TCONS_00068633 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068633
Unique NameTCONS_00068633
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3063

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068633 ID=TCONS_00068633|Name=TCONS_00068633|organism=Clytia hemisphaerica|type=transcript|length=3063bp
ATTCTACTGGTAAATCATTCTCAGTTTTGGACTTTCCATCTGAAAACAAC
CCTAAAATTCATGTTTTGGAATCTAGTCCTAAAGCAGCAGTTTGTGATGA
CATATTGACAcaacaaactttagaaatatCCAACCTACCTATTTCAGATC
GTTTTAATAGTTGTTTATATGATTCTGAATTGAACTGCTTATTCATTTTC
ATCAACAACCGTAATGAACACCACCTTggattaaaaataaatatttttgg
attCTGGTTAGATTCTtcaaaatatgattcttcagcATGTATCGTATTCA
ATCCAACGTCTACAGTAAAAATGTCTTTGGATATTGAGGGTATTAATCTT
TACACCAAATCCTTGGTAAAAGCTGGACAAACCCATTACATAGCACTTTT
TGCCCGCGGACTGAAATACGGTTTCAAGTCATATCAAGTTGATTATAGTG
AGGGACCTGTCATTCACCTCATTCAATATAATTCTGCACGTAATAGTTTC
TTACATCATCAACAAATCCAACTTGAGGTTGGGATCGtggaaaataattt
aaaaaacttgGAATTGTTTTTGGACGCAACAGCATCAAAAATTTATCTCC
TTGAGCCATACTCTCCTTATGTTATGAGAGAATTATCAAGCTCCGGCGAA
AAGCTTCACACCTATGAAGTGCAAACTGAAAAATATGTTGACTTTATAGA
ACAATGCAGTAATTCAACTTTCCTATACGTCACCGAAGACATGATTGTCT
ATTTAGTCAATCTTTGTAATGGTAAAATTcatattttaaaagaattttca
ctTTGCATTGGCGTAGATGGAATTCAAAGATTTCGTTTGTTTTCAATGTT
TAAATCTTACGGTAAAGTGTTGCTGAGTATGCAAAATTCAAATTGTCGTG
TTATTTTGATAGATGTTTTACGTGAAGAACGTGTTTGTGAACTTCCATTG
CAGTATCCAGTATCTTCAATCAATTTGAATTGGAATATGACAGAGATGGC
AGTCACTAGATGCAACTCCCATaaccacttttgtttttctgtttatAAAT
TACCAGCTATAGACTTGTCTCTGAAACATATATCAAGAGTagcaattttg
acaaatttttcattCGATTTTTTAGTGAGCTGCTCTTTGCCCACAAGTCT
TAAAAGaaaaaataataattaacaataaaaaaaactgaTAAATAATGACA
TAACAGATCATCAATTTGGTCACACCATCCTCAAATAAAATCGATTGGGA
AACTTACATTGAAATTTCGACTTAAAGAGTTCGACCATGGCACAAACATC
AACAGACAACACAAGTCCAGTACCTAACCTTGCTTTTCAATCCATTATTC
GACCTGCACTGGCTGGGttgtcAAATGATGGGAAGTCACATAAAGAACTT
CGATCTTCATTGAACGAACTCATTCAGGCTTTCAAAGTGGCAGAAGAATG
CATTCCTGGAATCACTCAAGAAGTACTTGCTGGTATTTTACGTGCagATG
GGTACTCGATGAATATCAATGAGATCTTGTTACGATGCTCCAACACTGTG
ACTGACAATTTTCAAATCGAACGAGCGGAACCTGAGTTTGTCAAACTGGA
GAAAAAAGCGAATGaattgaAAACGATTCTTGGCAAGATACCAGACGACA
TCAAAGATCGAACAAAATTCCTACAAACAATCAAAGACATTGCAAGTGCA
ATCAAGGAGTTATTGGACTCTGTCAATCAAGTCCTTAAAACTTACCAAGA
TCAAGGGAGAATCAAAGAATATCGAAAGactTTGGAGCAGAATAAGCGAG
AATTCGTAAAGTATTCAAAAAGCTTCAGTGACACGTTGAAGCAATACTTC
AAAGACCAAAAgcaGAACAGTGTATTTTATAGTGCAAACTGTTTAATCAA
CCAAACCAATAATATTCTACTCGTTTTTCGAATGGTTGGGAAAAATTGAA
CACGTGTGCAACATAAGACAAATTACCGGACAGTACAACAGGACACATTT
TGTTCTTCATTCTTcatttgtttgttattgttgaTGTTTTACTGAAGAGT
CAAAGAATTGGTTAAAGCTGTTGTACTAACTTTCAGTGGCGGATCTGAGG
GGGGTTCCaaacaatgaagtataagcccgaagggctagaagtcaatctct
ttggtaggatttgaagccaacaaatccaaagttgcgcggccttgagcgac
ccgcctggtttttacacaaatgacagattaattttgaaaaatatatcact
cgaaaacaaaggaattgctagattcaatccgtcatcaaaaatacggcgca
tattttaaggcttcaatttttcttgcctgagaaaggttagagattgacct
ctagcccttcgggcttgaaactcaatggttccaAATTTACGACGGAGAGT
CTTCAATTACTTTTAAGGAGTATGGCCAAAAAACCCTCTCCATCATATAT
