TCONS_00068495 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068495
Unique NameTCONS_00068495
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3350

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068495 ID=TCONS_00068495|Name=TCONS_00068495|organism=Clytia hemisphaerica|type=transcript|length=3350bp
CGCAATTGGAGCTGCTCACAAATCTCTATTTATTCCATTTattctttttc
caaaatggtaGATAAAGCAGCGAGCAAAACACTTTCGCTTTCATTCTAAC
CAGAATTTATatcgattttcatttttcagatttttcatctttcttgaTCT
GTTTTTTTGTACAACTTGTCATGCGAAAACCTCGATACACCATCTTCCTT
GGTTATGGAGAAGAAGCAGAAAGCTTATTGAAATTATTCGAGCAAGTGAA
ATGTCGCACAGGTATTAGCTCAAACATTCCGTTCATAAAActtttgttga
cattttttgagAGATCATTCAATGACAATGATGAGGATGAGATTGAAGCC
TCTGAAGCTGTTCCAGGTGACAATAGTTCAGTGCAAAACAATGATATTGA
TTTGAATGTTTCTAAAGGGATTTATGAGTATCCTAACTCACACCAGCCGT
CAAATATCTTGTCAGTAGAAAAATTAGAGGACAACATGAAAGATGTTGTA
ATGACAAAAGAAGTGacagaaaaaaaataccaaCGAAGAAGCAGTCTAGA
AAATAATGACACAAACAAATCGAATGATTCTTTGGAAACCATAGACATGT
CTACTCTAAGAACGTCGTCAAATCTAGATAAAATAATGGAAGAAAATTAC
TCAAACAATTCAGCTGTGCGCCTTTCCTCTTTTAAAGATTGTTGTCATAA
CAATCATGAAACAGAAAGCACTATCATCAGAGTCAGTAACAGTACTCCAT
GTGGCCCTGTTGATGATACTTTCAATAATATGGACGATAATATGGCATGC
GCCGTTGCAAAAAGTATTTGCTGCACAAGATTTGTTGATGAAATTACAAA
AAGCTCCAATGTAATTCAGGAACTTTCTGACCAAGTTGAGGCTGAAATTG
TCAATGTCGATGAACCAGGACCTTCTTTCCCtccaaaaatgatgaaaatt
gatgaaattaAGCTCTCAGATGGAATGGAAGATGATAAAGTTGATGAAGA
ATTGCCTAGGGAGCAAGAAAAGGAAGAGATCCCGCAAACTCCTTTGGATG
TCATCAACAAATTCATGGAACACGTACAGAAAGAACTTGATTACTACCAT
GGTTTCATTTCGTCGGGTAGCAAGTTACGAGAGTTCTTAGAAGAATATCG
AAAAGTTACAAACATGGTTTTTACCGTTCGAAGCTCGCGTTCTTATATCA
AGAAAAGAGCAGCACTGAACTCAAATATTCTAGATGCAGCACATCAGACA
CTGGGTGAGAGTGACATTACAGAGGAGCGGGCGTTAGATGAAAACAATAT
TACCGAAGAGATGGACGAGGACACTTCATTCGATAAGACGGCTTCAGAAG
ATCGAACGAATAAAAAAGAACGTAAAAATTCATCTATCTCAAAACCTGAG
GATTATGCTGTTATGGACAGTATCATGAcagGTCCACTTCGCTGGGAATA
CGACTTCGGTATGCCGCCTATCCCGTTCACTGGAACTCCCTTTTGTATCA
TCGGTAATACACATTACAAATGTTTTTATGCGTGTCCAGATTCAAGAACT
TTACGGAAACGAAAATTAACAGAAGACGATCAAACGTTGGAAAACATGGT
GAAAAAGCGAAGTCGGCGCTCCTTGAAGAGGGATTGTAAAGCCATGATGT
GCATCAAGAGTATTGTCTGTTTTCCTGAACACACTGTCAAACACTCAATT
