TCONS_00068617 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068617
Unique NameTCONS_00068617
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length833

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068617 ID=TCONS_00068617|Name=TCONS_00068617|organism=Clytia hemisphaerica|type=transcript|length=833bp
TAAGTGCAAAAGTAAGAAACTAAACAAAAAAGGGATaaaagaaaattgtt
gaaatggATTTGCCAAATGAGCTCTGGAAATTAGTGATTTCTTACTTAGA
TCTCAAAAGTGCTCAGAATATTGCTCTTACTTCAAAGAAGATGCACCAGT
TGTCAATGATGAGGCTTTGGTCAAAACCAAGATATACCAAGAATACAAAG
GACATTGCATTTCTAcacaagatttcaaatttttctattCGTGAGTTGCA
CACCTCTGATTTCAGTTGTAAATGGCTTGAGATTTTAGGGTTGGTTCCAC
AACTTAGACTTTTACATGTTGACAATGCATTCAATTATCATTTTAAACCA
GACAAAGCTTATTTGCGTTTCTTAAAGATTTCTGTTATTGTTCATACAAA
AGCCTTAGAAATCTGGGAGAACTTTGAAGAATTGTTGGATATTTTGTGTT
CCATCAAAATTCAATCATTGGTTATTGATCACGATTCGAGGTATTATCAA
AGAGAAAATCTTCAACGTTATCTGACTTTCGAAGAATTTAAACTGCTTTC
TTCAAAAGTTTGTATTTCCGAGGTGCATACAGATTGTATCGAATGGGATA
GTGGAAATATCCTTGATTTTATTGAGTTGTTGTCAACCATGAGGGATTGC
AGTGTCTATTTATATAACCACAACCATTTATCTACGTCTTTATATACTGT
TAAACATTTGGAATTGATGGTAGCCCTTGAtatcaaaattgtttacattg
aAAGTGAAgGCTTGAATTTGGAAAGTTGCTCAATTCTATTAGAAATGGTC
AAAGTTATGATGAAGATGAGACATCTTAAAGAA
Run BLAST on NCBI

protein sequence of TCONS_00068617-protein

>TCONS_00068617-protein ID=TCONS_00068617-protein|Name=TCONS_00068617-protein|organism=Clytia hemisphaerica|type=polypeptide|length=260bp
MDLPNELWKLVISYLDLKSAQNIALTSKKMHQLSMMRLWSKPRYTKNTKD
IAFLHKISNFSIRELHTSDFSCKWLEILGLVPQLRLLHVDNAFNYHFKPD
KAYLRFLKISVIVHTKALEIWENFEELLDILCSIKIQSLVIDHDSRYYQR
ENLQRYLTFEEFKLLSSKVCISEVHTDCIEWDSGNILDFIELLSTMRDCS
VYLYNHNHLSTSLYTVKHLELMVALDIKIVYIESEGLNLESCSILLEMVK
VMMKMRHLKE
Run BLAST on NCBI

transcript from alignment at scaffold_486:20766..32397-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068617 ID=TCONS_00068617|Name=TCONS_00068617|organism=Clytia hemisphaerica|type=transcript|length=11632bp|location=Sequence derived from alignment at scaffold_486:20766..32397- (Clytia hemisphaerica)