TTTGAGCCCCCTTTAGATCCGCAACTGACTCTTGTACCGTATACAGTATC
TTGCTTTGTAACGTTGAACGGTTATTATTGCTCTGGCTTTGTTGTATTGG
CACGGAGTTTTTCCTTGTAAACTTCAAATTGTACAAACCAAACAAAATGT
TGACATTCTTTTGGCCCACTGAAATATAAAGTACCTCTGGGAACGGTAAT
ACAAACATTTGCCTGAGCATGTCATCTGATATGGATCCAGTGGTCGAAAC
TTTTGTAGATGTAAACTCAGGTTACAGAAGTGGAATGTGTCATATCTGAG
TAATTGTGAAAAGTAAAAACTGGTACTACTTTGGATATATTGTCcttttt
catttccaaaaatatactgcAGCAACCTGCTGACTGACATCGCATTCGAA
CTATGGGGGTGTTTTGGCCTAACGTAATGTCACTGTATCGAGTGAATGCA
CTAAGATGCACTATTGGGAATGTCTtgtaatatttaaatttttgtatatt
ttaatgaattatgcgtgtttttaaagatttgtaTATCATAAAGTAATTAA
GCTTTTCACTTTTTCCTCAGTTCAAAACctttcattttttgtaaacaCCC
CCTTTTCGCTGAT
Run BLAST on NCBI

transcript from alignment at scaffold_486:267830..280868-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068633 ID=TCONS_00068633|Name=TCONS_00068633|organism=Clytia hemisphaerica|type=transcript|length=13039bp|location=Sequence derived from alignment at scaffold_486:267830..280868- (Clytia hemisphaerica)
ATTCTACTGGTAAATCATTCTCAGTTTTGGACTTTCCATCTGAAAACAAC
CCTAAAATTCATGTTTTGGAATCTAGTCCTAAAGCAGCAGTTTGTGATGA
CATATTGACACAACAAACTTTAGAAATATCCAACCTACCTATTTCAGATC
GTTTTAATAGTTGTTTATATGATTCTGAATTGAACTGCTTATTCATTTTC
ATCAACAACCGTAATGAACACCACCTTGGATTAAAAATAAATATTTTTGG
ATTCTGGTTAGATTCTTCAAAATATGATTCTTCAGCATGTATCGTATTCA
ATCCAACGTCTACAGTAAAAATGTCTTTGGATATTGAGGGTATTAATCTT
TACACCAAATCCTTGGTAAAAGCTGGACAAACCCATTACATAGCACTTTT
TGCCCGCGGACTGAAATACGGTTTCAAGTCATATCAAGTTGATTATAGTG
AGGGACCTGTCATTCACCTCATTCAATATAATTCTGCACGTAATAGTTTC
TTACATCATCAACAAATCCAACTTGAGGTTGGGATCGTGGAAAATAATTT
AAAAAACTTGGAATTGTTTTTGGACGCAACAGCATCAAAAATTTATCTCC
TTGAGCCATACTCTCCTTATGTTATGAGAGAATTATCAAGCTCCGGCGAA
AAGCTTCACACCTATGAAGTGCAAACTGAAAAATATGTTGACTTTATAGA
ACAATGCAGTAATTCAACTTTCCTATACGTCACCGAAGACATGATTGTCT
ATTTAGTCAATCTTTGTAATGGTAAAATTCATATTTTAAAAGAATTTTCA
CTTTGCATTGGCGTAGATGGAATTCAAAGATTTCGTTTGTTTTCAATGTT
TAAATCTTACGGTAAAGTGTTGCTGAGTATGCAAAATTCAAATTGTCGTG
TTATTTTGATAGATGTTTTACGTGAAGAACGTGTTTGTGAACTTCCATTG
CAGTATCCAGTATCTTCAATCAATTTGAATTGGAATATGACAGAGATGGC
AGTCACTAGATGCAACTCCCATAACCACTTTTGTTTTTCTGTTTATAAAT
TACCAGCTATAGACTTGTCTCTGAAACATATATCAAGAGTAGCAATTTTG
ACAAATTTTTCATTCGATTTTTTAGTGAGCTGCTCTTTGCCCACAAGTCT
TAAAAGGTATCTCGAAGTCATTTGAGTTATATGATGTATTTTTTNCCCAC
AAGTCTTAAAAGGTATCTCGAAGTCATTTGAGTTCAATGATGTATTTTTT
GTATTTTTTGATATTTCAACTGGTAGTTATAGTCAACTCAAGTTTGATTT
CAATTCATTATTTTGTCTCTTGACACACGTTTTTTTCACTTTCAAAAGAA
AGCAACTGATTAATTTGTGTGAATCTTTACCTCCATGCTACCCTAGTGTC
AGCAACGTTTCCAGGACTTTTCTTTTTTACTGCACGTTTTTTATAAAATA
ACCCTAAATTTTTGACGCCTTCAGATGTTCTTAACTTTTCATAACTTAAA
ATTTTCAGCTTAAAAATGTTCTACGCATGTTCTTCTTTCCACCATTCTTT
CCGATTTCCTAAAAAAATCAGGTGTTTTTGAGTCCGCAAAGCCTTGAAAT
GTTCTTTAAAAATTTGTTCTTATTAAAAAACGTGCATTGTTTCTTGTTCT
GAATTTTAAACACCATTACACTATTGATTGTATATAAATGACACAACCTT
TATACTCATTCAACTTCTTCTCTTTTTCAGAAAAAATAATAATTAACAAT
AAAAAAAACTGATAAATAATGACATAACAGATCATCAATTTGGTCACACC
ATCCTCAAATAAAATCGATTGGGAAACTTACATTGAAATTTCGACTTAAA