CAAAAAGCCTCCTCCAAGAAGGCCTgtcgaaaattgaaagcaaGCGCGCT
CAACCAGATAAGAGATGCATTTTTAAACGGAGAAGCGATCGGCCATCCAG
CGTTTTGGTTGCATGTGCCATTACCTGAAGCTCACACTACGCATGATCTA
TTTCCTGAAAACGTGGAGGAGAGGTTGATAGAACAACCAACAGACAGTAT
GGATGCCATCACTCACATCTTGAGCGTGGCCGCACGTTACGGTAGTAAAG
TACAAATGTCGAGTAAAGGTGCGGATAACGTATTGGAATTACACTTGAAT
CAGCCGTCGGCTTCCGGGGAGGAGACTGGCTGAGAGAAACATTGTTGGGA
TCAGTGCGTCTCGCACAAACAAAATGACGGAAGTAACATGACGGAAACAA
GTTGAATGTTTTAAGTTTCGAAGTATGGTATAAGTTACTGTAATTTTCTA
GTAGGAGCAACATCATTTCCCTCTCAAGGcatcttttatcattttctcaG
TTGGTCGACCGAAATTGGGCCAAACTTGGTAAGCAATTTTCGACGCCCCC
TattaaaatctttgtaaaaatgACACGATCGGAGTGAGCACGCgcacaaa
atttttcttttgtgcTGAATAAAACTGCTCATTTTAAGGCGCAAAAAAGC
AAGAGGGTCGCCGAAATTATTAAACAGAGGCCTTTTTGCACCCATTCTCT
TTTGGCACCCATTCTCTTTTGGCACCCCCCCCCTCCTTCCAAAATAAATC
GGCTTCTTGCGGGGGAGGCACGCTACTGGGTAAGTGGTTGCAACAGATCG
ATGATACGAGGGTGTAAACAGAAGTGTGTATTCATTCTGAACAGTAAATC
TTCAGGGTATGATAATTAAATGATTGTATTACTGTGtacattgggctgtt
ccattaagaAACCATACAAGGGGTGgatgaaccttttcaagtcaaaaaaa
aattattgaaaatgtgtggataccccctggaaaatggcaaaatttgcaaa
aacacccttggaaaaattctcttacaccttaaagtgagggtggaggaggt
aaaatcagtcttttacccctggaaatttttacccctttggaaaaatgaaa
aaacaccccctctcggattaccctctggaaatgttcgtccaccccccctg
tatggatataaaatggaatgacccaTTTGAACATATCAGAGATGAAATGA
ACCCGTTGACTCggctttttcatcttcattcaaCAGATGAAAAGATGCCT
AAATATTTATAGatctgaaaaaatttgaatttttattctgtaaatatatt
tatttcaaatatcaatattttattattctAAAGATAAATGGTCCACGGAT
CCATGATAAGAATAATTTTCGTGTAGCCCTGGTATTTTGGTGAgggtttt
tttcaaaaggtcAAATTTGATAGTCAAGTTTTCGTCGCTTATATTTTTGC
AATGTGTATTTCTCTGTTAATACAAGAATCATACGGGACTGGCTTCTCAA
AAGTAGAAAggaattttggaaatcttttacaagtttgttttgtatTCTTC
TTCAAATTTCATTAAGTTTGTTTCTATTGGGTTTGAAAATAAGGAAGGCG
tcgtgaaagaaaaaaatcactgtaTCCCTAATGAGTGACTGCGAAGAATT
Run BLAST on NCBI

protein sequence of TCONS_00068495-protein

>TCONS_00068495-protein ID=TCONS_00068495-protein|Name=TCONS_00068495-protein|organism=Clytia hemisphaerica|type=polypeptide|length=620bp
MRKPRYTIFLGYGEEAESLLKLFEQVKCRTGISSNIPFIKLLLTFFERSF
NDNDEDEIEASEAVPGDNSSVQNNDIDLNVSKGIYEYPNSHQPSNILSVE
KLEDNMKDVVMTKEVTEKKYQRRSSLENNDTNKSNDSLETIDMSTLRTSS