TAAGTGCAAAAGTAAGAAACTAAACAAAAAAGGGATAAAAGAAAATTGTT GAAATGGATTTGCCAAATGAGCTCTGGAAATTAGTGATTTCTTACTTAGA TCTCAAAAGTGCTCAGAATATTGCTCTTACTTCAAAGAAGATGCACCAGT TGTCAATGATGAGGCTTTGGTCAAAACCAAGATATACCAAGAATACAAAG GACATTGCATTTCTACACAAGATTTCAAATTTTTCTATTCGTGAGTTGCA CACCTCTGATTTCAGTTGTAAATGGCTTGAGATTTTAGGGTTGGTTCCAC AACTTAGACTTTTACATGTTGACAATGCATTCAATTATCATTTTAAACCA GACAAAGCTTATTTGCGTTTCTTAAAGATTTCTGTTATTGTTCATACAAA AGCCTTAGAAATCTGGGAGAACTTTGAAGAATTGTTGGATATTTTGTGTT CCATCAAAATTCAATCATTGGTTATTGATCACGATTCGAGGTATTATCAA AGAGAAAATCTTCAACGTTATCTGACTTTCGAAGAATTTAAACTGCTTTC TTCAAAAGTTTGTATTTCCGAGGTGCATACAGATTGTATCGAATGGGATA GTGGAAATATCCTTGATTTTATTGAGTTGTTGTCAACCATGAGGGATTGC AGTGTCTATTTATATAACCACAACCATTTATCTACGTCTTTATATACTGT TAAACATTTGGAATTGATGGTAGCCCTTGATATCAAAATTGTTTACATTG AAAGTGAAGGCTTGAATTTTGAAAGTTGCCCAATTCTATTAGAAATGGTC AAAGTTATGAAAAAGATGAGACATCTTAAAGAATTCAGGTTTTATGATTG CGATTTTAAAACTGAATTCAGATCAGAAGTTGGATCACTTGTCGATTTAC CTATCAAGAGTATGTCCACTAGTTTCTTTGTGAGAGAAGAAGGAAAGATT GGAGACATCGTAGATACTCTATTACGTATGAAATCATTAAATCAAGTTAC CATCAGTGAGGCGTATGAGACAGATCACATGCTGTCACCTGAAGAATTGA TTTTGTTTAAAGAACTTCCTGTTAAGGAAGTTTTCTTAGAAGCCTTGAAT CTGACGCCCCAAAATATTCCTGAATTTCGTCAAGTCTTGAAACAAATGAA GATTGCTAAGATTCACTGGATCACTGGTTACTTTGAAACTCTGGGGTTTG AAGTTTCTGTTGAGGAATTTATTGACGAATCAAATGGTTTGATCTATAAA ACAATCGGGTAAATTCGAAACGAAGGACAAAGAAGCAAAAAAGAAAGGTT GCTCTTTTCCAGGAAGAATTTGAATATGGGGGTGGAGGATTTAACACTTT TTGGAAATTTACAGCAGGTTTCTACCCCACAATACCCCCGTCCCCGATCA AGCATTAGTTGACCCCCTGGATATTCAAAATTCAAAGCTAAATTACCCCT AAACAGAGCAAGTTTACCCCGAGGACACTCTATCCTCCACCTCCAATTCC GACTACAGTCGTACAATAATCATGGTTGAATCTAAACCAAACGCGTCACG AGATTGTAAAATGACCAATGGCAAAAGAATACAAAATTGTCAGCTTCACA GTAAAAGTACTGGCCTTACTTTTTTTACTTCAATTTAAGCACTGTTTATT CCTCTTAAATCTGTGGTATTTGATGGTTCTTCATAAATATCAACCCCTAG AGATGTTATTTCCGCTTTTTAGTATATATTGATATATTGATTTTTAGATC GCTCAAAGGAGGTTAAAAAGCATTCATATGGGCTTTTCTAGAAAAAATTG AATATGGGGGGTTGAGGATATAACGATTTTCAGTGATTTACCTCCCGGAC AAAGTGACTTTCGGCCCCCCAGACAACGAGCTTTACCCCCCGGACAAGCA TCATTATCCCCAAAATTTAATTTTTCGCTACCCCACGGACAATATATCCA CCACCCCCCATGTACGGACATTTTCTGGAAGAGCCCAATTGTCAAGTTTT GTCTGTTTGTTCGGTGTTTTGTTGTTTTTTCATTTTCATTATTTATGTTC TCTTTAGGCCTGGGAACGAAACTTTCACAATACTTGTTAAGTGCTAATGA GAATCGAATTCTATTCTTTTTAGATAAATTTTATTAGATCAGATTTATTT AAAAATTGAAAGAATGTTTTCATCAAATAAGTCAATGTCTGTACGATCTG ACCTCTCCAATGTTATTTTATCACCAGCCACACTTCTTGATGGATTTGAC AGATATGCTCTTGGAGGATTTGATGCTAGCGATAAATATTATTTGATTTT