TCONS_00068684 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068684
Unique NameTCONS_00068684
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4640

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068684 ID=TCONS_00068684|Name=TCONS_00068684|organism=Clytia hemisphaerica|type=transcript|length=4640bp
GAACAAGTGTATGCTGCAGACCTGCTTGAGAGTTTTAACTTCAAGAAAGT
AACGATGGTATTCATAGGTCGgaaggcaactttaagcttgaAGCGATTCC
GCAGAAAAGGAGTTACACAAAAAGTGTCGGTGACATCGAGCAGTAGCGAA
GCTGAAGAAGAATATTTCAACGAAACCGAcaacgaagatgaaaaacatGC
CGGCAAtcccaaaacaacaaaatacagcGAAAAACTAAAAGAAATGATCG
CACCCATGTCAACTAAATTCAACCTACACAAAGAATATAAAAAACTTGAA
TACCTGTGTGCTTTCTTTGCTTGCGCGTCACACCGTACGAACGTTATCTT
ACGTTCGCTAGGTGCGTTATCATGGCTTGCTAGCGTCGTTATTCATTTTG
CCTTCGACGTTAACGAGGCCATAAAAGTCTACGGCTACACCTTCTTAGCA
GCGCAGTTCTTCTGGTTGTTGAACTTCGTGGTTGGCACCCTAGCTATGCG
TTATCGTGTGTTACCATGGTTACTCGAAGGAATGAAAGAATTAAGACACG
ATGAATGTTATGAAAAAACAATCACAAATGTGCTCAGAATGGTTAAGaaa
attccGTATTGGGTTCTCGCGTTCGGATTTGTCGGCTCTGGTGCCCAACA
CCTTTTCTTATATATCGATGATGCGTTTAACGGTTCCTACAATTCATGGA
TGGAATCTAAAATCGTGGCCTCAATACTCTTGATCGTACGTTTCGTAACA
GCCGCTCATATTTACAGCGCTTACCTGTTGTTTTGGATGGGTCCAACTGC
GGTAATGATGGCGTGTGGTTACGCTATGTCCGAGTTCTTAGATCAATTCG
ATGCAAAGATTCGAGACACAAACCGAATAACATCATTCAAAGAAGCCATC
TCGTTGTATTCAAAACGCGCCAAATTCGTCAAAACCTCTTCCTCCAAGTG
TTTAGTTATCTTATCCATGCAATTACTATCTGTCGTCATTTGTTTTGGTT
TAAACACATACGTCTTCTTATTCTCGCCTGTTAGAAGATATTTGCATGTT
TGGCACTCCATTGTCCCACTACTCATCATGGTTTACCCACTATGCACTGC
GGCATGGGTTACTAAACAGTACACTTGGTTTATTATAGTTGTTGTACGAG
CTTGGGTGCATCGTGACGATTTAGATTCATCATCCAGTGATGAAGATTCA
GGAATTGATGAAATGAAAACGAGTCAAGATAAAAAGACATTCGCAGGGAA
AAGTCCTTTCTTCTCTAAAAAGAAACTAGACGAGTCTATTAGTTCTTCAG
TTGCTGGCATCTTCAAAAGCGGCCGCCCAAAGTCTGCGCATTTCGATTCG
CAACGGAAACTGTCTGGATTCAGGCGATCATCAAGTGTACAAATTAAGGA
CCGTAATAAAAGGAAATCAACGCAAAATCTCATGCCTTGGCAGAAAGCAG
TAGCTGAGAAACAACTTTCTGATCCGGGAAATATCGTTGGCTCGACTACC
TCAATAAACAGTGTGCCTCGATTTGCTTCAACCGTTGCTGCGGCAACTGC
TATAAACAAATTTAAGAATGTAAAAAACAGACCGAGATTCAATTTCGAga
aatttttatcttatttagagAGCATGCGTAGTGTGGTTGGGTTCTCCATC
TCAGGGATTATGGTCACGTGGGACTTGGTCTCCACCACactgtttttatt
gttttccaTCATAGCTGTTTTCATGCAGGAATCAATCTTTGGCGATCAAA
AAAGTACGTTGACTTCTTGATCTGACTACAACATAAGACCCTGTCCACAC
GTTGCATGGTGTGAATCCTTTTGAAGACAATGGAATCATTCAAATTGGCG
TGTTTGGGATTGAttttatttatcttatttttatttataaaaccgATATC
GTGTGCTAAATGTAAATCCAGCCCAATTTTTTGGAACAGCGCGATTAAGA
GTTATTAATTGCATCCAAACACTACCTCTTTGAGCTTTGGCCCACTGGGC
CTTTTTCCTTAATCTAGTGCTGTAAAATAAGTCGACATTTCAAAATTGGA
CTAAGTATTGATCCTGTTTTTGTGGAATTTGCTACTGTGTGCTACTACCa
ttggataccccttaaaatcacataccccttaaaacctacaaagttgcACT
TTGGGCTCTCTTAGccaccaaacttaatttaataGTATAATTCACTTTTC
TACTACCTGTTATAAATTTgctttcataaaatacctaatttcgAGAATTC
AATTATCGCGAAGTATcgtaaaattcgaagttatttgaaaattcaagttt
TTCGAACCTAGAGATTGCACAATTGAGTTTATAGTCATAAAACCGATACT
TTTTAGGTACCTATttatggtaggtatgaaaaaaatcattttcttcttca
tgatTAGACTCAACCGAAATCGTAAGGCCCTGAAAGTTCTATTTCAAGGC
TCATTATAGTAGTGGCCAATAAAATCTggaaatcgactttctcaaaacct
ggtcattctgtataccaaaatgtcacaaattcgatggagatttagaaaaa
cattagtaccatacgtcaaaaatgaagttaataaaagttttgaccctTCA
AGGtcgttttttgaagaaaaaaacaagtgCAATTGTATTATGGgtatgaa
atcctgaaaaatacaaatacacgttttttttttataagaacaaactatat