NLDKIMEENYSNNSAVRLSSFKDCCHNNHETESTIIRVSNSTPCGPVDDT
FNNMDDNMACAVAKSICCTRFVDEITKSSNVIQELSDQVEAEIVNVDEPG
PSFPPKMMKIDEIKLSDGMEDDKVDEELPREQEKEEIPQTPLDVINKFME
HVQKELDYYHGFISSGSKLREFLEEYRKVTNMVFTVRSSRSYIKKRAALN
SNILDAAHQTLGESDITEERALDENNITEEMDEDTSFDKTASEDRTNKKE
RKNSSISKPEDYAVMDSIMTGPLRWEYDFGMPPIPFTGTPFCIIGNTHYK
CFYACPDSRTLRKRKLTEDDQTLENMVKKRSRRSLKRDCKAMMCIKSIVC
FPEHTVKHSIQKASSKKACRKLKASALNQIRDAFLNGEAIGHPAFWLHVP
LPEAHTTHDLFPENVEERLIEQPTDSMDAITHILSVAARYGSKVQMSSKG
ADNVLELHLNQPSASGEETG
Run BLAST on NCBI

transcript from alignment at scaffold_485:270472..275418+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068495 ID=TCONS_00068495|Name=TCONS_00068495|organism=Clytia hemisphaerica|type=transcript|length=4947bp|location=Sequence derived from alignment at scaffold_485:270472..275418+ (Clytia hemisphaerica)
CGCAATTGGAGCTGCTCACAAATCTCTATTTATTCCATTTattctttttc
caaaatggtaGATAAAGCAGCGAGCAAAACACTTTCGCTTTCATTCTAAC
CAGAATTTATatcgattttcatttttcagatttttcatctttcttgaTCT
GTTTTTTTGTACAACTTGTCATGCGAAAACCTCGATACACCATCTTCCTT
GGTTATGGAGAAGAAGCAGAAAGCTTATTGAAATTATTCGAGCAAGTGAA
ATGTCGCACAGGTATTAGCTCAAACATTCCGTTCATAAAActtttgttga
cattttttgagAGATCATTCAATGACAATGATGAGGATGAGATTGAAGCC
TCTGAAGCTGTTCCAGGTGACAATAGTTCAGTGCAAAACAATGATATTGA
TTTGAATGTTTCTAAAGGGATTTATGAGTATCCTAACTCACACCAGCCGT
CAAATATCTTGTCAGTAGAAAAATTAGAGGACAACATGAAAGATGTTGTA
ATGACAAAAGAAGTGacagaaaaaaaataccaaCGAAGAAGCAGTCTAGA
AAATAATGACACAAACAAATCGAATGATTCTTTGGAAACCATAGACATGT
CTACTCTAAGAACGTCGTCAAATCTAGATAAAATAATGGAAGAAAATTAC
TCAAACAATTCAGCTGTGCGCCTTTCCTCTTTTAAAGATTGTTGTCATAA
CAATCATGAAACAGAAAGCACTATCATCAGAGTCAGTAACAGTACTCCAT
GTGGCCCTGTTGATGATACTTTCAATAATATGGACGATAATATGGCATGC
GCCGTTGCAAAAAGTATTTGCTGCACAAGATTTGTTGATGAAATTACAAA
AAGCTCCAATGTAATTCAGGAACTTTCTGACCAAGTTGAGGCTGAAATTG
TCAATGTCGATGAACCAGGACCTTCTTTCCCtccaaaaatgatgaaaatt
gatgaaattaAGCTCTCAGATGGAATGGAAGATGATAAAGTTGATGAAGA
ATTGCCTAGGTAAATATTGAATTTGTTATGAGCTGTCTAACTTGCGAAAA
TTTCTCAAACTTTCTTAATTTCAAAATGCAAGAATAAAAGTaatcttttt
caaagattttgcatacttttgtCTGGTGAAAAGAATAACCAGAAGCgtca
tgtttttatttaaaaaatataataaaaacatggcACTTCTGGTTATTCTT
TTCACCATTAAATTATTGGCCCAAAGAagcaaaactccaagcactttagT
