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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068597 ID=TCONS_00068597|Name=TCONS_00068597|organism=Clytia hemisphaerica|type=transcript|length=1387bp
CTTTATTTTATTatacatttatttttcaattccaAGAAACCGGAATAAAG
ATTCTGgaagattttgcttgattatTTCTTCCTCACTGAACGAGGTCAAA
ACAGCAAGACGCGCTAAACATTTCAAAGTTAAGCCAATATTTGGGAAAAC
AATCTTATGAGCTTTGAACAACATCTCATCATGGCCACCCTCCTCGTGAT
TGCTTACATAGAACCCAGTATAAACCAATTCCTTTAAATTccaatttaat
gaaaatgtctgCATTTCATCATTTGGATTTACATTAATCTCACTTGAAAT
CTGTTTGCTATTTAAGTCGAACAGAAAAAATTTCGTCGATGACTTGTCCG
GCTCGTAAAGCAAGGGAATCAAAAGATGTCCAAATTTTAATATTGGACAA
CCAGGAAAATCGACTTTAGTGATTTCGAGGTTTACAGGAAGTTTGAATTC
TTGACTGGATCCAATATGACCCTCTAGAAGTCTTTGCATGCAAAAGATTC
CTGATATACCGTAGAAAATGACAATCACTGTATCACCTTCTCCAGATTGC
AATAAAGACTGATAATTGAACAAATCAGAATCCCATGACAGTATGTATGA
AAATACAATTTTCCCATTAAGATCAACTTCAAAGATTTCGTACGTTTTAA
CAGATTTTGCAGAAAAATACAGCCTTTGTTTGGAATATAAGATCTTCATT
GGATGGTAAATACCGGAAGAAAAAATCTCCAAATCGCATTCCACCCTTTT
CAAATGAACCATATGCATCTTACTAACGTGCAAAACATCGATGCAAATCT
CAGGTCGATATCGATAATACCATCTATCTTCTCTATATCTACAATACCCT
TGAAGAAGCagagttgatgattttttatcAACACCACAACGTTCAAAATA
AATCTTGTTAAATCGTTCCTTGTCATAATTCAAAGTAATATCAGGTGTTT
TATCAATCACAATTGTGTCATTCGATTTTTTCAAAAGGTCAAAGATATCG
AGATAATAAAGGTCCACAGCAATATTTTCATCTTCTGATGCTTTATATTG
AACACTATGGACAACTTTGCCATGGTATGGAAACAAGAAAGACTGTCTGT
CGCATTCACATTCGATAGGTATTGAGATCTTCAATATCTTCTTTCCAATT
GATTCAGTTACTGCATCAAAATCGATAACAAAAATAGCCATATCAAATTC
TCCATACTCATCTATTGCAATAATGTAATATTTACCAGAACCATCAAAGC
CTTGGTCGTAAATATCTCTGTAGAAATCTACGCCAAGTGAGATTGATAAT
TCATCTTTGCCAAGCATATTTGGAGGTACAAACATTGATTTTGCAATATt
ggtcattttttttatttttcaatttgttatccttaat Run BLAST on NCBI transcript from alignment at scaffold_486:21433..22819+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068597 ID=TCONS_00068597|Name=TCONS_00068597|organism=Clytia hemisphaerica|type=transcript|length=1387bp|location=Sequence derived from alignment at scaffold_486:21433..22819+ (Clytia hemisphaerica)
CTTTATTTTATTatacatttatttttcaattccaAGAAACCGGAATAAAG
ATTCTGgaagattttgcttgattatTTCTTCCTCACTGAACGAGGTCAAA
ACAGCAAGACGCGCTAAACATTTCAAAGTTAAGCCAATATTTGGGAAAAC
AATCTTATGAGCTTTGAACAACATCTCATCATGGCCACCCTCCTCGTGAT
TGCTTACATAGAACCCAGTATAAACCAATTCCTTTAAATTccaatttaat
gaaaatgtctgCATTTCATCATTTGGATTTACATTAATCTCACTTGAAAT
CTGTTTGCTATTTAAGTCGAACAGAAAAAATTTCGTCGATGACTTGTCCG
GCTCGTAAAGCAAGGGAATCAAAAGATGTCCAAATTTTAATATTGGACAA
CCAGGAAAATCGACTTTAGTGATTTCGAGGTTTACAGGAAGTTTGAATTC
TTGACTGGATCCAATATGACCCTCTAGAAGTCTTTGCATGCAAAAGATTC
CTGATATACCGTAGAAAATGACAATCACTGTATCACCTTCTCCAGATTGC
AATAAAGACTGATAATTGAACAAATCAGAATCCCATGACAGTATGTATGA
AAATACAATTTTCCCATTAAGATCAACTTCAAAGATTTCGTACGTTTTAA
CAGATTTTGCAGAAAAATACAGCCTTTGTTTGGAATATAAGATCTTCATT
GGATGGTAAATACCGGAAGAAAAAATCTCCAAATCGCATTCCACCCTTTT
CAAATGAACCATATGCATCTTACTAACGTGCAAAACATCGATGCAAATCT
CAGGTCGATATCGATAATACCATCTATCTTCTCTATATCTACAATACCCT
TGAAGAAGCagagttgatgattttttatcAACACCACAACGTTCAAAATA
AATCTTGTTAAATCGTTCCTTGTCATAATTCAAAGTAATATCAGGTGTTT
TATCAATCACAATTGTGTCATTCGATTTTTTCAAAAGGTCAAAGATATCG
AGATAATAAAGGTCCACAGCAATATTTTCATCTTCTGATGCTTTATATTG
AACACTATGGACAACTTTGCCATGGTATGGAAACAAGAAAGACTGTCTGT
CGCATTCACATTCGATAGGTATTGAGATCTTCAATATCTTCTTTCCAATT
GATTCAGTTACTGCATCAAAATCGATAACAAAAATAGCCATATCAAATTC
TCCATACTCATCTATTGCAATAATGTAATATTTACCAGAACCATCAAAGC
CTTGGTCGTAAATATCTCTGTAGAAATCTACGCCAAGTGAGATTGATAAT
TCATCTTTGCCAAGCATATTTGGAGGTACAAACATTGATTTTGCAATATt
ggtcattttttttatttttcaatttgttatccttaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068597-exon-scaffold_486-1491911889:21433..22819 | TCONS_00068597-exon-scaffold_486-1491911889:21433..22819 | Clytia hemisphaerica | exon |
| TCONS_00068597-exon-scaffold_486-1510915933:21433..22819 | TCONS_00068597-exon-scaffold_486-1510915933:21433..22819 | Clytia hemisphaerica | exon |
| TCONS_00068597-exon-scaffold_486-1575043694:21433..22819 | TCONS_00068597-exon-scaffold_486-1575043694:21433..22819 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_486 | supercontig | scaffold_486:21433..22819 + |
Blast
The following BLAST results are available for this feature:
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