TCONS_00068733 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068733
Unique NameTCONS_00068733
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length156

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068733 ID=TCONS_00068733|Name=TCONS_00068733|organism=Clytia hemisphaerica|type=transcript|length=156bp
CTTTTAATTTTATACTTTAATCAGAGatttaatttctcaaatttcgaggt
gttataattattttaaatgatctgtattaatgttttatttttcaaatgaa
gCCTTTCTTGTTCGAATATGTTGGTTAATATTTTGCGACTTGTGAAAGCC
ATTCTT
Run BLAST on NCBI

transcript from alignment at scaffold_489:8301..8456

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068733 ID=TCONS_00068733|Name=TCONS_00068733|organism=Clytia hemisphaerica|type=transcript|length=156bp|location=Sequence derived from alignment at scaffold_489:8301..8456 (Clytia hemisphaerica)
AAGAATGGCTTTCACAAGTCGCAAAATATTAACCAACATATTCGAACAAG
AAAGGcttcatttgaaaaataaaacattaatacagatcatttaaaataat
tataacacctcgaaatttgagaaattaaatCTCTGATTAAAGTATAAAAT
TAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042874XLOC_042874Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068733-exon-scaffold_489-1491911889:8301..8456TCONS_00068733-exon-scaffold_489-1491911889:8301..8456Clytia hemisphaericaexon
TCONS_00068733-exon-scaffold_489-1510915933:8301..8456TCONS_00068733-exon-scaffold_489-1510915933:8301..8456Clytia hemisphaericaexon
TCONS_00068733-exon-scaffold_489-1575043694:8301..8456TCONS_00068733-exon-scaffold_489-1575043694:8301..8456Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_489supercontigscaffold_489:8301..8456 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068733 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top