aagaacataaggcttcgagcccaaaaatttaagaacattctaagaacata
ctaaggctttggagacttaaaaacatgcaatttcttaagaaattacatca
aaatgctcaaaaaatgctgaaaataagaaaattttaagaacatttttagg
cttcaaattcaaaaaactaagaacatccgaaggcttcgaaaattttcgat
gttcttataaaaaaaaacgtgtattgtttTTGGAATGGATTTCcagcaag
tatttgatcaattgaatcacggTTTAGCACCTGGATTGCAATTTCACAGT
CTCAGTATGTTGTGAGTAAGGGGTcaatgtttgtaggttttaagatGTAA
TAGTGAAGATTTTAAggcatattttgattttaacgtacagttttgaaaGT
ATTTAGGTACCAATGATCCAATTGTAACGGtagtaactttgcagtgaatc
actgtataaaattttagaccaaacggactattttataaaaagttattcga
gaaaaaccattttgtcaaaaggacattttttcatgaaaaactgaaaactg
gttTCTACGAAACATCACTACTAGGGAAGAAAACCATTGACagcgtactt
tcaacacaaaaagtttcagcctcaaatTCCACCTAAATTTTCAGATAGAG
GGTACCTCTATTACTTGTAGGTTTAAGGGGTACCCACTGGTATAGTTTCG
AGAGATAAATACAAAGTCTAAACTTATCTAGCATATTTATATGGCAGGGC
ATAACCCTATGAATGTGAAAAAACATGGGTCAATAAACTTAAAATAAATT
GTagatatttttttagaaataattatttaacataatttaaagtttgatat
gaaagaattttttcatCCCTATCCTCGAAACAAAACTTCTACTCGTAAGT
TCAATGTCGCAAGTTTTGTTCTGTTTGACgaagaattttattatttttgt
taacTGGATATTGTCAAGAGCCAGATCAAAGCTTTACAAGTGTTTGCGGC
TTCTTAGtgaaaaataacttttctgCTGCTTCATATAATAAGCTCTCCTC
CATTCCGTCATACAGTCAGTCTAATTGACATCAATGTTCCTTGTTTACAT
ACAATGACGTATGACTAAAAAAACACATTGACCTTCTTAGCTTCAACAAA
ACTTAACCACGAGTTGCCGATTTCATTTAGGTTTCATGATTACCAAAAAT
TACACCGTGGAACACAGAACCACAATTCATGATATCCACGAGGTAATGTT
TTTAAGGAAACACCTCGGTTTTTTCCAGTAGTGGCAAACTTTGAACGGAA
AAGAACGGGGAGTTTCcgtagaagaaaaaaatattgcgtCATGAATATCA
CAAATACAACTTGCTTCTCTAATGAATGGAATGATGATGCCAATACATAA
ATTCGCTGGTTGGTGAACTCACATGTCAATGCAACATAATAATGTAGACA
GGCTAGCCACAAGTTCAGCATCCAATGTCCATTCTATGGTTTTATTCGGT
TCAACAAATGAATCACCATCAAACTTGGTAAAGGTCTAACTtattctttg
atgtaccattgtctcattttaatgattttaaatCCAAAAGCTGTGAAGAC
TTCTTCTTCCGTAGATCTTGAATACCTTCCAATTGGAGATTCCTTCTCGT
TCAACCAGAGCCCTCTTCCATCCAGATATCACTTTCCATTCAACTTGGTA
AAGGTTCCATGCTTGTTTTGATATCATGATCTCTCTGTAAAACTTCATTA
TTGTTCAATAGCCTTTTCCTCCTTTTGTAAAACTTATACACGATATAAAC
TCCAACACCAAGAATGAACAAGATGACAATTCCAACGATTACAAAAGCGA
TCTTGGTTTCACTTCGCGTTGCATCTCCTGTTAATGATGGATCTTCAGAT
TCTGATGAGCTACTCATTTTCTTTCAATACTTGATGATCT
Run BLAST on NCBI

transcript from alignment at scaffold_487:22109..40623+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068684 ID=TCONS_00068684|Name=TCONS_00068684|organism=Clytia hemisphaerica|type=transcript|length=18515bp|location=Sequence derived from alignment at scaffold_487:22109..40623+ (Clytia hemisphaerica)
GAACAAGTGTATGCTGCAGACCTGCTTGAGAGTTTTAACTTCAAGAAAGT
AACGATGGTATTCATAGGTCGgaaggcaactttaagcttgaAGCGATTCC
GCAGAAAAGGAGTTACACAAGTAAGTAAAACTTGATTTCTGGTTAAAAGA
AGATNttcaggggggggggggcacgcagttactacaagacagtatgacac
ttactaccgtggtggtactgtattcagaagttatgaaaacagttactaca
cagtgtagtagctgctgtttgggggtggtgccaaacactaaaaccAGCAC
TTTCGGTGTAGTaaatgcttatattttaattctttttaaagaactttcaa
aatttttctcagacccaacGGAAATTATGCTTTCCCTAATTATCATTAAA
ATGTTCTCAacagctgttaaccaagtaaattaaaagaaaatctagcacaa
aaatggctttaggtTGAAAAATAATGGCAATTTAGGGTAATTGCGAGCAT
GTTTTTGATGATATCACTCATGTTTTGGATGAAATCACTCAAAAACAGGG
GTGGTACCTGGAAATCTTTTCTGAAAACAGTTACTATCAAGGTGTAGTAa
ctgcaaagggtggtggtcctgaaaaaaagtgttgaaaaagcacttactac
acatcatgtcttgtagtaactgcgtgcccccccccctgtttctGGTTAAA
AGAAGATGAATTATATTTTAAATCTCGCCAGGTTTACACAATACCCTGTA
