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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068706 ID=TCONS_00068706|Name=TCONS_00068706|organism=Clytia hemisphaerica|type=transcript|length=883bp
GGCTATCATAATGCACAACAGACTCCAACCTTTCGTTGAAAATCTTGATC
ATGAGGCACAATGTGGTTTCCGTCAAGGTAGAGGTTGCATGGATGCTGTA
TTCACNACGATCTATCGCCCATAAAGCTCTGTGCACACACTTACTTCCCC
ATCGTTGACAATTTTTGCTACCTTGGTTGCTTTATATCAAGGGACTGTAA
GGATTATGTTGATATTACCAATCGTATCAAAAAGGCTAGCAATGCTTTCG
GAGCCCTACGAACGTCAATATTTTCCTCTCGTGTCATTTCTGATGAGGCT
AAAAGTGTAGTTTACAAATGTCTCATTCTACCGATATTGCTTTATGGCGC
TAAGTCGTGGTCCCTCACTGAGCACCTACTTCGTCTTCTGCGTAACTTTC
ACCATGCATGTATGCGTTCAATGTGTCGTATAAATCGTTCCCATGTCTTT
CTGTACCGAATAAGTACGGAATCGTTGTTGACAAGGTTGAATATCCAACC
AATTGAATTTTATATCTTCAATCGTCAATTATCCTGGTTGGGTCATGTAT
CGCGTATGTCGTTTGATAGATTACCGAGAAAGTTATTATCATGTTGGGTA
TGTAATGCTCGTTTGGTTGGTTCGCCTGAGTTCACTTATGGTAGAAGTGT
TTATAAAGCCTTGAAGTGGTTTGATATTGAGAAATctatttggtttgatt
tgatTAATGATCGTGGTAATTGGAGAAAATTGATAAATGTGtagtatatt
tcaaaatgctaGATTTTTCTTCTTAATGTTTTCACATCTGAATTTAATTT
AGTGACTTTTTATTGTCCTTAGCGTAGTGATTTCCTAGGAttatatttat
tatatatttttaggccAGTTCCTCGTGATTAGG Run BLAST on NCBI transcript from alignment at scaffold_487:168643..169525 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068706 ID=TCONS_00068706|Name=TCONS_00068706|organism=Clytia hemisphaerica|type=transcript|length=883bp|location=Sequence derived from alignment at scaffold_487:168643..169525 (Clytia hemisphaerica)
CCTAATCACGAGGAACTggcctaaaaatatataataaatataaTCCTAGG
AAATCACTACGCTAAGGACAATAAAAAGTCACTAAATTAAATTCAGATGT
GAAAACATTAAGAAGAAAAATCtagcattttgaaatatactaCACATTTA
TCAATTTTCTCCAATTACCACGATCATTAatcaaatcaaaccaaatagAT
TTCTCAATATCAAACCACTTCAAGGCTTTATAAACACTTCTACCATAAGT
GAACTCAGGCGAACCAACCAAACGAGCATTACATACCCAACATGATAATA
ACTTTCTCGGTAATCTATCAAACGACATACGCGATACATGACCCAACCAG
GATAATTGACGATTGAAGATATAAAATTCAATTGGTTGGATATTCAACCT
TGTCAACAACGATTCCGTACTTATTCGGTACAGAAAGACATGGGAACGAT
TTATACGACACATTGAACGCATACATGCATGGTGAAAGTTACGCAGAAGA
CGAAGTAGGTGCTCAGTGAGGGACCACGACTTAGCGCCATAAAGCAATAT
CGGTAGAATGAGACATTTGTAAACTACACTTTTAGCCTCATCAGAAATGA
CACGAGAGGAAAATATTGACGTTCGTAGGGCTCCGAAAGCATTGCTAGCC
TTTTTGATACGATTGGTAATATCAACATAATCCTTACAGTCCCTTGATAT
AAAGCAACCAAGGTAGCAAAAATTGTCAACGATGGGGAAGTAAGTGTGTG
CACAGAGCTTTATGGGCGATAGATCGTNGTGAATACAGCATCCATGCAAC
CTCTACCTTGACGGAAACCACATTGTGCCTCATGATCAAGATTTTCAACG
AAAGGTTGGAGTCTGTTGTGCATTATGATAGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068706-exon-scaffold_487-1491911889:168643..169525 | TCONS_00068706-exon-scaffold_487-1491911889:168643..169525 | Clytia hemisphaerica | exon |
| TCONS_00068706-exon-scaffold_487-1510915933:168643..169525 | TCONS_00068706-exon-scaffold_487-1510915933:168643..169525 | Clytia hemisphaerica | exon |
| TCONS_00068706-exon-scaffold_487-1575043694:168643..169525 | TCONS_00068706-exon-scaffold_487-1575043694:168643..169525 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_487 | supercontig | scaffold_487:168643..169525 . |
Blast
The following BLAST results are available for this feature:
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