GAGTTCGACCATGGCACAAACATCAACAGACAACACAAGTCCAGTACCTA
ACCTTGCTTTTCAATCCATTATTCGACCTGCACTGGCTGGGGTAAGAAGA
CATATAAAAATATAAGATAAATTTCATTTATTGTTTATATTTTGTGCTAT
AATACCTTCTTTGATTATTGAAAATAATGACTTGAACTGGTTTGACAATG
CACGTCAATTATTTTTAACAGTTTCAAGGGACATAAAAGTACTGACGAAA
TTTGTAAACTAACTGTATGCAGCAAAATCAAAACAAATGTCACATGTCAA
AATGAAAAACATAGCTGATTTTGAATGTTTCAATTGTTTTACAAGTTTGT
TTTGGACACGTGGTTCGCACAATGTTTACATTTTACTGCTTTTATGTCTC
TTTAACAAAACACTGTTCTTTATATTGTTTGTTTGTTGTTTGATACTGTT
AGATTTGGTTAATTAAAAACAATTGAATTTTTTTTTTTTTTCAGTTGTCA
AATGATGGGAAGTCACATAAAGAACTTCGATCTTCATTGAACGAACTCAT
TCAGGCTTTCAAAGTGGTAAAATAGAAATAATTTGAAATAAATGTTTTTA
AAACCCTTTTTTTAAGTTTATGTTCTATCCCAAATTGACATAGTAACCCC
CTTTCTAAAGCCTCCCTTTAGGGGTAGAGTCTCCCTATAAGGGAGGAGTA
GGGGAAAGGGCCTTATAAACTAAAGCCTCCAGTTTTACTTTTTTTGTTTC
TGATTAGTAAAATTTCCTTATAATAATGTTTTAAAGGGATCATCATTATT
GATGGACACTGAAAATGGTGGTTTTTCAGTAGGTAGATTTAAGGGATGTC
CCCGTTATTTAATTGTCTCTAAATACAAAAGTCACCGAACCTTAAGAACA
CTAATTAACTCCAGCAATTTCCTGATAGAAAAGAAAAACTGAGACTGAAT
GTTGTATTTCCCTTACAGGCAGAAGAATGCATTCCTGGAATCACTCAAGA
AGTACTTGCTGGTATTTTACGTGCAGGTTTTTTTTGGTTTTTTTTTTATT
AAATTCTCTTTTAAAACAATATCCTCTACTTTAGGCTATATAACAAAATT
TACACTTTCGTTTTTGATTAAAAATAAAAGCAACAGTTATATATGATAAG
ATATATAGGGCACTGAAATTTAAGAAAAACGGGATATCCGCTATGCCCTA
TGGAGGAGAGACCGATCTTGCCAGCGGGGCCTATCCGATGTTCGAAAGCG
GTCTTGCCTCCAAAGGCCTAAGTGCGGACCCCACAATAGCCGAGTGGCGA
CGAAAAGAGCCAGGGACTTGGAGTTGAGATTTTTTTCGGACCTAGACGGA
CAGAAGACGAGGATTCAGAATATTCAGAACTTTACCATATGGTATGAAAT
TTAAAATTTATCAGCAAAAAGGTTATAATTTTGATCATTCTTCTGTTTAA
GAGTGCCTTCTTCAATTAATGTACTATTCTATTTAATTGCCATACAGGGG
ATCATAGTGTCCTCCCCCCCCCCTTTATAAAGGGGGGGGGATTCTGATTT
TGGCCCTTTTTTTAAAGTATGGGGGAAAATGAAAAATTTGAANATAAAGA
GGGGGGAAAACCATAAATTTAGGAGATTTTGACTGGGGGAACTTCACTGA
TCTCAAGCTGATCTTGTGGCAAAACCTGTTTAAGCAATAAAATCAGCAAA
TCTTTTGGGATAAACCAACTTTTCAATACAATTTCATTTTTCCAGCACTT
TCAAGGCTATTTTTTCAAGCTTTCCAAAATTTCAAACTTGATTTAAGGCA
TATTTATGTTAACCATATGGACCATATGGGGAACCGCAAAATCTTCAAAT
AGCTGGGGGAATTCAAAAAAGAGGGGGGAACCGAAAAATTTTGAAATATG
GTGGGGGAAATAAAAGAGGGGGGAATGGAGAAAAATTTTGATTTTTAGTG
GGGGGAACCAACCCAGGAGGACACTATGGGGGATAGGTGAGCCTTTTCAA
GGCAAAAAACATTTAAGGTTCGGTATGAAATTTAAAATTTATCAGCAAAA
AGGTTATAATTTTGATCATTCTTCTGTTTAAGAGTGCCTTCTTCAATGAA
TTTACTATTCTATTTAATTGCCATACAGGGGATAGGTGAACCTTTATACT
TTGTTGTTTTTAGATGGGTACTCGATGAATATCAATGAGATCTTGTTACG
ATGCTCCAACACTGTGACTGACAGTAAGTATTCGTGATATGTACCATTGC
AATGTCTTCCACGGACCCAGCAGCTGATTGGTTGCAAGTGACTTATTGAC
TGATTTTAAGTCACTTACAGCCAATCAGCTGTTGGGTCCGTGATGCAATA
TCAGAAAACATTGCAATGGTGCATATCATGAATATAGGAAGACTTCTAAA
CCGTTTTGGTACTTTTCAGCATTTAAGATCGCTACCCACTCTGTCTTTTG
GTCGCCGAAAAACGTACATGGCTCAAGCGTTTTGGTCGCTGAACGATTTT
CTTATTCTATTGGTACAAAATCAAAACAGAAACACAGACAAACAAAAGCA
AAAACAAATTAGATGATTCGAATGTTTTGCTTTGCTTCTCTCTGATTGGC
TTCACATATCTGCCCAATAAGTAAAATATTTTCAAATCTCGTTATTTTCA
AAGCAACGAGCCTAAAAAAAGCTTAATTTATTAAATTTATGCAATAATTA
AGCCTTGCGGATTGTTCTTCGACCAAAAAAAAGCTGATTGGGAAGCGATC