GAAAAGAATTCTGCAGTTTGCGCAGTTATGGCTATCTAGTTAAATATTCT
AGGGATATTGGATTCTTGTCGAATGTGGGAGTATCAAATAGTGAGAAGTC
TCCCTTATCCAATAAACAATCGGTGAAAAATTTAACCGGGACATGCTCTG
TTTGAACGTGAATCAGGACTTGTATCAAATGTNAAAAATTTAACCGAGAC
ATGCTCTATTTGAACGCGAATCAGGACTTGTATCAAGCGCTAATATATTA
AGTGCCTTTTTTAAGGCGTTACTAAATAAAGCACGTATCCCTGTGTGTAT
ATTAAAGAACGTTCTAGAAATAATGTTAAGCCTGTAATGAGAACTGCCTC
TGTTAAAATTTATTTGTTCTTAGTGAAAGTAGGGAAGATCttaattttgt
tttgttatttaGCTAAAAGGAAAgatcataatttttcaaaaattgcattc
ttCTCGTCGGGGAAGGTCGAAAATCTATTAGTAATAATCTTATGTCAAAA
TGAAGGTATAAGTACCTATTTAAAAGCTAAATCATAGTGAtatcaaaaac
atttcaataagTGATAATACGTTCTTTTTATTATGATACCTCAATCGTTT
ATACTACTGACTATAATACCTTATTGATGAACTGATCTCGGATTAACTCG
GATAATTTTAATGGTTTGATGATGAGAGGCTGTTAATTAAAAGTCATTAG
AGTGTTTAGCGATCCTCTTAATGACCAATCATGCCTAAGGATAGTAAAAA
ATACAaggtaatgtttatttttccattttgtttattttataggGCTTTCT
TAAGTCAAAAATCTCTAGATTAAGCTGTGGTTGGTCCTAATAGGGTGACG
TGAGTTTTCTCTCAGATATTTGACTTTGATAATTGTGATTTTTCCTGTGG
CATTTGTTAGTTGTAGTTTTGAGCAGTCACTGTTTTACGTATTTGTGATT
CTTTGAGCTATCAGTATTTGGTTTTAATAAGATAATAAAGACGCAGTTTG
TATTTGGAACCATTTTTATGGTCTACTGTGGCATTTAAAGTTTGATTACA
GCAATTGTAATTAAACTCCTTCCTTTTGAGTCCAAAAGCAATTCTTTTTG
GAGGCTGTATTTGTTCAAAGTTGGATTGAAAAGGAAAGGAATTTTGGATT
TCAAGAAATTCTGATGGAAATTGGAATCCATATAACACTTTGGTCGATAA
AGAGAaacagaaaataatttttgtcgaAAAGTCTTGTTTGATGAAAGATA
TTGCGCGGTGATTTGGGAGAAATCTCTAAGAAATGATGGATCATAACGAT
AAAGTTAAAATGTGGCGTTTGCTCGTCGAGCGTGCTGCTCTGAAGAGGGC
TTACAAGCAGGTATTTTAAATCTATCTTTCACTTTCAAAAGTAGTTTTAT
CTCCGTCTCAAAAATAAATTGTTAAATATCATATTCTACATactgtaaaa
atgaaaaaggtttatcgttagtgtagcctggatatccaggcggTAAAATT
TTTTAGATGCTTTATATTTCTGGTTTACGGCCTCTTCCTAAAGCGAATGC
AGTGCACTTGATTGCGCTCGATCCGTTAAAGCTGTAGAGTGTGATCTATA
TGACGAGGAGAAACTCCCTTgcaaaaatacatgttttttcttttacaagc
ataacgtttataggcatatgcaggctcagttttgggtacctaaacaatag
aatgttaagcataatgcgagcccgatataggggcagacacttgcatataa
aaaaaacatgtagggcAGTGGCTCccacttgctagtgaagataaagctgt
tacatgaaaacatgaaaaagaagaaacaaagaGGATAGAggatcattttc
aaaaataaacatGGTCGGTCATGGTGATGCATTCACACTTTGTtgtggac
tttggtgtaattttTGGATGCTTGAAATGTCTTGAGAACTTGCCAGGCTG
CTTTTTCTACATTTCTGTATTGTTGCGTTTGGTGGGTACACTTTCATACT
CTAGGGTGACCAAGCTGTAATTTCAGAGTTTTGTATGTTGAGATTTTACT
TCCACTGAAACTTATAACTCGGATATCAAGTCTAGGTTAGGGGGAGTAAT
AGACTAACCGTTGAGTTTAAaggccgaagggctagagtagaatctctaac
ctttcccaggcaaaaGAAAGTGAAGCcaattatttcccatccaaaacgcg
cctagaacgcgtcgcaatcatgacgacggattgtatctagcggtaacttt
gttttgaggactgtatcttttgaaatctagcgatagattttagtttctat
ccggcgtttgtgtgaaacaacgcgcgggcgttctggatgggaaataagtg
gtttcatttcccatccaggagtctcgagtctagcccttcgggcttggaag
acTAGACTAGCACGCGTCTGCCTTTCCTGAACCACAAAAACGAAATACTA
cttataaagagttcttatacaGAAAATTAAATTACCGCTGGAGAGTGGTT
TCGAAAGTATTCAGGCGAAAGTTTAGTAAGTCCAATGCAAGCGTAAGCTG
CCGTGAAATACAGCGACGTGGTTTCCTAGTCTACTGAGGTCTTGttaaaa
gttttcagaagataattgattgatttaattgaCATCAAATTTACTCCTAA
TTATTTTGCTGCTCTGTGTCTTTTTTCGATTATCtacaacaaaatttaaa
attgttaGTTTCAATTCCAAAGGGACatagaatatttaaaaaaaactcat
tgaatgtttttcacaattttccttgaaacatcaccttttgagtttttttc
gaCTGGTTTTGTATATTGTTTGAGAACTATTAATAAAATCGAATCGAAAT
TTTCAAGAGTTCTTCTTTGAATAAGTGGAATTAAGTTAGGAATCATCAAT
CATGCCACAAGTGGCTTTAAGAAATAGACTGAGTCCGCAACTACTTGTGC
GCACTCGTTCGTGTTCGCCTTCACATTCGCCCGCCGTACAACGCTTGAAC
