TGTGTTGGAGAAGAAATTAACATGGCCACTAGGCTATCCGCGACCATTCC
GACCATCATCAAGATTTGAAGTTATTCAATGGACattatttgataaaaac
aaGATGTATGCTTTCACTGATCAAGAGCCAACCTCATCTTTCCCTGCTTC
ATATTATGGTGATTTTACAGAGATTCTACAAACAGTAAAACAAGCTATCA
ATCAAAAATATGGAAATCGTAGATTGGAATTGTTAAATGGATATCACAGA
GTTGATCCGAAAAGAGGTGCAGAATATCTGATTGAAATGAAGGACAAATC
GTCAGATAAAGTGTATCGTTATCAGTTACTTCGACCTTTCTCCAGAGTTG
AATCACTTTCAATGCCAGCTGCTACAGAACAGAAAGGAATACACATTGTA
CTACCGTTACTAAAGGATGacatgaaatattttgaaaagttcaTGCAAAT
GTACAAAAGACTTTGTTTACAATCTGGAGAAAATGTTGTTCTTCTAACTG
TCTTTGTCAATATTCGTGATGGGaagtttgaagaagaaaaagaaccgTTT
CTAGAATTCAAAAATCTGATTTCAAGATACAAGCAATCATACATGTGGGC
TCAATTACCATGGTTACAAGTTGGTGTTAAACACATTTCTGATGTCTTGG
TGATGGACATTGTGTCAATGAAACTACCTTCAAACGCTCTTATACTCTTG
CTCTCACATCATAATCATTTCACTGTCAATTTTTTAAACAGATGTCGTGT
TAACGTAGTGACTGGATTGCAGgtCTTTTTCCCCATTCCTTTCTTGGAAT
ACAATCCAGACATTGTTTACAATGGCAAGCAGAAACCAGCATTTTCAGAA
GTACACACCACAACCGGGTTCTGGGGTCGAGACTCATATCAAGTTGGCTG
TTTCAATAATAATGATTATAAAGCAGCTCGTATGTGGAAAAATGACTTCC
TTGATGAAAACTTGCCTAACAATAAAACTATTCTTGGTGTTTTTGAAGGA
TCCAATCTTAATGTTTTCAGAGCTTTGGATAGTGAACTTCATACTTGGTA
TGAGTTTGAGAATTGTGTTTCAGATGCCAAAACAAATAAAACCGGATGTC
ATTTTAAGAATTCACAAAGACTTGGTAATAGAGCTCAGTTAGCTCaagtt
ttctttgattttaataATTCGAAAAAACCATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042898XLOC_042898Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068795-proteinTCONS_00068795-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068795-exon-scaffold_49-1491911889:546658..546754TCONS_00068795-exon-scaffold_49-1491911889:546658..546754Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1510915933:546658..546754TCONS_00068795-exon-scaffold_49-1510915933:546658..546754Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1575043694:546658..546754TCONS_00068795-exon-scaffold_49-1575043694:546658..546754Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1491911889:551074..551857TCONS_00068795-exon-scaffold_49-1491911889:551074..551857Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1510915933:551074..551857TCONS_00068795-exon-scaffold_49-1510915933:551074..551857Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1575043694:551074..551857TCONS_00068795-exon-scaffold_49-1575043694:551074..551857Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1491911889:552180..552396TCONS_00068795-exon-scaffold_49-1491911889:552180..552396Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1510915933:552180..552396TCONS_00068795-exon-scaffold_49-1510915933:552180..552396Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1575043694:552180..552396TCONS_00068795-exon-scaffold_49-1575043694:552180..552396Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1491911889:553451..553717TCONS_00068795-exon-scaffold_49-1491911889:553451..553717Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1510915933:553451..553717TCONS_00068795-exon-scaffold_49-1510915933:553451..553717Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1575043694:553451..553717TCONS_00068795-exon-scaffold_49-1575043694:553451..553717Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1491911889:555425..555572TCONS_00068795-exon-scaffold_49-1491911889:555425..555572Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1510915933:555425..555572TCONS_00068795-exon-scaffold_49-1510915933:555425..555572Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1575043694:555425..555572TCONS_00068795-exon-scaffold_49-1575043694:555425..555572Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1491911889:556081..556242TCONS_00068795-exon-scaffold_49-1491911889:556081..556242Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1510915933:556081..556242TCONS_00068795-exon-scaffold_49-1510915933:556081..556242Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1575043694:556081..556242TCONS_00068795-exon-scaffold_49-1575043694:556081..556242Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1491911889:556458..556653TCONS_00068795-exon-scaffold_49-1491911889:556458..556653Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1510915933:556458..556653TCONS_00068795-exon-scaffold_49-1510915933:556458..556653Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1575043694:556458..556653TCONS_00068795-exon-scaffold_49-1575043694:556458..556653Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1491911889:557108..558011TCONS_00068795-exon-scaffold_49-1491911889:557108..558011Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1510915933:557108..558011TCONS_00068795-exon-scaffold_49-1510915933:557108..558011Clytia hemisphaericaexon