CAGTTAAACTTTCCAAATATAGATATAAATTCCTTTAGGGTACCTTTTCA
AGCCAtttcttaaaatatattttgtatacaatgagctatatactttcacg
cTTTAAAATCGTCTAATTTTCCTCTTGATCCTTTACTGAGATTAGCTAtc
tatgatcttttttttttcttgccaTTATTTTGTTGTGATTTGTTTTGTGT
AGAGTTATATCAGTATGTATGAGAAGAGAGAACAGATGGATATCAAGAAG
CCGCTCAGCATATATGGCAGTACGTAGTTTTTAAATAAGGAAGAAATTCA
TATGATGCTACCAATGCCATCCAATATGGATAGCAATTCTATGAATTTCT
TCATATATATATTGCTGATATAATGGTGCTTTGGGAGACttgatttttta
tcttttctacaCAGGGAGCAAGAAAAGGAAGAGATCCCGCAAACTCCTTT
GGATGTCATCAACAAATTCATGGAACACGTACAGAAAGAACTTGATTACT
ACCATGGTTTCATTTCGTCGGGTAGCAAGTTACGAGAGTTCTTAGAAGAA
TATCGAAAAGTTACAAACATGGTTTTTACCGTTCGAAGCTCGCGTTCTTA
TATCAAGAAAAGAGCAGCACTGAACTCAAATATTCTAGATGCAGCACATC
AGACACTGGGTGAGAGTGACATTACAGAGGAGCGGGCGTTAGATGAAAAC
AATATTACCGAAGAGATGGACGAGGACACTTCATTCGATAAGACGGCTTC
AGAAGATCGAACGAATAAAAAAGAACGTAAAAATTCATCTATCTCAAAAC
CTGAGGATTATGCTGTTATGGACAGTATCATGAcaggtttgttttttttc
atcaacAGAATTCTGTTGTTCCCTGTTCATCATAAACCATTCCCTTTTGT
AGCGCTTTATTGAGACAATGATGATATActggacaaaggttaattttcGT
GATTGAAAAAGATTTGTGTTGACAGCTAATTCTTTTCCAATTTAAAGGTC
CACTTCGCTGGGAATACGACTTCGGTATGCCGCCTATCCCGTTCACTGGA
ACTCCCTTTTGTATCATCGGTAATACACATTACAAATGTTTTTATGCGTG
TCCAGATTCAAGAACTTTACGGAAACGAAAATTAACAGAAGACGATCAAA
CGGTAAggatttttgacaaaatgagAGCATTAGAACGAAGCTTTTTTTAT
TCCTCGTTTACTGGTAGGTATAATGGTCTTCTAAAACTCTTAAGTGCCga
gggggttcgaataaacgggggggggttaaaaattttttcaaatcaaataa
acgggggcctaattaccggggggggggttggaaaatggattttttaaaac
tctaaaaagggtcaaaatagactaaatttaggctttttagagtaaaacaa
ggaactttccttttggtagctgggaattttttcaaaaatttataaacGGG
GGGtcggaaaaaatcgaaaaattaacaagcggggggggggcgtttatttg
gcacctaagagtaagctTTTAAATACATCAATGTGGTTGCTCGAAATTAC
TAGCCTTGGGATCACtattaaaaattagaaaaacacGAAGATCCTTTTAG
TATCATACCGTACTTACCATTgaatttggatgggaaataagtggcttcat
ttcccatccaggagtctatAGTAGTATCGAGTATAGCCCTTCAAGCTTGG
ACGTCAATGCTATTTACGCATAACAATCTAAAATTTtcctcaacaatcaa
atgaaaacttttccgcgaaaaaaattaaaatatgttTTACTTTCAATGCG
ACGCTAGTGTGAAAAAACACACGGATCACGCATTTTAGATGGGAAATAAT
tgacttcatttcccatccaagagttcCATCTCTAGCCTAACCTCAAAATA
TCATGTACTTTTACTATTTCGTTTTCATTATAGTTGGAAAACATGGTGAA
AAAGCGAAGTCGGCGCTCCTTGAAGAGGGATTGTAAAGCCATGATGTGCA