AGTCACGCGATAAGTCGCTACCAACGAAAGATTGTAAAACGTCAACGGCA
ACGGAAATTAGCGGTTTTAAAGGTAAGGTTACAGTATCCATATAGATGTA
CGTTTTTTTCCCATCCAATACAAATCTTTTCAAACTTTCCGATGCAACAT
ATTTGGTTGCCGAGGGCTTTCGTGTAAATAAGTCTTTGAGCAAAATTGTA
CGTACGCACGCTGAAGATAAGATTCTAAAATATGATTTGGAACATGTTGT
AGAATAAAACTTTCAAACGCTCCTATAACgttctatatttttcaaatctc
tTACACGCCTTCTTATAGGAACAGTTCCATAAGCATGAGAACACGAGGCT
GGAAATTGGCCAAACCCTAGAACAAATTatgaacaatctgagcctcagat
ttcagaagtTTCTAAGAAAGTACTGAATTTAACGGATTTAACAGATGTAG
ACCGATTTTAAGTTTTAAGACTGGCTCCGGTAATAGTATATACTATATag
cataaaaaattttttttttaagttttaatgaaaatcttatATATAATTCC
AGCCCAATTTTGGTCGGGTTACGCGTGGTGCTCATTTGGTTCAGCTGTCA
GAAGTGTGGTTTGTTTTCTTCCGTGTTTTGATGGactttattttttcaga
atAGTTTTTCTCTGCGATGTTGTGAAGTTGtgaatatcaaaaaaatttca
gaaaatatttaaattttaaggattattaaaaagaattgtAATGAAAAACT
CCTCCCGTCCCAATTTTCACGCTAATCAGAAGTGTGGAATtatccatttt
ttgtttttttttaatgtttttcatttttactcACTCATTTATTATAACAT
TGTGAGTATTTGAAGATCAGAAGCCGAGGACTTgaagattgaaatttttt
ttgacgattAGTATTCGAGACATTAGAAGCATGTCTCAGCTCCAGCCTTC
AACGAGTAAATTAGGTCCTCGTTATGTAATCAGGAGACTAAGTCCGCGCA
TCTGTGGGATCCGCGGCCGCTCTCATCCGCCCGCGCACCGCCTGGATAGT
CGAGGGATGAGCCGGTACCGAAGGAAACAAATGAAACGCCAACGTCAGCG
CAAATTCGGCGTTGTAAAGGTGAGAAAAAGTGGTTTGTAAACAAACCGGG
GATATAGAAAATAAGGTTgtgtctacacgtttttttttataatatatata
taNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNTAGTCACAAGTTTGCATATTGTTGACCCTATGCTGATCCCTCTATAT
TTTGAGGGGTCTTGTTTGGAACCTTTATTTTTCCAAAGAGTTTTAAGGCG
CGAGTTGCTCCATGTTTCTGGGATATCATTATTCATCCATAGGTTTGTTG
TAATATGGTGCATTATTTGTGATAAGATGGGATCATCGCATAGTTTTAGA
AGTTCAGTATCTACGTCATTATTAGCCTTATTGTTTTTTAAGCTGGCGAT
TTGTTTTTGGATTTCTTCAATAGTGGGTGGGCTGTCTTCAATATCTGTGT
TTGCTGATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttccccccccccc
cccccgaccaAGGAGATAGAAATACGACAAATATGTATTTTCTAAGCTCC
CCAGTTATATAATTTGATCAAAGTATGATGTACTGCTCGCGCTACAATAT
AAGAAACCATAGATATCATGCAGTTTGTTAAACGGATTATAGATCGTCAT
TATTTTTATGTATTTGGTAAAAAATTCACATATGAATTTGTTATTAATAT
GTGTGCTTGAAGCTGCTATTAGTTCAGATTTCTTATCAAATTGGCGAAAA
GTTGTGATTTCTCAATGCACATTTGTACTGTTAATTTCTAACGTACCTGA
ACATCATATTATTAGTACTATCAACGGCTTTAAAGACGCAGTAGATCTTA
GGGCAACACTAACGAGAAATTTATTGTTCCTTACACTACCAACAAACTTT
CCTGATCGGAGCATACattatttccattgtttctttaTCGATTGAAAGGT
TTTCGAGCCAAATTATGTTTTGTGGCTTGTTTGTTTTGAGTACTTCTTAG
CTTTTACAAAGATTTATCGCTAGAAACCATCTTGTCCTTTGATAGAGGGC
TTTAGTACTGCATAAACGAacattgattttgttttccGATTTGTTTGGGG
AAGAGTCAAAAACAAACTGAGAAGACATTTTTAAACCTGCAGACAAGAAT
CTTTGTTTACATCTACCCTTGGCATTGTAAAACCATCATTAGAGATCACC
ACTTTGGATCTCTAATTCAAATTGAGAGTGCTTGTAAAATTTCCCTTAGA
TTGTAGCGTTTTCAATACTACAAGAACGTTTTCGGGTGAAGAAGCATGAA
ATTTTTGAGAACTAATCGCCCTCTTGTTACCATCGCGGAAATAAATTCTT
TGGACACGCATAAGATTCAACAAGAATCCAAAAGTGAAAAGGTATAATtt
gtattttgtaaaaatttcacttttgtaAAATTGCCTCGATATTTTCTCAA
GGAACGTCGTTTGAAATTAATGATAATTTTGTAATTTCgtgaaaaatctt
tgatcattTTGTATTTCTAAAGTCTTTGacaatgtttcatttttcaaaag
aatcgtttattgttttgatgttcgTTTTTCAAATGAAATCTTTCTCACAT
AATTTTGTAAATCTCAAAGATAACCTTAACAGATCTTTTATTATTGTTTC
TTTcccaagaaaaatatttgaaaattttatttttctgaagGAAGATCTTA
AAGCCTCTTGTATCTTTGACACtgttgtatttttcaaggaaaatctaTTT
TTGTTTCTCCCTGGCCCTCTCAGTTTCTCATGGAAAATGTTTGACGATGT
TGTATTTCTAAAGGAAAAAGTTTGACGATGTTGTATTTCTAAAGGAAAAT
CTTTTATCATTTTGAGACTCCAAGGAACAATATTATGCAAGGTATAATTT