TTAACTGCTGAAAAGTACCTCCTTCACTAAGAATTAGTATGAAGTATGGG
TTGAGCTTTTACACCTGGTTCGGATGACATCAAATTTCTGAAGTCTTTGC
AGGTCTTTGCTCAAAGATCGAAAATACCTTAAATAAACTCTAGATAGAGC
AAGTTCGTTCCTGGCTGAAGCAAAATAATACGTCATCATTACAAGTAGAC
CACAGTTCAATGTTGACATTTTGGTCAATCAAGACCAGTCTCTCTCTATT
CTCATCATGCTTGAATTGAACAAAATGATTATCGGTACTGAACTGTGATC
TGCTTTGTGTAAATACAGCGCATTTTTTTAGTTCCAAGTGCCGTTCCTTG
GGCAAGAAAGTGTAGATCTATCTAGTGTTACATAAGATTTATTTATTTAT
AAGTTCATGTAAGATGTTTAAGTTGACCAGATACGGATATTTTACGCTAT
CGATACCAACTATCGATACCAACTATCGATACCAACTATCGATACCAACT
ATCGATACCAACGATCGATACCAACTATCAATACCAACTCAAACCCCTTA
CAAAATCTCAATTGAATATTATCCTTTTACGCTTTCTATTATCCTTTCTA
TTATCCTTTCATCGGATTTTTCTTAACCAATCTGTACTTGACTTATCCCA
TTTCTTTCAGATTTTCAAATCGAACGAGCGGAACCTGAGTTTGTCAAACT
GGAGAAAAAAGCGAATGGTATGCATATTTAGTCNCCATTTCTTTCAGATT
TTCAAATCGAACGAGCGGAACCTGAGTTTGTCAAACTGGAGAAAAAAGCG
AATGGTATGCATATTTAGTCTTCATTTCATTTTCGTTCACTGTTTTAAAT
CAAAAAAAAGTTAGAAGAGACTGTTTAGTTGATATTACAATTTATAAGTT
TATTAAGAATGAAATTAAAGATTGGAAAAAGAGATTTTGTCATGTCAATT
TTATTGCGTTCATGATATTCTCTTGACCGACTATGATATCGTTTTATAGT
TCATAGTTTAACGATCCCAAAACTTCCGATGATGGAAAGAGACACCAGCA
TAAATATTATAATCATGTGGTATTTAACTTAAAGAGTCTTTATATTGTCT
TTTGATTTTTCAAAGTTCTGATTTTGAATAGGATTATGAGATGATTCAAT
TTATTACTCGGATCGTTGCGTTTGGTTTATACGGTTCTTATTCCTGCACT
TTTTAAACCAAACCAAAACATTTTTGTTCATAAATACATACACAATAGAA
TTACTAATCCCATCCAAATAAAACCAAAAATAACTGTACCGGAAATCAGT
AGCCAGGCTCTCTAACAGTTGTGGTAGTGTACCAAACATGAAAAACGATA
GACATATAATGAAAGGTGTAAAAATCTTTGCTTTTCGTTTTCTGTATAGC
GAAGACCGTATATCGCTAGTTGCTTTTCGATATTTGATATAAATGTATGT
ATAAACGGCGACAAAGATAATGTTTGTCCCGAATAAACCAATGGACGGAA
TAATCTTTTGGATCACTTTCCATACTACTGAATCAAAGCTTCCCATGAGA
TATACACACAGGGTTGCTGCTGAAAATAGAAGGGATGCCATCCACGTGTA
AAATACATATTTCACTCTGTGTAAATAACAGCTCGAAGTTTCATAACTCA
AGTGTAACCATATAGCGAAGAATCTTTGCAGCGTCACTAGTATCATACCA
CTGTACAATGGAATCGTGAGTGAGATAGTGAGCCCACCAGCTAGTCTAGC
ATATTGTGGATATTTGACATAGGTGGTTATGCGAGTCATTGAAAAACAGC
ATAGAATGATGAAGGAAAGCGAAATACTGAGCACCTCGATATTTTCTCTG
ACTTTGGTGTTTGCATTAAGTAGAAACCAAACGCCAGTGGCGTGTAGAAG
TACAGTTAGTAAGGCCAACGCGAAAAGCAGTATAGAGAGTGTGTCCCAGC
CTGCCATATCTTCTTTGATTGTTTTATGTTTTTTTTTTTTTGCGCTGATC
GCTTCTCTCCTGACTCAAGTGCGAAAAGCACGCATAATAGAAATCTTTTT
GTTAAAATGCGCTCTTCCAGAAAATATTCGTACATGGGATTATATTGTCC
GGTGGGGGATGGTAGGGAAAAATCTACAAAATTTCCCTTCTTGGGAAAAG
CTGTTCTGTTTAGGGGTACTTATGACTGTCCGGGGGGTCAACTGATGCTT
GTCCAGGGGGTTAGCTGTTTTCCGGGGGGGGTTAAAAGTCACAAATCCGG
GGAGAAAATTTCCAATCCTCCAGCCCCATATTCGATTTTTNTGTGGGGGG
GGGGGGGTTAAAAGTCACAAATCCGGGGAGAAAATTTCCAATCCTCCAGC
CCCATATTCGATTTTTCTGGAAGAGCTCAATGTTAAAATGATAAACCTGG
AGGATTGGAAATTTTCTTCTTTTATGTCTTCTCAACACTTCTTCCCCTTT
TCAAGGTCCCCAACTCTTTACAATCATGAAAAAATATCGTAATTTGAAGA
TTGGAATATCTTTTTGCTTTACGCTCAATAATTGTTTTTTTCAACAATAT
TTGCTAAAAATTCCCTTTTTCAGTAGTTTTTGATGATATGATTCTTCAAA
GAGTAAAGCAATATATAGAACAATAAACAATACTGTGCGAGAAATATTAT
AGTATTGCTTTTTTAATGAAAATTTTTTACTTGAGCTCGAAAACACATAA
AATTAACAATGCTTCGATTTTGGATCAATTAAAAATCCTTGATAATTCAA
AAGATAACCTTGTGCTCGACACTTACATTTGAGGCCTCTGCCCGATATCT