TCAAGAGTATTGTCTGTTTTCCTGAACACACTGTCAAACACTCAATTCAA
AAAGCCTCCTCCAAGAAGGCCTgtcgaaaattgaaagcaaGCGCGCTCAA
CCAGATAAGAGATGCATTTTTAAACGGAGAAGCGATCGGCCATCCAGCGT
TTTGGTTGCATGTGCCATTACCTGAAGCTCACACTACGCATGATCTATTT
CCTGAAAACGTGGAGGAGAGGTTGATAGAACAACCAACAGACAGTATGGA
TGCCATCACTCACATCTTGAGCGTGGCCGCACGTTACGGTAGTAAAGTAC
AAATGTCGAGTAAAGGTGCGGATAACGTATTGGAATTACACTTGAATCAG
CCGTCGGCTTCCGGGGAGGAGACTGGCTGAGAGAAACATTGTTGGGATCA
GTGCGTCTCGCACAAACAAAATGACGGAAGTAACATGACGGAAACAAGTT
GAATGTTTTAAGTTTCGAAGTATGGTATAAGTTACTGTAATTTTCTAGTA
GGAGCAACATCATTTCCCTCTCAAGGcatcttttatcattttctcaGTTG
GTCGACCGAAATTGGGCCAAACTTGGTAAGCAATTTTCGACGCCCCCTat
taaaatctttgtaaaaatgACACGATCGGAGTGAGCACGCgcacaaaatt
tttcttttgtgcTGAATAAAACTGCTCATTTTAAGGCGCAAAAAAGCAAG
AGGGTCGCCGAAATTATTAAACAGAGGCCTTTTTGCACCCATTCTCTTTT
GGCACCCATTCTCTTTTGGCACCCCCCCCCTCCTTCCAAAATAAATCGGC
TTCTTGCGGGGGAGGCACGCTACTGGGTAAGTGGTTGCAACAGATCGATG
ATACGAGGGTGTAAACAGAAGTGTGTATTCATTCTGAACAGTAAATCTTC
AGGGTATGATAATTAAATGATTGTATTACTGTGtacattgggctgttcca
ttaagaAACCATACAAGGGGTGgatgaaccttttcaagtcaaaaaaaaat
tattgaaaatgtgtggataccccctggaaaatggcaaaatttgcaaaaac
acccttggaaaaattctcttacaccttaaagtgagggtggaggaggtaaa
atcagtcttttacccctggaaatttttacccctttggaaaaatgaaaaaa
caccccctctcggattaccctctggaaatgttcgtccaccccccctgtat
ggatataaaatggaatgacccaTTTGAACATATCAGAGATGAAATGAACC
CGTTGACTCggctttttcatcttcattcaaCAGATGAAAAGATGCCTAAA
TATTTATAGatctgaaaaaatttgaatttttattctgtaaatatatttat
ttcaaatatcaatattttattattctAAAGATAAATGGTCCACGGATCCA
TGATAAGAATAATTTTCGTGTAGCCCTGGTATTTTGGTGAgggttttttt
caaaaggtcAAATTTGATAGTCAAGTTTTCGTCGCTTATATTTTTGCAAT
GTGTATTTCTCTGTTAATACAAGAATCATACGGGACTGGCTTCTCAAAAG
TAGAAAggaattttggaaatcttttacaagtttgttttgtatTCTTCTTC
AAATTTCATTAAGTTTGTTTCTATTGGGTTTGAAAATAAGGAAGGCGtcg
tgaaagaaaaaaatcactgtaTCCCTAATGAGTGACTGCGAAGAATT

Coding sequence (CDS) from alignment at scaffold_485:270472..275418+

>TCONS_00068495 ID=TCONS_00068495|Name=TCONS_00068495|organism=Clytia hemisphaerica|type=CDS|length=7452bp|location=Sequence derived from alignment at scaffold_485:270472..275418+ (Clytia hemisphaerica)
ATGCGAAAACCTCGATACACCATCTTCCTTGGTTATGGAGAAGAAGCAGA