TTTAATGGAAACCTTTGATCATATAGTTTTGGTTATGTCTTCAGCCAAAA
CGAATAGTGTCTAAGATGTCATAAAAAGAGCAAACTCTTAGCTATCAAAG
GAGATCTGAACCCTATTCTAAAACTATCCAAGCCTATTTATTCCCTACTC
TCATCCAATTCGATCAATGATTAGATTTACCAACCagatacagcacctga
ccccgagaatgtagtaaaccccgagaatgtaggtttctcattttttagca
ttgtagccctaacgatagttcaacttcataaaaatttgNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatcaa
cattttactattactagatttaaagccataaaaccaaacctacattctgg
gggctataacgaaaatgggagtcaacttcaaggaccaaaaaaattggtgt
atctatcaaaagtaatgaaactaacccctgggaaaggattttgggagttc
aaaatttcgttgaaaatatttaatatcttttaaaatgcaaatctaTATCT
TTCacgtctgattcaaatttcacctacattctcggggtcaggtgctgtac
ctTTTCACACAAAACTTGTCCTGAtcattttttgatgaatttagTCCTCT
GTGACGTCACTATTAGGTTCTGTTTATCTTTATAATAGACAGGGGGTCAG
TGAGTTTGTTTAACTTATCTCCTCATGTTTTCTTGTTTCATTATTCATGA
AAATTGTTCttgtttataagaataatgTTTTGATGATGAACAATATTTCT
TATAAGAACTTGATTAAGCATTAAATATTCCAATCATTAAATAAAGCGGG
GATTAGCTCCGAATTTAAATCTAGGATCGTAattatattcaaaatgaaat
gtACCCTCTAGCTAGTTTAAGAAATAGATGGCTTATAAGTATTTTAGCCG
GAAAGGACTTTTTTCTATAACAACGTTGGCTAAAATTGtacatttctaaa
attttatgaGACTGAGTTTACAAATTAGATTAAGAGTATTTTTGGAGGAC
TAAAattatgatgttcttataagTAAGTGTTTCATTTCCAATCGACGACA
AGGATGGAAAATAAAGTAGATGAATAAGTTGTTCAAGCAGAAGGAAATTA
CTCCATTTTTATTCAACCAAGACTGGTGAATCGatcgaaaaagtttttca
cgaaatttgagcaattttatgttcattttgatttgatcgaGACTTCATTT
TCTCTAATGAtgaatattttggaaaattcaagTTCTCATCTATTTTGAGC
ACAAGGTTTTTCTCAGGAGGAGGAGGAGCTCAAAGGCTAATGTTTTAGTT
TGTGtgaacaaattttatttgagttgtgattttcttttttggaatttctt
AAAGAGAATTTGTAATCATTTTTGTTCTTGTACAAAATGAGTTGTGTTTG
TTCCTTGTTTTGCCGCACCAATGTAAGTATTTAGCGTCCGAAAGTAGAGT
GTCTGTGAAAGAGGCCAAATGAAATTTCGATTATAGTGACTTTTCGCCTT
TGAGGTTGTTTCTATCTTCTTCATATCCACTAGCTTCATGTGACCGAGAg
aaattgtttgattttttcaagTTGTTGTAAAAGTTGTTGTTTTTACGTTG
ATATGGTTAAATAAAAGCTAAATAAAATGTCTCAAGAATGATCTATTTTC
CTTCCACAATCAAAGCTTAATCTATAACGGTTGTTGAAATTAAGGGATCA
AAATAATACGTGATTCTTAGGATTAATATTGTTGACCTGCAAACGAAGAC
TCCCTTTAAAAcgagttcttataaaacataCTTTAAATCAAGTCAGTTAT
ATTAAAACCCAAGGAAAGGTAAGTATGGCTCTTCCATTAGAATCTTTGTC
TTTTGAAAAGCTTTCTCTGCAATTGGCTACACCAGATTCCTTCATTTCCA
TCGtaaaactcaaatcaaaagCCTCCTTGTAAGGATCGGGTTTAAACTTT
CGTTCATACATTTTGGAAACTTCAGTTCTCCATTCTATCCCCTTTCAACA
GTTTATATAGCAACATAAACATCAACTACTTTCCTTCTTCTTATCTTCAG
AAAGTGTCGGTGACATCGAGCAGTAGCGAAGCTGAAGAAGAATATTTCAA
CGAAACCGAcaacgaagatgaaaaacatGCCGGCAAtcccaaaacaacaa
aatacagcGAAAAACTAAAAGAAATGATCGCACCCATGTCAACTAAATTC
AACCTACACAAAGAATATAAAAAACTTGAATACCTGTGTGCTTTCTTTGC
TTGCGCGTCACACCGTACGAACGTTATCTTACGTTCGCTAGGTGCGTTAT
CATGGCTTGCTAGCGTCGTTATTCATTTTGCCTTCGACGTTAACGAGGCC
ATAAAAGTCTACGGCTACACCTTCTTAGCAGCGCAGTTCTTCTGGTTGTT
GAACTTCGTGGTTGGCACCCTAGCTATGCGTTATCGTGTGTTACCATGGT
TACTCGAAGGAATGAAAGAATTAAGACACGATGAATGTTATGAAAAAACA
ATCACAAATGTGCTCAGAATGGTTAAGGTATTACGGTTCTTTACCTAATT
CGTTTGCGCGTTTTACCCTCTTAAAACTATAATCCTGTGAACCTTGGAAA
TACATAGCCGAAATCATCCACTGTATTTTTGCCTGTGCTGTCTGTCCATG
CTCATACTCGAGATAATGAAAACTCaaatagttgtaataaaattgttgat
gaaaatttgatatctgGAAGCAACCCAATATTTAGTTAAGGTCGATGACC
ATGTACTTTTTCAATTCTTATTTTTAATAACGTTCGGCGTAACCTTTAGA
CATTTTAGGTGAAAGACATTcatgtattttgtttttcttagaaaattccG
TATTGGGTTCTCGCGTTCGGATTTGTCGGCTCTGGTGCCCAACACCTTTT
CTTATATATCGATGATGCGTTTAACGGTTCCTACAATTCATGGATGGAAT