TCONS_00068795-exon-scaffold_49-1575043694:557108..558011TCONS_00068795-exon-scaffold_49-1575043694:557108..558011Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:546658..558011 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.155599 0.00195677 0 4.61665 3.20747 11.2786 8.66885 1.86859 3.26635 3.08775 2.50866 1.69023 1.09962 1.60635 2.10063 1.39193 1.29958 0.49166 0 2.15718 1.88981 0.889379 0.673841 1.65999 2.62318 0.00294647 1.43898e-09 0.884264 1.17265e-06
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR008428Chond_GalNAc
Vocabulary: Molecular Function
TermDefinition
GO:0008376acetylgalactosaminyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0032580Golgi cisterna membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0032580 Golgi cisterna membrane
molecular_function GO:0008376 acetylgalactosaminyltransferase activity
Blast
BLAST of TCONS_00068795 vs. Swiss-Prot (Human)
Match: CHSS2 (Chondroitin sulfate synthase 2 OS=Homo sapiens GN=CHPF PE=1 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 5.532e-56
Identity = 176/682 (25.81%), Postives = 308/682 (45.16%), Query Frame = 3
Query:  345 RPYFVYSELGFKNLMFVGVKISEQQLMTNGVTINNTWSSDDQTVVFFTPYSRDSEFHNRFVKKLNLNVIQLPDIVDTSSDLEFSLRIVQYMKDHHLNKYNWFIL------------SNVNVYLNIVNAGDHLKRLNSTQPIILANKIKGE-CSSSHGVIMSHTALSNYY-QTDG------AGFPSGLLSK-LGNKETLFCNSER----FLNIQSSNMQRVL-GDGNTLNVISIAPLKSNTDMLKLHKTIVQERLKETLKTSRNLQASIKEF-HDRVPNDVLEKKLTWPLGYPRPFRPSSRFEVIQWTLFDKNKMYAFTDQEPTSSFPASYYGDFTEILQTVKQAINQKYGN----RRLELLNGYHRVDPKRGAEYLIEMKDKSSDK-------VYRYQLLRPFSRVESLSMPAATEQKGIHIVLPLLKDDMKYFEKFMQMYKRLCLQSGENVVLLTVFV--NIRDGXXXXXXXXXXXXXNLISRYKQSYMWAQLPWLQVGVKHISDVLVMDIVSMKLPSNALILLLSHHNHFTVNFLNRCRVNVVTGLQVFFPIPFLEYNPDIVYNGKQKPAFSEVHTTTGFWGRDSYQVGCFNNNDYKAA--RMWKNDFLDENLPNNKTILGVF-EGSNLNVFRALDSELHTWYEFENCVSDAKTN-KTGCHFKNSQRLGNRAQLAQVFFD 2258
            R  ++ +ELG +  + V V  S+  L T GV +N T     + VVF T  +R             + V+ L         +      ++++ + H + ++WF L            + +  +L++ +A  HL  L   Q  I      G  C    GV++S   L       +G      +  P   L + + +   + C  +     + +++ S  + V  GD +  + ++  P++    M +LHK   +  L+ T +  + LQ  I+   H  V  D   +   WP+G P P RP+SRFEV++W  F +   ++  D  P      +   D  ++L T  + +N++Y      ++ +L+NGY R DP RG EY ++++ ++            R QLLRP SRVE L +P  TE   + ++LPL   +      F++ +    L+ G+    LT+ +    R  +     + F   K  ++  ++ +  A++PWL V     S + +MD++S K P + L LL       T +FLNRCR++ ++G Q FFP+ F  ++P +     Q P   E+   TG + R +    CF N+DY AA  R+      +E L  +  +  +F   S+L+V RA++  L   Y  + C +    +    C     + LG+R QLA + F+
Sbjct:  105 RTRYISTELGIRQRLLVAVLTSQTTLPTLGVAVNRTLGHRLERVVFLT-GARGRR------APPGMAVVTL----GEERPIGHLHLALRHLLEQHGDDFDWFFLVPDTTYTEAHGLARLTGHLSLASAA-HLY-LGRPQDFIGGEPTPGRYCHGGFGVLLSRMLLQQLRPHLEGCRNDIVSARPDEWLGRCILDATGVGCTGDHEGVHYSHLELSPGEPVQEGDPHFRSALTAHPVRDPVHMYQLHKAFARAELERTYQEIQELQWEIQNTSHLAVDGD---QAAAWPVGIPAPSRPASRFEVLRWDYFTEQHAFSCADGSPRCPLRGADRADVADVLGTALEELNRRYHPALRLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAAAERDLAPGFLEAFATAALEPGDAAAALTLLLLYEPRQAQRVAHADVFAPVKAHVAELERRFPGARVPWLSVQTAAPSPLRLMDLLSKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPMHFQAFHPAVAP--PQGPGPPELGRDTGRFDRQAASEACFYNSDYVAARGRLAAASEQEEELLESLDVYELFLHFSSLHVLRAVEPALLQRYRAQTCSARLSEDLYHRCLQSVLEGLGSRTQLAMLLFE 768          
The following BLAST results are available for this feature:
BLAST of TCONS_00068795 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHSS25.532e-5625.81Chondroitin sulfate synthase 2 OS=Homo sapiens GN=... [more]
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