AAGCTTATTGAAATTATTCGAGCAAGTGAAATGTCGCACAGGTATTAGCT
CAAACATTCCGTTCATAAAActtttgttgacattttttgagAGATCATTC
AATGACAATGATGAGGATGAGATTGAAGCCTCTGAAGCTGTTCCAGGTGA
CAATAGTTCAGTGCAAAACAATGATATTGATTTGAATGTTTCTAAAGGGA
TTTATGAGTATCCTAACTCACACCAGCCGTCAAATATCTTGTCAGTAGAA
AAATTAGAGGACAACATGAAAGATGTTGTAATGACAAAAGAAGTGacaga
aaaaaaataccaaCGAAGAAGCAGTCTAGAAAATAATGACACAAACAAAT
CGAATGATTCTTTGGAAACCATAGACATGTCTACTCTAAGAACGTCGTCA
AATCTAGATAAAATAATGGAAGAAAATTACTCAAACAATTCAGCTGTGCG
CCTTTCCTCTTTTAAAGATTGTTGTCATAACAATCATGAAACAGAAAGCA
CTATCATCAGAGTCAGTAACAGTACTCCATGTGGCCCTGTTGATGATACT
TTCAATAATATGGACGATAATATGGCATGCGCCGTTGCAAAAAGTATTTG
CTGCACAAGATTTGTTGATGAAATTACAAAAAGCTCCAATGTAATTCAGG
AACTTTCTGACCAAGTTGAGGCTGAAATTGTCAATGTCGATGAACCAGGA
CCTTCTTTCCCtccaaaaatgatgaaaattgatgaaattaAGCTCTCAGA
TGGAATGGAAGATGATAAAGTTGATGAAGAATTGCCTAGGGAGCAAGAAA
AGGAAGAGATCCCGCAAACTCCTTTGGATGTCATCAACAAATTCATGGAA
CACGTACAGAAAGAACTTGATTACTACCATGGTTTCATTTCGTCGGGTAG
CAAGTTACGAGAGTTCTTAGAAGAATATCGAAAAGTTACAAACATGGTTT
TTACCGTTCGAAGCTCGCGTTCTTATATCAAGAAAAGAGCAGCACTGAAC
TCAAATATTCTAGATGCAGCACATCAGACACTGGGTGAGAGTGACATTAC
AGAGGAGCGGGCGTTAGATGAAAACAATATTACCGAAGAGATGGACGAGG
ACACTTCATTCGATAAGACGGCTTCAGAAGATCGAACGAATAAAAAAGAA
CGTAAAAATTCATCTATCTCAAAACCTGAGGATTATGCTGTTATGGACAG
TATCATGAcagGTCCACTTCGCTGGGAATACGACTTCGGTATGCCGCCTA
TCCCGTTCACTGGAACTCCCTTTTGTATCATCGGTAATACACATTACAAA
TGTTTTTATGCGTGTCCAGATTCAAGAACTTTACGGAAACGAAAATTAAC
AGAAGACGATCAAACGTTGGAAAACATGGTGAAAAAGCGAAGTCGGCGCT
CCTTGAAGAGGGATTGTAAAGCCATGATGTGCATCAAGAGTATTGTCTGT
TTTCCTGAACACACTGTCAAACACTCAATTCAAAAAGCCTCCTCCAAGAA
GGCCTgtcgaaaattgaaagcaaGCGCGCTCAACCAGATAAGAGATGCAT
TTTTAAACGGAGAAGCGATCGGCCATCCAGCGTTTTGGTTGCATGTGCCA
TTACCTGAAGCTCACACTACGCATGATCTATTTCCTGAAAACGTGGAGGA
GAGGTTGATAGAACAACCAACAGACAGTATGGATGCCATCACTCACATCT
TGAGCGTGGCCGCACGTTACGGTAGTAAAGTACAAATGTCGAGTAAAGGT
GCGGATAACGTATTGGAATTACACTTGAATCAGCCGTCGGCTTCCGGGGA
GGAGACTGGCTGAATGCGAAAACCTCGATACACCATCTTCCTTGGTTATG
GAGAAGAAGCAGAAAGCTTATTGAAATTATTCGAGCAAGTGAAATGTCGC
ACAGGTATTAGCTCAAACATTCCGTTCATAAAActtttgttgacattttt
tgagAGATCATTCAATGACAATGATGAGGATGAGATTGAAGCCTCTGAAG