CTAAAATCGTGGCCTCAATACTCTTGATCGTACGTTTCGTAACAGCCGCT
CATATTTACAGCGCTTACCTGTTGTTTTGGATGGGTCCAACTGCGGTAAT
GATGGCGTGTGGTTACGCTATGTCCGAGTTCTTAGGTAAGGTGACTTCCG
TTCAAATCTGGATTAAGGGCTAGAATGGGCATCTAGTACTTTTGATTAGA
AGAGATTGTCAGTCGTTTCGGAAAAAAGATGGAACTGTAGAGCAAAGGCA
ATCAGAACTTACCTATTCTACATAAAATTGGGAAACTTTTGATTTGTAAT
ATGTCCagtactaccttaagggaacttattttggcgggaactaattttga
cgagcggTAAAAATCCTGGAAATTTTGCcgattgatgaatttttttaatt
ttgccgggAACTAATTTcggcgaattttgtctaaatttgccgaattcgcc
aaaattagttcccgtcaaaataagttctcttAAGGTAGTAAGCTCGTTGA
GTCAGCTCCTGGACTACAATGGCTTCaattaccagtggataccccttaaa
acctacaacaaaaaaggtaccccctatatcctgataaagaaaacagtaag
ggctgaaactttttctggtgAGTCTAGGCTATCTATGAGCTTCTTCCCCG
GGTATGGTTTTTTGTAGAAGCTGCTAAGAAAATCTTTATTGCTTtgtgaa
aaaatgcaattttagctatttaccccttaaaacctacaaaatggttttct
tgaataactttttatagaatAGTCCTTTtagtctcaaattttgaacactg
CAAAGTAAGTAATGGTACATTTAGATCATTGGTaccttaaaatttttgaa
acgttactaatgtttttctaaatctccatcaaatttgtgatattttggta
tgcaatatgaCCAAGTTTGAGAAActcgattttcaaattttattggcCAT
TACcataaatgagctttaaaatagaattttgaGGGCCTTACAATTTCTTT
GGGGTGCAACCAtggagaagaaaatgattttttcgtatctaccataagta
taggtacctaaaagtataggttttatgaccttaaattgatttgtgtaatc
tctaggtccgaaaaacttgattttttgaagggatttttgataaagttttc
aataacttcgaattttacgACATTTTGCGATAATTAGAATTATTGAAATG
AGATATTTTATGAAAGTACCTATATTAgagattgtaaaaaagtgaattat
acaatattaGATTAAGTTTGGTGATTAAGAGAGCCTAAAACccaactttg
taggttttaaggggtatgtggttttaaggggtatccactggtatatGATC
AATTCAGAAATTCGAAAGAAAAAACTAGGAAAAAGTCAGTAATTTCCTGT
AAAAAACATTTGGTACAACCTTACTACTGTTTATCTCTATTAAGTAATCA
ATTAACCAACTTCGTTGCCGTGTATccaaggctttatttacgttactgat
acGCATCAgtgaataccctggtgttggctggtGCCAGTCTCCCCTCTCAA
AGAAGGTAGACTATTCACAAAACAATTCTCGGATATTATCTGGTTCTGTT
TGTAAGCGTCAAAAAGCCGATTATAAACAGGAAACGATGTTGGATATCAA
CGACAAATCTTTCAATCAATTCCATTATAGATCAATTCGATGCAAAGATT
CGAGACACAAACCGAATAACATCATTCAAAGAAGCCATCTCGTTGTATTC
AAAACGCGCCAAATTCGTCAAAACCTCTTCCTCCAAGTGTTTAGTATGTG
TCATTTCATTATTAATTATTTTCGAACAGATTTAGGGGAAATGAAAGATT
TGATCTTGTGTCCTTTGGAAGATAATTTAGTAGGAATTTAGTTTAGGGGA
TGGCTAATTTTTCATAGGGGGTTTAACTTGAAAGAAGGctggaaaatttt
attttggagAGGATTGATATGGCAGCTGCTTGACCTTTTTTTGGACATTC
GAAGTAGATCAGGTAATGAAATTAGGTAATAGAGGGGGAATACTGTCTAT
CGTAAACAACTTGCTTTTTGATGTTATAGCTGAAAAAAGTGTTCTTTACA
TAGTTTGTAGGTTTAAcaagatttccaaaatttagACTACCAGTAGGGTT
AAAACCACGGATCATTATTGATAAGCTAGTGAAATTATACTGAAATTTAG
CCTTAAGTTTTAAGTTCAAGtcttaagtttttcttttctttctacaACAG
GTTATCTTATCCATGCAATTACTATCTGTCGTCATTTGTTTTGGTTTAAA
CACATACGTCTTCTTATTCTCGCCTGTTAGAAGATATTTGCATGTTTGGC
ACTCCATTGTCCCACTACTCATCATGGTTTACCCACTATGCACTGCGGCA
TGGGTTACTAAACAGTACACTTGGTAAGTTGTTGATTTTGTTTCTTATTT
ATATAAAACTTTAAACTGTGTAGAAGATTTTAAATTTAGGTTTAAGTTCA
AAAAGCTGTAAATCTAAGGAATAAGAAAAAAGCTAAAGGAACTAGTTTGT
TACTTATCACATAAGGATGAATGTTCTTGGGTTCTTCCTGAAAACAACCT
TTGTCTGAAGGAATTGACTACAGTATAACGATTTTTCTTCCTTTCGTTCC
AGGTTTATTATAGTTGTTGTACGAGCTTGGGTGCATCGTGACGATTTAGA
TTCATCATCCAGTGATGAAGATTCAGGAATTGATGAAATGAAAACGAGTC
AAGATAAAAAGACATTCGCAGGGAAAAGTCCTTTCTTCTCTAAAAAGAAA
CTAGACGAGTCTATTAGTTCTTCAGTTGCTGGCATCTTCAAAAGCGGCCG
CCCAAAGTCTGCGCATTTCGATTCGCAACGGAAACTGTCTGGATTCAGGC
GATCATCAAGTGTACAAATTAAGGACCGTAATAAAAGGAAATCAACGCAA
AATCTCATGCCTTGGCAGAAAGCAGTAGCTGAGAAACAACTTTCTGATCC