TAAAATAAGTATTGCTTAAGTTTGCTATTTCAAACTGTTGGAATAGATAG
TTAAATTTTGGTAATAGATAATTAAATTCTGATAACAGATTTTTAAAATC
CCTTGCCTAATTCAGATGTCTAATGTTATGGAAGTAATATGGTAGCAATA
CTGAGTATCTTCTTATTCAATTTATCTTAAGTGTAGTATTACATATGCAG
GGTGATTAATAAAAAACCGCACCTCTAGATTTTTTGACGTAACTATTTTT
CTGTTCTTCGTATTGTCATCATGAGACATTCAACACTCATACCCTATTAG
ATCTGGGCCCGGTTGTTCAAAAGTGGATTAGCGGCCGATTAGCTTAAGTC
CGGATTAAATAGCGATTAGCGCCGATTAACGAAAATTTGTCTGTTGTTCA
AAAAATATCACGATTAAAAAAGGGATTAACTTAGACTTAAACACCCCAAA
ACTTAATCCTGCTCGGGAGGTGGATTAAGGAAAGATTAAGCTTAAAACAA
AGTGAGAAATGGCCGCCATGAACATGATTTTATATGGAAATTTGCAAAGA
AGACGTCCAAGAACGGGAGTCTACACATTAGATTTGAGGTTTATAGCTGA
ATATTTTGTGACATCTAATGAAAACAAAAGATTTTGCCACCGCATACGGA
CTAAAACTAATGGGCGATTGTTGGTCGCTCTTCATATAATTGTATTATAA
CTTTACACATTAATTATAACTTTGTATATGTAATCACATGATAACGAGTG
CAATTCGAGAATAATTGCACGAGTGATTTTTTGGACCTACCCCGGTGGGG
TGAAGGTCCTATAAATTCACCTCTGTCCGTTCGTCCGTCCGTCTGTCCGT
TCGTTACCAGCTTTTCTCGAGATTGAATCATAGGAATCATTTGATTTTTG
GTACAAAGGTGCAAAACAGTAGTGGCCAAAATGTGACGGAGCCCGATTTT
CGAAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAAAATTGGA
TCATTGAATTTTTTTGATTTTTTGCATGAAAGTAGGGTACCATCATAGGT
AAAAGATGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCAATGTTCTTAGTCAAATTACTC
AATTTCTTTATGAGATAGAAGTTTTTTTTGCTCATGAGGGCTTACTTTTG
AAGAATATGTGTGTTTAGACATGAAAATTTGGTTGCTTGTTTGTTATTAA
TTTTCCGAGTACGAAAGGACGAGGAAAATTCGAAACAAAAAAATCACGAG
TGCAATTTTCGAATTGTACGAGTTATTATGTGATTACGAGCTACACGCTT
TTTCTTTTATAAGAATAACTTCTATAAGAATATCAGGGTGAGATTTCGGG
TTTAAAACAATAGGCCTATTGTTTAGAACAATAGAAAAATAAGAATAATG
CTCACCCTCAACCAAAGTACACTATTCTTATAAAAGAAAAATCGTGTAAT
CGCACGATTTTTTTTACTACTTTTTCCCCGTCAGGAAAGTAAATTACACT
GAAAGTTTAATATTTTTCTCTTCTCTTAATGTTTTCCTTTCCTTTTATTG
TTTGCTTAAAGATTTTCTTTCTCGCAAAATGATTTCGAATGCAATTAAAA
CGTTCGATAAAAAAATGTAAGAAAAAACATTAAGATCAATTTTGGAAACA
TTGGCGCTTCATTGAAGAGTGTGATTGAGTGTGATTAGCGATTAATTGCT
CTCTTTGAAGGCGCGCCAAAGAAGAAAAAAATAACTCATCGTGCGATTAA
CACATTAATTATATCTTTACACGTTAATTATATCTTATCTTTTTTTTACA
GAATTGAAAACGATTCTTGGCAAGATACCAGACGACATCAAAGATCGAAC
AAAATTCCTACAAACAATCAAGTTAGTCACTTGTATATTCATTTATAGGA
AAGGTTCTCTCTACCAGACTTGATATTTGCCAAATCTTTAAAATTTCCCT
GTAGGATTTCATCTTTGTCTGTTTCTGTTTCTGTTTTTAGATTTCTCAAA
CAGGTCCTTCGTCATTTTCTAGCCTCTAGCGGAATAGGGCTTTGTCTGGA
CGACGTTAGATTAGTACCGGTGTAGGGCTGATAAGGCACATTTTTTAACT
TTGCTTATTCTACTATACATTAGTTTATACACATCTTTAAAAATGCTTTT
TGTAGATGTGATCAAATAAATATAACAATAGCGTTCAGTTTGAAGTCGTT
GTTGTTATTTTCTGCCCGCATAGTTGGGCCCGACGCGAAGCGGAGTGCGC
AAATGGCACTAGAGGGCTAATAATCAAACTGCAAGGGCAGAACTAATGAC
AACAACGAACGAAAACTCAACGCTATTACTATTATTATTCATATAGGACA
TTCAAACAACCTTTTTTTCTAGCGTCAACCAAGTCTTTTCGCTTCAATGC
AATCGCTTCAACAAATTTTTAGCACCTTGCGAGTGGGCCGCAAATGACCA
AAAAGTGTTTTTTTTCTGACGCGGGCCTGCAAATGACGTTATTGCCCTAT
ACCCTGGCGCTTTAGTTTCCTCAGCGCGGGTATGACAATTTGAGTCACAA
AACCTTTCAATACCGCCCGCCGATTGAACCTTTAATGACTTACTTAATGA
CCGCTATATGGATAATAATAGTTATTATGCTCTGCTTCATCTTGGAATCA
AACCCAGATCCATTGCTGGGAAGGCAATAATGCTAACCTTTGCACTGCCG