CTGTTCCAGGTGACAATAGTTCAGTGCAAAACAATGATATTGATTTGAAT
GTTTCTAAAGGGATTTATGAGTATCCTAACTCACACCAGCCGTCAAATAT
CTTGTCAGTAGAAAAATTAGAGGACAACATGAAAGATGTTGTAATGACAA
AAGAAGTGacagaaaaaaaataccaaCGAAGAAGCAGTCTAGAAAATAAT
GACACAAACAAATCGAATGATTCTTTGGAAACCATAGACATGTCTACTCT
AAGAACGTCGTCAAATCTAGATAAAATAATGGAAGAAAATTACTCAAACA
ATTCAGCTGTGCGCCTTTCCTCTTTTAAAGATTGTTGTCATAACAATCAT
GAAACAGAAAGCACTATCATCAGAGTCAGTAACAGTACTCCATGTGGCCC
TGTTGATGATACTTTCAATAATATGGACGATAATATGGCATGCGCCGTTG
CAAAAAGTATTTGCTGCACAAGATTTGTTGATGAAATTACAAAAAGCTCC
AATGTAATTCAGGAACTTTCTGACCAAGTTGAGGCTGAAATTGTCAATGT
CGATGAACCAGGACCTTCTTTCCCtccaaaaatgatgaaaattgatgaaa
ttaAGCTCTCAGATGGAATGGAAGATGATAAAGTTGATGAAGAATTGCCT
AGGGAGCAAGAAAAGGAAGAGATCCCGCAAACTCCTTTGGATGTCATCAA
CAAATTCATGGAACACGTACAGAAAGAACTTGATTACTACCATGGTTTCA
TTTCGTCGGGTAGCAAGTTACGAGAGTTCTTAGAAGAATATCGAAAAGTT
ACAAACATGGTTTTTACCGTTCGAAGCTCGCGTTCTTATATCAAGAAAAG
AGCAGCACTGAACTCAAATATTCTAGATGCAGCACATCAGACACTGGGTG
AGAGTGACATTACAGAGGAGCGGGCGTTAGATGAAAACAATATTACCGAA
GAGATGGACGAGGACACTTCATTCGATAAGACGGCTTCAGAAGATCGAAC
GAATAAAAAAGAACGTAAAAATTCATCTATCTCAAAACCTGAGGATTATG
CTGTTATGGACAGTATCATGAcagGTCCACTTCGCTGGGAATACGACTTC
GGTATGCCGCCTATCCCGTTCACTGGAACTCCCTTTTGTATCATCGGTAA
TACACATTACAAATGTTTTTATGCGTGTCCAGATTCAAGAACTTTACGGA
AACGAAAATTAACAGAAGACGATCAAACGTTGGAAAACATGGTGAAAAAG
CGAAGTCGGCGCTCCTTGAAGAGGGATTGTAAAGCCATGATGTGCATCAA
GAGTATTGTCTGTTTTCCTGAACACACTGTCAAACACTCAATTCAAAAAG
CCTCCTCCAAGAAGGCCTgtcgaaaattgaaagcaaGCGCGCTCAACCAG
ATAAGAGATGCATTTTTAAACGGAGAAGCGATCGGCCATCCAGCGTTTTG
GTTGCATGTGCCATTACCTGAAGCTCACACTACGCATGATCTATTTCCTG
AAAACGTGGAGGAGAGGTTGATAGAACAACCAACAGACAGTATGGATGCC
ATCACTCACATCTTGAGCGTGGCCGCACGTTACGGTAGTAAAGTACAAAT
GTCGAGTAAAGGTGCGGATAACGTATTGGAATTACACTTGAATCAGCCGT
CGGCTTCCGGGGAGGAGACTGGCTGAATGCGAAAACCTCGATACACCATC
TTCCTTGGTTATGGAGAAGAAGCAGAAAGCTTATTGAAATTATTCGAGCA
AGTGAAATGTCGCACAGGTATTAGCTCAAACATTCCGTTCATAAAActtt
tgttgacattttttgagAGATCATTCAATGACAATGATGAGGATGAGATT
GAAGCCTCTGAAGCTGTTCCAGGTGACAATAGTTCAGTGCAAAACAATGA
TATTGATTTGAATGTTTCTAAAGGGATTTATGAGTATCCTAACTCACACC
AGCCGTCAAATATCTTGTCAGTAGAAAAATTAGAGGACAACATGAAAGAT
GTTGTAATGACAAAAGAAGTGacagaaaaaaaataccaaCGAAGAAGCAG
