TCONS_00068795-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068795-protein
Unique NameTCONS_00068795-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length722

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068795-protein ID=TCONS_00068795-protein|Name=TCONS_00068795-protein|organism=Clytia hemisphaerica|type=polypeptide|length=722bp
MNRSMNNKNPKIFVYLISGFLLGLVIRLKFSSSYQALSKCHDKVILDQKE
QSKSGRSINIEKPVTVKAKPNRFNNDYRPYFVYSELGFKNLMFVGVKISE
QQLMTNGVTINNTWSSDDQTVVFFTPYSRDSEFHNRFVKKLNLNVIQLPD
IVDTSSDLEFSLRIVQYMKDHHLNKYNWFILSNVNVYLNIVNAGDHLKRL
NSTQPIILANKIKGECSSSHGVIMSHTALSNYYQTDGAGFPSGLLSKLGN
KETLFCNSERFLNIQSSNMQRVLGDGNTLNVISIAPLKSNTDMLKLHKTI
VQERLKETLKTSRNLQASIKEFHDRVPNDVLEKKLTWPLGYPRPFRPSSR
FEVIQWTLFDKNKMYAFTDQEPTSSFPASYYGDFTEILQTVKQAINQKYG
NRRLELLNGYHRVDPKRGAEYLIEMKDKSSDKVYRYQLLRPFSRVESLSM
PAATEQKGIHIVLPLLKDDMKYFEKFMQMYKRLCLQSGENVVLLTVFVNI
RDGKFEEEKEPFLEFKNLISRYKQSYMWAQLPWLQVGVKHISDVLVMDIV
SMKLPSNALILLLSHHNHFTVNFLNRCRVNVVTGLQVFFPIPFLEYNPDI
VYNGKQKPAFSEVHTTTGFWGRDSYQVGCFNNNDYKAARMWKNDFLDENL
PNNKTILGVFEGSNLNVFRALDSELHTWYEFENCVSDAKTNKTGCHFKNS
QRLGNRAQLAQVFFDFNNSKKP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042898XLOC_042898Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068795TCONS_00068795Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008428Chond_GalNAc
Vocabulary: Molecular Function
TermDefinition
GO:0008376acetylgalactosaminyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0032580Golgi cisterna membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0032580 Golgi cisterna membrane
molecular_function GO:0008376 acetylgalactosaminyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008428Chondroitin N-acetylgalactosaminyltransferasePFAMPF05679CHGNcoord: 274..709
e-value: 3.4E-90
score: 303.2

Blast
[Close]
BLAST of TCONS_00068795-protein vs. Swiss-Prot (Human)
Match: CHSS2 (Chondroitin sulfate synthase 2 OS=Homo sapiens GN=CHPF PE=1 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 8.180e-59
Identity = 176/682 (25.81%), Postives = 308/682 (45.16%), Query Frame = 0 
Query:   78 RPYFVYSELGFKNLMFVGVKISEQQLMTNGVTINNTWSSDDQTVVFFTPYSRDSEFHNRFVKKLNLNVIQLPDIVDTSSDLEFSLRIVQYMKDHHLNKYNWFIL------------SNVNVYLNIVNAGDHLKRLNSTQPIILANKIKGE-CSSSHGVIMSHTALSNYY-QTDG------AGFPSGLLSK-LGNKETLFCNSER----FLNIQSSNMQRVL-GDGNTLNVISIAPLKSNTDMLKLHKTIVQERLKETLKTSRNLQASIKEF-HDRVPNDVLEKKLTWPLGYPRPFRPSSRFEVIQWTLFDKNKMYAFTDQEPTSSFPASYYGDFTEILQTVKQAINQKYGN----RRLELLNGYHRVDPKRGAEYLIEMKDKSSDK-------VYRYQLLRPFSRVESLSMPAATEQKGIHIVLPLLKDDMKYFEKFMQMYKRLCLQSGENVVLLTVFV--NIRDGKFEEEKEPFLEFKNLISRYKQSYMWAQLPWLQVGVKHISDVLVMDIVSMKLPSNALILLLSHHNHFTVNFLNRCRVNVVTGLQVFFPIPFLEYNPDIVYNGKQKPAFSEVHTTTGFWGRDSYQVGCFNNNDYKAA--RMWKNDFLDENLPNNKTILGVF-EGSNLNVFRALDSELHTWYEFENCVSDAKTN-KTGCHFKNSQRLGNRAQLAQVFFD 715
            R  ++ +ELG +  + V V  S+  L T GV +N T     + VVF T  +R             + V+ L         +      ++++ + H + ++WF L            + +  +L++ +A  HL  L   Q  I      G  C    GV++S   L       +G      +  P   L + + +   + C  +     + +++ S  + V  GD +  + ++  P++    M +LHK   +  L+ T +  + LQ  I+   H  V  D   +   WP+G P P RP+SRFEV++W  F +   ++  D  P      +   D  ++L T  + +N++Y      ++ +L+NGY R DP RG EY ++++ ++            R QLLRP SRVE L +P  TE   + ++LPL   +      F++ +    L+ G+    LT+ +    R  +     + F   K  ++  ++ +  A++PWL V     S + +MD++S K P + L LL       T +FLNRCR++ ++G Q FFP+ F  ++P +     Q P   E+   TG + R +    CF N+DY AA  R+      +E L  +  +  +F   S+L+V RA++  L   Y  + C +    +    C     + LG+R QLA + F+
Sbjct:  105 RTRYISTELGIRQRLLVAVLTSQTTLPTLGVAVNRTLGHRLERVVFLT-GARGRR------APPGMAVVTL----GEERPIGHLHLALRHLLEQHGDDFDWFFLVPDTTYTEAHGLARLTGHLSLASAA-HLY-LGRPQDFIGGEPTPGRYCHGGFGVLLSRMLLQQLRPHLEGCRNDIVSARPDEWLGRCILDATGVGCTGDHEGVHYSHLELSPGEPVQEGDPHFRSALTAHPVRDPVHMYQLHKAFARAELERTYQEIQELQWEIQNTSHLAVDGD---QAAAWPVGIPAPSRPASRFEVLRWDYFTEQHAFSCADGSPRCPLRGADRADVADVLGTALEELNRRYHPALRLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAAAERDLAPGFLEAFATAALEPGDAAAALTLLLLYEPRQAQRVAHADVFAPVKAHVAELERRFPGARVPWLSVQTAAPSPLRLMDLLSKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPMHFQAFHPAVAP--PQGPGPPELGRDTGRFDRQAASEACFYNSDYVAARGRLAAASEQEEELLESLDVYELFLHFSSLHVLRAVEPALLQRYRAQTCSARLSEDLYHRCLQSVLEGLGSRTQLAMLLFE 768
The following BLAST results are available for this feature:
BLAST of TCONS_00068795-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHSS28.180e-5925.81Chondroitin sulfate synthase 2 OS=Homo sapiens GN=... [more]
back to top