CGAAAATATTGGGATTAAGATTCAGACACACATTATTTAAGTTCGTTGTT CATTATGACAAAGTTTCAGAAAAATTCGTTACAAATCTTTTGGAAATTGG TCACCCTGTTCTTGGTGGTATAGTGATGGCAAAATTTTACCTTGTTAGAT TTTGAAGGAGTTAGAATAATTGACTGCGTTGAAAAAGAAAGCAAATTGAA TGAGGCATTGGTAAGAAAAATTGATCTGTATTATTTTAATCTGTACGAAT TTCTTATCCTTGAGAATCATGATATTGATCCAGATGATAAAGAGCATCAG CCAGATATTACCTTGAGCTATCACGCACTGGATCAAATAATGAAAAATAA TTTCAACTCTGTTACCAAGAAAATGATAACTACTCTCGTGGCAGTTGCCT AATTTCTGGCTCCTCGCAAATAATGTTGAATGCTTCTACTTTGACAACGA TTGACGAAAGAAATTAATTAATTATTCAATTCAGTTTCATGTTTCCACAT TTATCAAATGTAAAATTCACGTTAAAAAGCTAGAAAAAAATGAGTAAAAA GTGGGTGCATGGTGTCAGCCCCCCCCCTTAGAAATCTGAAGGGCACCTAG GCCAGGTTAGTAGAGGGGGGCTAATGCCTTGCAATTCTTTGGGGTTACCT ATTCATTAAGGGTACCTAGCTGTCTTGATGGAGGCTCTGGGGGGCGGTTA TATTTTCCAAATCGAAAATTTCAAAATATTTCAAATTATTGAATTTTTTT ACTAAACCACCCCAAAAATCATTAAGATTTTACCAATGACAAAACAACAA AAAGTGTCAATTCAAAAAAGATTTTTTTGGCTGAATTGGGGTACCTAACT CAAAGCAATTTCTCAAGGGGACCTAAATTGCTGGGGGCACCATGCTCAAT GGGGGCACCTGAAAAGTGTGCTGAAACCATGGGGTGATTGGCGTGATAAA ATTTATAATAGGTGTGTTAAAAAATTGTCATATAAACGCGTTTAAAAACA ATGAAGTGAATACTGAGGCTATTAAAATATATTTATTTATTTATCTATTT ATTATGCTTTGTCCGGTGGGAGACATTTAAATTTTTTTAGAACAAATTTG TTGCTATGGCGACATTTCGAAATCAATTCGGACCGTTATTTAACAAGGTC AAGTTCTGAGGTTATAACATGAAACTTCTATGTAAGACAAATGTTTCATC GCTTTGACCCATTAACATATGGCGGGCCGTGGTCAATTACCGACCAAGTT AGAGACGGCTTGATGTCTTTGAGTTGTAAATCCCATATATGGTTTGACAG TTCGATTGATTTTTTCATTTCTTCGTATTTGAAGTATGAGTGTAAAAGAT TAGATCGCTAAGTATTTGCTACAATATCAAATCAATGAGAGTCATGAATA CGCGCGTTTAATCTTTGTTGATTTTGAATTTCAACAAATGGTGCTGTGAT ACGAATGGGAAAAGCATTTTATTTATCTTGAAAGCCTGAGACTGTGCCAA AATTACTGTATATGCTAGTTTGCAGCAACCACAAAAGCTTTTTCTTGGAT TGGTGCATGATGCAGTTTGTACTACATACTGTAGTCTGTGACCATTGAAT CTTTAAAAATCAAATCTTGTCCGAGGTTCTTCTCCAGGAAGCTTATCTTA ATTGCTTCACCAAAACAGTGCTATTATTTTGATATGTGATTTTTAATTTC TTTTAGAATTAATATAATTAAAAAATCATCTTGTAGCAATGAAAACTGCA CTGCTTGGTTTTAATGATGATTCATTACCAAGAGTTCGATTAATACCAGA AAATACTGTTAACGTTACCCCAAACCATTTTGTTATCGAAGAAAAGAATA ATAACACTAATAATAACACTTTTACAGTATCTGAATGGACCAGTCAAAGT CATTTCATCAGAAACATTGTTTGGGTTTACAATGGAATCGATAATAGCAA TAAACTGACTTTAAAGTGTCGCAAAGGTTTTTACTATTCACCAGTAAATT CATTGAGTAGTGCCATCAACGCAAGTCATGATTTTGTTATTTTTCCAGTT GAGCATAAAAACAGGCGAGCTATATCTTTGACTTTATGTCAGTTAGTTGA