ACACAGAGAAATTGCTCAAACATTAAGAGAAACAACCTTGTTAAGACTTC
GTGACTTTTGACACCATTTTTCAATTCTCATTATTTCATTATAGAGACAT
TGCAAGTGCAATCAAGGAGTTATTGGACTCTGTCAATCAAGTCCTTAAAA
CTTACCAAGATCAAGGGAGAATCAAAGAATATCGAAAGGTATTATTGGGG
TTATTTCAAATTTACATTATGAAGCGATGGCCGAGTTGTCAAAGACGTCA
ATGTTACAAAGATAGGGTTCTCGACTCTGTACACTTATTTACAAACATGT
AGCTTTTTATTCTAAGGTTATGGTCAAGAGCCCAATTTCTCCTACCCCTC
CCTTGCCTAAGATAACTATGATGTATAAAATACCTCTTGAAGTGAAAACT
GCTAATCTTTTGGGCAAAATACAATCTTTTGGTGGTTGTCCATCAAAAAT
TTTCCAAAGCAAGAAGAATATTTTTCAGCACTAATGAGATACGTCCGCCA
TGTTGAGACTTGATTATTACGCACAAAAAAGTCCCTTCCAATGTTCCGTT
CCGTCGTTCCGTTCACCCCGTAAGAACAATCGAAAGATTGTCTAAAAGAT
CTAGATTACTGGGTTATCAAACGTGAAATATAGACTCTATCTGACTATTA
CCAAATTTTCCTCCTGGTATTCGGATTACCCATATCAGTGATAATTCAAC
TGCATAGTTAGTTCAAGCTACATTCTGGCTTGGGTAAAATAAAGTTAAAA
AACAATACCGGTTTTGAATGGGTGGTGAATATGAATTATTCGTTGTATAA
ATTATAACTCCTTCAAATCTTTCAGCCAGCATTATTTAAAATTTCATTTT
ATCTTTTATCAAACAGACTTTGGAGCAGAATAAGCGAGAATTCGTAAAGT
ATTCAAAAAGCTTCAGTGACACGTTGAAGCAATACTTCAAAGACCAAAAG
TAAGTCTTGAAAGTTTTAAATAGTATGATTGTCCCCTTATATACAGATTT
GATTCCTAATATCAGACCTGTCATAACTGGCAAATTCATTGTAAAATTAT
GTTATTGTAAAATTGATGACAAATACAAGATAAAAATTCCTCCTGTAAAA
TGGGAACATTGCCAGTAGGTCTGGCGTTGGCTAAATAGCTGCCGAAGACA
TCAATTTCGATACAAGGCTTCGCCTTTTACTAACCGGTTGACGTAGGCTG
TACTGAAAAATGTTGCCCGAGGTCCAGTAACGACCGAGCTTACAAGGACC
TGATTTGGAGCAGTCTTGCGATAAACAAGTGCAATATTTTCGGTAGAGCC
CGAGTCAAACCGGTAAATCTTGTATTTGTTAGCCGTGTCCTGTTGACAGT
TGGTTCTCGACCAAAGCTAAGTAAAACCACGGTCTCTTGAACTTTCTTAC
CTTCAAGGGGATATTTGGATGATTGGTACGCGGCTAATTAGTACCATTTC
TCACTTGAGCTTGTACAGCAGGTTAACATATATACACATTTGTGTTGAGT
ATTTTTTTTTATAGAAATATCCTTTTTCATTTTTCAGGCAGAACAGTGTA
TTTTATAGTGCAAACTGTTTAATCAACCAAACCAATAATATTCTACTCGT
TTTTCGAATGGTTGGGAAAAATTGAACACGTGTGCAACATAAGACAAATT
ACCGGACAGTACAACAGGACACATTTTGTTCTTCATTCTTCATTTGTTTG
TTATTGTTGATGTTTTACTGAAGAGTCAAAGAATTGGTTAAAGCTGTTGT
ACTAACTTTCAGTGGCGGATCTGAGGGGGGTTCCAAACAATGAAGTATAA
GCCCGAAGGGCTAGAAGTCAATCTCTTTGGTAGGATTTGAAGCCAACAAA
TCCAAAGTTGCGCGGCCTTGAGCGACCCGCCTGGTTTTTACACAAATGAC
AGATTAATTTTGAAAAATATATCACTCGAAAACAAAGGAATTGCTAGATT
CAATCCGTCATCAAAAATACGGCGCATATTTTAAGGCTTCAATTTTTCTT
GCCTGAGAAAGGTTAGAGATTGACCTCTAGCCCTTCGGGCTTGAAACTCA
ATGGTTCCAAATTTACGACGGAGAGTCTTCAATTACTTTTAAGGAGTATG
GCCAAAAAACCCTCTCCATCATATATTTTGAGCCCCCTTTAGATCCGCAA
CTGACTCTTGTACCGTATACAGTATCTTGCTTTGTAACGTTGAACGGTTA
TTATTGCTCTGGCTTTGTTGTATTGGCACGGAGTTTTTCCTTGTAAACTT
CAAATTGTACAAACCAAACAAAATGTTGACATTCTTTTGGCCCACTGAAA
TATAAAGTACCTCTGGGAACGGTAATACAAACATTTGCCTGAGCATGTCA
TCTGATATGGATCCAGTGGTCGAAACTTTTGTAGATGTAAACTCAGGTTA
CAGAAGTGGAATGTGTCATATCTGAGTAATTGTGAAAAGTAAAAACTGGT
ACTACTTTGGATATATTGTCCTTTTTCATTTCCAAAAATATACTGCAGCA
ACCTGCTGACTGACATCGCATTCGAACTATGGGGGTGTTTTGGCCTAACG
TAATGTCACTGTATCGAGTGAATGCACTAAGATGCACTATTGGGAATGTC
TTGTAATATTTAAATTTTTGTATATTTTAATGAATTATGCGTGTTTTTAA
AGATTTGTATATCATAAAGTAATTAAGCTTTTCACTTTTTCCTCAGTTCA