GGGAAATATCGTTGGCTCGACTACCTCAATAAACAGTGTGCCTCGATTTG
CTTCAACCGTTGCTGCGGCAACTGCTATAAACAAATTTAAGAATGTAAAA
AACAGACCGAGATTCAATTTCGAgaaatttttatcttatttagagAGCAT
GCGTAGTGTGGTTGGGTTCTCCATCTCAGGGATTATGGTCACGTGGGACT
TGGTCTCCACCACactgtttttattgttttccaTCATAGCTGTTTTCATG
CAGGAATCAATCTTTGGCGATCAAAAAAGTACGTTGACTTCTTGATCTGA
CTACAACATAAGACCCTGTCCACACGTTGCATGGTGTGAATCCTTTTGAA
GACAATGGAATCATTCAAATTGGCGTGTTTGGGATTGAttttatttatct
tatttttatttataaaaccgATATCGTGTGCTAAATGTAAATCCAGCCCA
ATTTTTTGGAACAGCGCGATTAAGAGTTATTAATTGCATCCAAACACTAC
CTCTTTGAGCTTTGGCCCACTGGGCCTTTTTCCTTAATCTAGTGCTGTAA
AATAAGTCGACATTTCAAAATTGGACTAAGTATTGATCCTGTTTTTGTGG
AATTTGCTACTGTGTGCTACTACCattggataccccttaaaatcacatac
cccttaaaacctacaaagttgcACTTTGGGCTCTCTTAGccaccaaactt
aatttaataGTATAATTCACTTTTCTACTACCTGTTATAAATTTgctttc
ataaaatacctaatttcgAGAATTCAATTATCGCGAAGTATcgtaaaatt
cgaagttatttgaaaattcaagtttTTCGAACCTAGAGATTGCACAATTG
AGTTTATAGTCATAAAACCGATACTTTTTAGGTACCTATttatggtaggt
atgaaaaaaatcattttcttcttcatgatTAGACTCAACCGAAATCGTAA
GGCCCTGAAAGTTCTATTTCAAGGCTCATTATAGTAGTGGCCAATAAAAT
CTggaaatcgactttctcaaaacctggtcattctgtataccaaaatgtca
caaattcgatggagatttagaaaaacattagtaccatacgtcaaaaatga
agttaataaaagttttgaccctTCAAGGtcgttttttgaagaaaaaaaca
agtgCAATTGTATTATGGgtatgaaatcctgaaaaatacaaatacacgtt
ttttttttataagaacaaactatataagaacataaggcttcgagcccaaa
aatttaagaacattctaagaacatactaaggctttggagacttaaaaaca
tgcaatttcttaagaaattacatcaaaatgctcaaaaaatgctgaaaata
agaaaattttaagaacatttttaggcttcaaattcaaaaaactaagaaca
tccgaaggcttcgaaaattttcgatgttcttataaaaaaaaacgtgtatt
gtttTTGGAATGGATTTCcagcaagtatttgatcaattgaatcacggTTT
AGCACCTGGATTGCAATTTCACAGTCTCAGTATGTTGTGAGTAAGGGGTc
aatgtttgtaggttttaagatGTAATAGTGAAGATTTTAAggcatatttt
gattttaacgtacagttttgaaaGTATTTAGGTACCAATGATCCAATTGT
AACGGtagtaactttgcagtgaatcactgtataaaattttagaccaaacg
gactattttataaaaagttattcgagaaaaaccattttgtcaaaaggaca
ttttttcatgaaaaactgaaaactggttTCTACGAAACATCACTACTAGG
GAAGAAAACCATTGACagcgtactttcaacacaaaaagtttcagcctcaa
atTCCACCTAAATTTTCAGATAGAGGGTACCTCTATTACTTGTAGGTTTA
AGGGGTACCCACTGGTATAGTTTCGAGAGATAAATACAAAGTCTAAACTT
ATCTAGCATATTTATATGGCAGGGCATAACCCTATGAATGTGAAAAAACA
TGGGTCAATAAACTTAAAATAAATTGTagatatttttttagaaataatta
tttaacataatttaaagtttgatatgaaagaattttttcatCCCTATCCT
CGAAACAAAACTTCTACTCGTAAGTTCAATGTCGCAAGTTTTGTTCTGTT
TGACgaagaattttattatttttgttaacTGGATATTGTCAAGAGCCAGA
TCAAAGCTTTACAAGTGTTTGCGGCTTCTTAGtgaaaaataacttttctg
CTGCTTCATATAATAAGCTCTCCTCCATTCCGTCATACAGTCAGTCTAAT
TGACATCAATGTTCCTTGTTTACATACAATGACGTATGACTAAAAAAACA
CATTGACCTTCTTAGCTTCAACAAAACTTAACCACGAGTTGCCGATTTCA
TTTAGGTTTCATGATTACCAAAAATTACACCGTGGAACACAGAACCACAA
TTCATGATATCCACGAGGTAATGTTTTTAAGGAAACACCTCGGTTTTTTC
CAGTAGTGGCAAACTTTGAACGGAAAAGAACGGGGAGTTTCcgtagaaga
aaaaaatattgcgtCATGAATATCACAAATACAACTTGCTTCTCTAATGA
ATGGAATGATGATGCCAATACATAAATTCGCTGGTTGGTGAACTCACATG
TCAATGCAACATAATAATGTAGACAGGCTAGCCACAAGTTCAGCATCCAA
TGTCCATTCTATGGTTTTATTCGGTTCAACAAATGAATCACCATCAAACT
TGGTAAAGGTCTAACTtattctttgatgtaccattgtctcattttaatga
ttttaaatCCAAAAGCTGTGAAGACTTCTTCTTCCGTAGATCTTGAATAC
CTTCCAATTGGAGATTCCTTCTCGTTCAACCAGAGCCCTCTTCCATCCAG
ATATCACTTTCCATTCAACTTGGTAAAGGTTCCATGCTTGTTTTGATATC
ATGATCTCTCTGTAAAACTTCATTATTGTTCAATAGCCTTTTCCTCCTTT
TGTAAAACTTATACACGATATAAACTCCAACACCAAGAATGAACAAGATG