TGATTTTAAATTTAACCCCGACATGGATAGAACAGGAAGAGACCTGGGAA CTATTTTTGAGTTAGAAGAGGAGCACTGTTACCTGAAAGACTTTGATATA AAACTATCAACGGATGAAAAGACTTTAAGTCTTATGGTCGAAACCTTCAA CGAAGAAAATAAGGAACACAAACGCGATGTTCATATATTCAGATCTCTTT TCTCTTCAGATAATTGTTTATCCTTGAAAAGAGTGCTGACCATCGACACA ATGTCAATGGGAGTTTGCCAGAATGATGTTGTTTTTAACATCAATGCTGA TAAAATACTCATGTTCTTAGTAGATGGTGTAGTCGTTTATTCCTTGCACA CGCAAAGTGTTATTGCAAAACATTATATCAAAGAAATGTACCTCCCTTTC GAATGGGCTCATGATTTGAAGCATGGTGAAATTTTGATTCATTTTGCTGA GGAACGGACCAAAATAAACGTTCATACAATTAATTACCTGGAGAAAACAT TGTCCTTGATAACTAAAGTTAATGTTTCAGATTTCATACCAAAACATCTC AGCTTCGATTTCCGTTGCCAGCAGCCATATTATCATCAAGTGACTTCTGG TACATCTTTATTGATACTGGCAAGGCGAGATGTTTATTTGATCGACCCTT TCACAGGTCATCTTTTACAAAAGATAATGTGTAATGTCAGTAGACCAAAT ATCTCTGTTATAAATGTCCAGTTGAATTGGTGTTCAAATGAAGTAGTGGT GTTTTATAGCGGGGTTGACAATAAATTCTTTTGGCAAGTTTTCAAATTGA AAACAAGGTTTGTGGAACCACTGTTACATTCTCCACTTAAAGTTGTATTG TTGAATTATTCCATCAATGATTTGGTACAATTGAACTTACCAAAGTCGAT TAAGGATAACTTTTTTAAATGATCACCTAAAATTTCGTGTATACTACAGT ACAAGGTGAGCAAAAAAGGTATGACCAGACAAAACTTCTATACCTTTCAT TTTTTTCTTATTTTACTTTTTTCTATAATTACTTGACCAATTTTATTTGT TTTGAATATTTTTGATGCACTGATCTATTTTGAATGTTTACTTGATTTTT TGTTGATCTAAATTTAGTACTATAGTGATTATTTAGGTTAATTTTATACA GATTATGTATGGTAGTTTGAAATATGAATTTATTATATACTGTTGGAAAG ATAAGTTTATTTCTATTTCTGTTTTTAATTTAGATGTTGAACTTTTTGAA GTTTGTGGGTTTATAAAAGTCGTTCATAATCAATTCTTATATTTCTTATA GCTTTTTATCTTTATAAATGATTTACTTACAGAAACTATAGATTATAACT GGACTAATGGTCACAACATCAATCCTTTAATCTTGTTCAGGGTAAAAATA TTTTGGTTTCATGATGGATTTTTCTTTAGTTTTTGAGCCGTTTTGCCCAA TTCCGAAATTTTAGAGTGAAGCTTTCTTATTACGGAGATTTTTGTGTGAA AAGAGATCTATTTTCGATGAATTATCAGGATTCCAAACTACTGAAAAGAT TTAGGACGAAAAATAATCGAAATTAAAGCGGCTGAATTTTTCTGGTACAT CCCTTCCTGTACACAAAATATAGGTATTTTAACATCAAAATTTAAGATCC ATTTTTTAGAATATCGTATTAACTTGCTTTTTTTTGTACATTTTACTTTT ATTTTTCTCGATATTTTCTCGAAATTTATCTATAATTTTAAAGAACGTTC AACGTTCACACAATTTCATAATTTTTTTGTCATTATTAGAAAACTCTTGC TTATACAATATTTTCTTTATGAAATCTGATCACGTTTTAATTATTATATC TTCAAAATACTTTGATAAAAAAAAGAAACTTCTCTTAATCAATCATGTAG AATTCATGATGTTGATGGAGATTTTTTTCTATAATTTAAACTTATTTTTA AAGGTTTTCAAAATGTCTAAACTAACTAAACAGGGAGATTCCTCTCAATG AATAGCTAAAGAAAATGGGGTCACTTTTGACATTCGCACCCCGGGTAGTT ATGCAATTCTATCTGATTAAATTCAACTTACTATTACTCTGTCTTTCATT