AAACCTTTCATTTTTTGTAAACACCCCCTTTTCGCTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042809XLOC_042809Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068633-exon-scaffold_486-1575043694:279713..280868TCONS_00068633-exon-scaffold_486-1575043694:279713..280868Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1575043694:278928..279138TCONS_00068633-exon-scaffold_486-1575043694:278928..279138Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1575043694:278453..278524TCONS_00068633-exon-scaffold_486-1575043694:278453..278524Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1575043694:277993..278050TCONS_00068633-exon-scaffold_486-1575043694:277993..278050Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1575043694:276796..276855TCONS_00068633-exon-scaffold_486-1575043694:276796..276855Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1575043694:275465..275521TCONS_00068633-exon-scaffold_486-1575043694:275465..275521Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1575043694:271398..271467TCONS_00068633-exon-scaffold_486-1575043694:271398..271467Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1575043694:270381..270474TCONS_00068633-exon-scaffold_486-1575043694:270381..270474Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1575043694:269620..269702TCONS_00068633-exon-scaffold_486-1575043694:269620..269702Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1575043694:267830..269031TCONS_00068633-exon-scaffold_486-1575043694:267830..269031Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1510915933:279713..280868TCONS_00068633-exon-scaffold_486-1510915933:279713..280868Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1510915933:278928..279138TCONS_00068633-exon-scaffold_486-1510915933:278928..279138Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1510915933:278453..278524TCONS_00068633-exon-scaffold_486-1510915933:278453..278524Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1510915933:277993..278050TCONS_00068633-exon-scaffold_486-1510915933:277993..278050Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1510915933:276796..276855TCONS_00068633-exon-scaffold_486-1510915933:276796..276855Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1510915933:275465..275521TCONS_00068633-exon-scaffold_486-1510915933:275465..275521Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1510915933:271398..271467TCONS_00068633-exon-scaffold_486-1510915933:271398..271467Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1510915933:270381..270474TCONS_00068633-exon-scaffold_486-1510915933:270381..270474Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1510915933:269620..269702TCONS_00068633-exon-scaffold_486-1510915933:269620..269702Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1510915933:267830..269031TCONS_00068633-exon-scaffold_486-1510915933:267830..269031Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1491911889:279713..280868TCONS_00068633-exon-scaffold_486-1491911889:279713..280868Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1491911889:278928..279138TCONS_00068633-exon-scaffold_486-1491911889:278928..279138Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1491911889:278453..278524TCONS_00068633-exon-scaffold_486-1491911889:278453..278524Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1491911889:277993..278050TCONS_00068633-exon-scaffold_486-1491911889:277993..278050Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1491911889:276796..276855TCONS_00068633-exon-scaffold_486-1491911889:276796..276855Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1491911889:275465..275521TCONS_00068633-exon-scaffold_486-1491911889:275465..275521Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1491911889:271398..271467TCONS_00068633-exon-scaffold_486-1491911889:271398..271467Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1491911889:270381..270474TCONS_00068633-exon-scaffold_486-1491911889:270381..270474Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1491911889:269620..269702TCONS_00068633-exon-scaffold_486-1491911889:269620..269702Clytia hemisphaericaexon
TCONS_00068633-exon-scaffold_486-1491911889:267830..269031TCONS_00068633-exon-scaffold_486-1491911889:267830..269031Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_486supercontigscaffold_486:267830..280868 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.207	10.157	9.65821	9.68119	6.82219	4.80026	9.88384	9.81866	6.79532	5.20267	5.15477	4.21891	3.61194	3.22139	4.69968	4.35609	6.03553	6.54661	4.33181	4.93028	6.37819	6.79805	7.59177	6.91468	4.14566	4.6681	6.07163	5.09654	4.77264	4.62375
Blast
[Close]
BLAST of TCONS_00068633 vs. Swiss-Prot (Human)
Match: PDC10 (Programmed cell death protein 10 OS=Homo sapiens GN=PDCD10 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.412e-50
Identity = 99/179 (55.31%), Postives = 118/179 (65.92%), Query Frame = 3 
Query: 1404 SSLNELIQAFKVAEECIPGITQEVLAGILRADGYSMNINEILLRCSNTVTDNFQIERAEPEFVKLEKKANELKTILGKIPDDIKDRTKFLQTIKDIASAIKELLDSVNQVLKTYQDQGRIKEYRKTLEQNKREFVKYSKSFSDTLKQYFKDQKQNSVFYSANCLINQTNNILLVFRMVG 1940
            S+   L  AF  AE+  PG+TQ+++  IL      +N  E LLR +    + + IER EPEF  L +KA  LK IL KIPD+I DR +FLQTIKDIASAIKELLD+VN V K YQ Q      R+ LE  K+EFVKYSKSFSDTLK YFKD K  +VF SAN LI+QTN IL  F+ V 
Sbjct:   39 SAAQTLRAAFIKAEKENPGLTQDIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDEINDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQN-----RRALEHQKKEFVKYSKSFSDTLKTYFKDGKAINVFVSANRLIHQTNLILQTFKTVA 212
The following BLAST results are available for this feature:
BLAST of TCONS_00068633 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDC105.412e-5055.31Programmed cell death protein 10 OS=Homo sapiens G... [more]
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