ACAATTCCAACGATTACAAAAGCGATCTTGGTTTCACTTCGCGTTGCATC
TCCTGTTAATGATGGATCTTCAGATTCTGATGAGCTACTCATTTTCTTTC
AATACTTGATGATCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042848XLOC_042848Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068684-exon-scaffold_487-1491911889:22109..22228TCONS_00068684-exon-scaffold_487-1491911889:22109..22228Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1510915933:22109..22228TCONS_00068684-exon-scaffold_487-1510915933:22109..22228Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1575043694:22109..22228TCONS_00068684-exon-scaffold_487-1575043694:22109..22228Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1491911889:33559..34035TCONS_00068684-exon-scaffold_487-1491911889:33559..34035Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1510915933:33559..34035TCONS_00068684-exon-scaffold_487-1510915933:33559..34035Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1575043694:33559..34035TCONS_00068684-exon-scaffold_487-1575043694:33559..34035Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1491911889:34350..34593TCONS_00068684-exon-scaffold_487-1491911889:34350..34593Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1510915933:34350..34593TCONS_00068684-exon-scaffold_487-1510915933:34350..34593Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1575043694:34350..34593TCONS_00068684-exon-scaffold_487-1575043694:34350..34593Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1491911889:36139..36251TCONS_00068684-exon-scaffold_487-1491911889:36139..36251Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1510915933:36139..36251TCONS_00068684-exon-scaffold_487-1510915933:36139..36251Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1575043694:36139..36251TCONS_00068684-exon-scaffold_487-1575043694:36139..36251Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1491911889:36709..36881TCONS_00068684-exon-scaffold_487-1491911889:36709..36881Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1510915933:36709..36881TCONS_00068684-exon-scaffold_487-1510915933:36709..36881Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1575043694:36709..36881TCONS_00068684-exon-scaffold_487-1575043694:36709..36881Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1491911889:37111..40623TCONS_00068684-exon-scaffold_487-1491911889:37111..40623Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1510915933:37111..40623TCONS_00068684-exon-scaffold_487-1510915933:37111..40623Clytia hemisphaericaexon
TCONS_00068684-exon-scaffold_487-1575043694:37111..40623TCONS_00068684-exon-scaffold_487-1575043694:37111..40623Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_487supercontigscaffold_487:22109..40623 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.186864	0	0	0	0	0	0	0	0	2.32691e-07	0.984052	0.0538372	0	0.192507	0.727303	0	0.275971	0.925513	1.22039	0.809805	0.744512	0	3.99235e-06	0	0	4.59155e-08	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068684 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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