GTTTGCAATTACACGAAATTTCTTCTACCATAGTTAAGATTGTGGGTGAA GAATAATATTAACAATGAACGACGTAAGAAAATCAATGTTTCTGCCACCA ACAGCAACTACAGAATACAAAAATAAAGAATTGAGCATTTCCTTGGATAT AATGATCTTCAAGCTATCAATTCCTTTCAAAGGGGATTTGACCACACTAG CAAACACTTTTACATTCTCGAAGATATGGATGGTGGAGATCGTCTTCGTG TATTTATGGTGTATTTCAATGAACAACAAAATGCTCTCGAGAAGAGAAAT CTAACCATTGATTTCCAAGATATGGATGGTTCGGAATCGGTCTGGCAGGA ACTTGATGCGTATACTGGGAATGTTGTTGTCATTGTGAAGCATGATATCC TCGATAGTGATAATGCAGAGAACTTTATAATAAATGTTTATCATTATTAT CTCCCTGATGTTTTAGTTGATCATCCGTATAAGGTATTGGATTTAACTAT CGAGCCAAGTGAAGCAGATATTGTTTTAAGATTCGATGATAAAGACTACG AAAGATGCCAAATTTGGTATGGATTAAGAGAAAATGACGTAACTGCACTT TTGGTGTTAACCTTTTTCAAAAAATATAACGAGGAAGGAGAAGCAACTCG TCTCCGTGAATGTTGTTTGGATGTTATAAAGACGCAGCAAACTGAAATCT GTCATTCAAAGAGAGTTGTCGTCGATCTCAGTCAATCTTCAGTTTTTGAC GATTTTTTCTTTTTTCTCAATGCAACAAAAGAGAGAATCTATTTTTATTT CAAAAGAGACAGTGTCTTAAGAATTGACGAATATGACTACACTGGCAATT TTTGTTATGTTTATTCGATTGCAATAGATGATGGATACCATGATTATCAT TTTGACGACCGTTATATTGTTTTATCACACAAAAGAATTACTCACAAGGA TAATGCTATACGAGTTTGGGAATTGAATCAAGATAGGACATGTATTGTTC AAGAGTTTAATGATGAAATAATTGATTACGAAACATCAGATGTAAAGTCA TTTTCGTTTCAATATTCGATCAAAAGGTTTGTTGATTTCCTTTTGGTTGC CAATGCTTCTGACTTTAATAAAGGCAGACAACTTGTCTCTTGGATTCAAA TTTGCAATGGAGAGAAATTAAGAGGGTATGGGATTTTTAGAGGATTGCCT TTACCGAATTTTTTTTTAAATTGGAATCTGCACGAAGTTGGGATCACTTA TTTTGACGAGATGACGATGGAGAGGCAGAAAATGTTTTTCAAAATCGCTC ATGTAAATATGAATGAATATTCAATTCAAAAAATCACTCTGAAACATTTG GCACGAGTGGTAGTACTTCAATTATTTAGCAGTAACGAATTACTAAAGCT CAATCTACCATCAACTCTTTTTGGATATTTAGGAATTGAAAAGTGAAAAT TTGATCTCTTTTATTATTTCATCTGTTCTTTTATTTGAGTCGTGTTTTCT TTTTAAGCTGGCTTAGAATTTTTGAAAATGTTTTTATACAAGTTTTTATG TAATTGTCTCTCCAGAGTGATCTTTGTTAAAAATTACCATTGATCATATC TGATAAATAATATGTTTATCCTAGACTGCCACTTTTTTTTTCCATTTTTC CATTTTTATCTTGTTTTCTAAGATAGACCATTTGATATTTTGATCACTTT AAATAAAGAAACTTTCGAAAATACCTTAAGTGGATTAATTTTGAGGTGGA TATATAAATTGGCGATTGGGAAAAATTAAATCTTTGGCGGGGATTTAACT TGGCGAATAATCAATTTTGTAAATTTTAGCGGGGATTTAATTTGGCGAAT GGGAAGGTTTTAGTCTCTGGTAAACTAAGAAATGCATGGTATTTTACTAA AAATGCATTATTCTCCATAGAACTTCTATCTTGAAAAATTTCGTTAAATT TTGCAGGGATTTAATTTGGCGAATGATCGTTTTTGAAATTTCGGCAGGGA TTTAATTTGGCGTTTTTTAACAAAATTCGTTAAATTCGCCAAATTTAATC CCCGCCAAAATCTATCCACTTAAGGTATTGTCCAAAAAATCAAAGTTTGG ATTTTTACTTGACGTCTAGCCCAGTTTTTGATGAAATTCTTTGAGGGAGT GGCTTAAAGATTACTCAATTCACATTGAGAAAGCTAAGAAGTCGCCCACA ATGGTTTCTGATCTGAGACGAATACCTTAAGGGAAGAAATTTTAGCGGAA ATTTAACTATGCGGGTGGTCGAAAAAGTTTTTTTTACAGATGGGAATTTG ATTTTTTAGATGGCTTGAAAAATTAACCTTTGACGGGAATTTAATTTGGC GGGAACTTTAAATTTGGTTGATCCAGGCTATAATGTAATTTGCATGCTCC TTTTTTTAACATTTTGTCTGTTTGTTGTGTTGTGTATAGTTTGAATTTTT ATATCGAAAAGTTTTCATGGATTGAAATACCAGTTGCTCTTCTTAGTTTC TAACCCTTTGGCCGGTTACTCCTGTCTCTTGAATAGACGCCCCCCCCCGC TAATTGTTAAGAGGAAAAAATCTATCCCCCGCTCTTATTAAGACCCCCTC CCGCTAATACACCCTTTAAAAGTTTCGCCATCTCCACCGTAAAGGCGATA GGTAAAATTGCTCACTTTAGTACTGTGGAAGGTTAGAGAAATGTAAAAAT TGCCATTTTTCTTCTTTCCTTTAAAGAGAATTTTTTGGATGTTTGAACAT GATATTAATGACAATTTTATGTATCTCTCCTGAAAATTTCACAAATTTCA AAAATTACCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNCCCCCCACCCGTCTATTCGGGAGACAAGAGTACG TTAATTTCATTGATTGTCGAGCAAATCATTTATTTGCGCCAAATTACATG AAATTATGCGAGACTCGTAATCTAGCAAGGCTTGCTTCTTAAAGCTTATA CTTTCAAACTTTATTTTTCATTTTTCAGATTAAGGATAACAAATTGAAAA ATAAAAAAAATGACCAATATTGCAAAATCAATGTTTGTACCTCCAAATAT GCTTGGCAAAGATGAATTATCAATCTCACTTGGCGTAGATTTCTACAGAG ATATTTACGACCAAGGCTTTGATGGTTCTGGTAAATATTACATTATTGCA ATAGATGAGTATGGAGAATTTGATATGGCTATTTTTGTTATCGATTTTGA TGCAGTAACTGAATCAATTGGAAAGAAGATATTGAAGATCTCAATACCTA TCGAATGTGAATGCGACAGACAGTCTTTCTTGTTTCCATACCATGGCAAA GTTGTCCATAGTGTTCAATATAAAGCATCAGAAGATGAAAATATTGCTGT GGACCTTTATTATCTCGATATCTTTGACCTTTTGAAAAAATCGAATGACA CAATTGTGATTGATAAAACACCTGATATTACTTTGAATTATGACAAGGAA CGATTTAACAAGATTTATTTTGAACGTTGTGGTGTTGATAAAAAATCATC AACTCTGCTTCTTCAAGGGTATTGTAGATATAGAGAAGATAGATGGTATT ATCGATATCGACCTGAGATTTGCATCGATGTTTTGCACGTTAGTAAGATG CATATGGTTCATTTGAAAAGGGTGGAATGCGATTTGGAGATTTTTTCTTC CGGTATTTACCATCCAATGAAGATCTTATATTCCAAACAAAGGCTGTATT TTTCTGCAAAATCTGTTAAAACGTACGAAATCTTTGAAGTTGATCTTAAT GGGAAAATTGTATTTTCATACATACTGTCATGGGATTCTGATTTGTTCAA TTATCAGTCTTTATTGCAATCTGGAGAAGGTGATACAGTGATTGTCATTT TCTACGGTATATCAGGAATCTTTTGCATGCAAAGACTTCTAGAGGGTCAT ATTGGATCCAGTCAAGAATTCAAACTTCCTGTAAACCTCGAAATCACTAA AGTCGATTTTCCTGGTTGTCCAATATTAAAATTTGGACATCTTTTGATTC CCTTGCTTTACGAGCCGGACAAGTCATCGACGAAATTTTTTCTGTTCGAC TTAAATAGCAAACAGATTTCAAGTGAGATTAATGTAAATCCAAATGATGA AATGCAGACATTTTCATTAAATTGGAATTTAAAGGAATTGGTTTATACTG GGTTCTATGTAAGCAATCACGAGGAGGGTGGCCATGATGAGATGTTGTTC AAAGCTCATAAGATTGTTTTCCCAAATATTGGCTTAACTTTGAAATGTTT AGCGCGTCTTGCTGTTTTGACCTCGTTCAGTGAGGAAGAAATAATCAAGC AAAATCTTCCAGAATCTTTATTCCGGTTTCTTGGAATTGAAAAATAAATG TATAATAAAATAAAGTTTTACGGCGAAGTATTTTTAAGCAACATTTCGTT GGTATAGAAAAATAAATAAAATGTATGAAAATGTTTCTACCCTTAAATTT CCCTGTTTTAAATTGTTCGAATTTTGTGCTTAATGCGTAAATGAGTTCAA GTATCTAAGGATTGCAAAATGTTATTGAACTAAAATTTGGACCAGTGTTA AATCTTAGTCAAGAGGTTTTTTTTTCATAAAAATATTCAATATTTTTGAA GCCTTCGGATATTTTTAAATTTTTGAGTTTTGAACCTAATGTTCTTAACA TGTCCTCATTTTTACCTCGAAGCGTAATGTTATATAACGGTTTGTTTTAA TATGTATGCTTTCATTTAAGTTCAAAAGTCAGAAAACAAAGACCGATAAA AAAATTTTTAAAAAATATGGATTTGCCAAATGAGCTATGGAAATTGGTGA TTTCTTACTTAGATCACAAAAGTGCTCAGAATATTGCTCTTACTTCAAAG AAGATGCAGCAGTTGTCAATGATGAGGCTTTGGTCAAAACCAAGATATAC CAAGAATACAAAGGAAGAATTCAATTTTATTAGAAAGTTGTTTACATTGA AAGCGAAGGCTTGAATTTGGAAAGTTGCTCAATTCTATTAGAAATGGTCA AAGTTATGATGAAGATGAGACATCTTAAAGAA

Coding sequence (CDS) from alignment at scaffold_486:20766..32397-

>TCONS_00068617 ID=TCONS_00068617|Name=TCONS_00068617|organism=Clytia hemisphaerica|type=CDS|length=1560bp|location=Sequence derived from alignment at scaffold_486:20766..32397- (Clytia hemisphaerica)
GCTTGAATTTGGAAAGTTGCTCAATTCTATTAGAAATGGTCAAAGTTATG
ATGAAGATGAGACATCTTAAAGAAATGGATTTGCCAAATGAGCTCTGGAA
ATTAGTGATTTCTTACTTAGATCTCAAAAGTGCTCAGAATATTGCTCTTA
CTTCAAAGAAGATGCACCAGTTGTCAATGATGAGGCTTTGGTCAAAACCA
AGATATACCAAGAATACAAAGGACATTGCATTTCTACACAAGATTTCAAA
TTTTTCTATTCGTGAGTTGCACACCTCTGATTTCAGTTGTAAATGGCTTG
AGATTTTAGGGTTGGTTCCACAACTTAGACTTTTACATGTTGACAATGCA
TTCAATTATCATTTTAAACCAGACAAAGCTTATTTGCGTTTCTTAAAGAT
TTCTGTTATTGTTCATACAAAAGCCTTAGAAATCTGGGAGAACTTTGAAG
AATTGTTGGATATTTTGTGTTCCATCAAAATTCAATCATTGGTTATTGAT
CACGATTCGAGGTATTATCAAAGAGAAAATCTTCAACGTTATCTGACTTT
CGAAGAATTTAAACTGCTTTCTTCAAAAGTTTGTATTTCCGAGGTGCATA
CAGATTGTATCGAATGGGATAGTGGAAATATCCTTGATTTTATTGAGTTG
TTGTCAACCATGAGGGATTGCAGTGTCTATTTATATAACCACAACCATTT
ATCTACGTCTTTATATACTGTTAAACATTTGGAATTGATGGTAGCCCTTG
ATATCAAAATTGTTTACATTGAAAGTGAAGGCTTGAATTTGGAAAGTTGC
TCAATTCTATTAGAAATGGTCAAAGTTATGATGAAGATGAGACATCTTAA
AGAAATGGATTTGCCAAATGAGCTCTGGAAATTAGTGATTTCTTACTTAG
ATCTCAAAAGTGCTCAGAATATTGCTCTTACTTCAAAGAAGATGCACCAG
TTGTCAATGATGAGGCTTTGGTCAAAACCAAGATATACCAAGAATACAAA
GGACATTGCATTTCTACACAAGATTTCAAATTTTTCTATTCGTGAGTTGC
ACACCTCTGATTTCAGTTGTAAATGGCTTGAGATTTTAGGGTTGGTTCCA
CAACTTAGACTTTTACATGTTGACAATGCATTCAATTATCATTTTAAACC
AGACAAAGCTTATTTGCGTTTCTTAAAGATTTCTGTTATTGTTCATACAA
AAGCCTTAGAAATCTGGGAGAACTTTGAAGAATTGTTGGATATTTTGTGT
TCCATCAAAATTCAATCATTGGTTATTGATCACGATTCGAGGTATTATCA
AAGAGAAAATCTTCAACGTTATCTGACTTTCGAAGAATTTAAACTGCTTT
CTTCAAAAGTTTGTATTTCCGAGGTGCATACAGATTGTATCGAATGGGAT
AGTGGAAATATCCTTGATTTTATTGAGTTGTTGTCAACCATGAGGGATTG
CAGTGTCTATTTATATAACCACAACCATTTATCTACGTCTTTATATACTG
TTAAACATTTGGAATTGATGGTAGCCCTTGATATCAAAATTGTTTACATT
GAAAGTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042800XLOC_042800Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068617-proteinTCONS_00068617-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068617-exon-scaffold_486-1575043694:31639..32397TCONS_00068617-exon-scaffold_486-1575043694:31639..32397Clytia hemisphaericaexon
TCONS_00068617-exon-scaffold_486-1575043694:20766..20839TCONS_00068617-exon-scaffold_486-1575043694:20766..20839Clytia hemisphaericaexon
TCONS_00068617-exon-scaffold_486-1510915933:31639..32397TCONS_00068617-exon-scaffold_486-1510915933:31639..32397Clytia hemisphaericaexon
TCONS_00068617-exon-scaffold_486-1510915933:20766..20839TCONS_00068617-exon-scaffold_486-1510915933:20766..20839Clytia hemisphaericaexon
TCONS_00068617-exon-scaffold_486-1491911889:31639..32397TCONS_00068617-exon-scaffold_486-1491911889:31639..32397Clytia hemisphaericaexon
TCONS_00068617-exon-scaffold_486-1491911889:20766..20839TCONS_00068617-exon-scaffold_486-1491911889:20766..20839Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_486supercontigscaffold_486:20766..32397 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.88494 7.58524 3.67952 2.38466 0.196203 0 0.0568553 0.0939804 0 0 0 0 0 0.141492 0 0.223677 0 0.349793 0.0686222 0 0.376026 0.0514515 5.02304 3.10728 0 0.829389 0.0579554 0.238438 1.16612 2.86864
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR032675L_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068617 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top