TCTAGAAAATAATGACACAAACAAATCGAATGATTCTTTGGAAACCATAG
ACATGTCTACTCTAAGAACGTCGTCAAATCTAGATAAAATAATGGAAGAA
AATTACTCAAACAATTCAGCTGTGCGCCTTTCCTCTTTTAAAGATTGTTG
TCATAACAATCATGAAACAGAAAGCACTATCATCAGAGTCAGTAACAGTA
CTCCATGTGGCCCTGTTGATGATACTTTCAATAATATGGACGATAATATG
GCATGCGCCGTTGCAAAAAGTATTTGCTGCACAAGATTTGTTGATGAAAT
TACAAAAAGCTCCAATGTAATTCAGGAACTTTCTGACCAAGTTGAGGCTG
AAATTGTCAATGTCGATGAACCAGGACCTTCTTTCCCtccaaaaatgatg
aaaattgatgaaattaAGCTCTCAGATGGAATGGAAGATGATAAAGTTGA
TGAAGAATTGCCTAGGGAGCAAGAAAAGGAAGAGATCCCGCAAACTCCTT
TGGATGTCATCAACAAATTCATGGAACACGTACAGAAAGAACTTGATTAC
TACCATGGTTTCATTTCGTCGGGTAGCAAGTTACGAGAGTTCTTAGAAGA
ATATCGAAAAGTTACAAACATGGTTTTTACCGTTCGAAGCTCGCGTTCTT
ATATCAAGAAAAGAGCAGCACTGAACTCAAATATTCTAGATGCAGCACAT
CAGACACTGGGTGAGAGTGACATTACAGAGGAGCGGGCGTTAGATGAAAA
CAATATTACCGAAGAGATGGACGAGGACACTTCATTCGATAAGACGGCTT
CAGAAGATCGAACGAATAAAAAAGAACGTAAAAATTCATCTATCTCAAAA
CCTGAGGATTATGCTGTTATGGACAGTATCATGAcagGTCCACTTCGCTG
GGAATACGACTTCGGTATGCCGCCTATCCCGTTCACTGGAACTCCCTTTT
GTATCATCGGTAATACACATTACAAATGTTTTTATGCGTGTCCAGATTCA
AGAACTTTACGGAAACGAAAATTAACAGAAGACGATCAAACGTTGGAAAA
CATGGTGAAAAAGCGAAGTCGGCGCTCCTTGAAGAGGGATTGTAAAGCCA
TGATGTGCATCAAGAGTATTGTCTGTTTTCCTGAACACACTGTCAAACAC
TCAATTCAAAAAGCCTCCTCCAAGAAGGCCTgtcgaaaattgaaagcaaG
CGCGCTCAACCAGATAAGAGATGCATTTTTAAACGGAGAAGCGATCGGCC
ATCCAGCGTTTTGGTTGCATGTGCCATTACCTGAAGCTCACACTACGCAT
GATCTATTTCCTGAAAACGTGGAGGAGAGGTTGATAGAACAACCAACAGA
CAGTATGGATGCCATCACTCACATCTTGAGCGTGGCCGCACGTTACGGTA
GTAAAGTACAAATGTCGAGTAAAGGTGCGGATAACGTATTGGAATTACAC
TTGAATCAGCCGTCGGCTTCCGGGGAGGAGACTGGCTGAATGCGAAAACC
TCGATACACCATCTTCCTTGGTTATGGAGAAGAAGCAGAAAGCTTATTGA
AATTATTCGAGCAAGTGAAATGTCGCACAGGTATTAGCTCAAACATTCCG
TTCATAAAActtttgttgacattttttgagAGATCATTCAATGACAATGA
TGAGGATGAGATTGAAGCCTCTGAAGCTGTTCCAGGTGACAATAGTTCAG
TGCAAAACAATGATATTGATTTGAATGTTTCTAAAGGGATTTATGAGTAT
CCTAACTCACACCAGCCGTCAAATATCTTGTCAGTAGAAAAATTAGAGGA
CAACATGAAAGATGTTGTAATGACAAAAGAAGTGacagaaaaaaaatacc
aaCGAAGAAGCAGTCTAGAAAATAATGACACAAACAAATCGAATGATTCT
TTGGAAACCATAGACATGTCTACTCTAAGAACGTCGTCAAATCTAGATAA
AATAATGGAAGAAAATTACTCAAACAATTCAGCTGTGCGCCTTTCCTCTT
TTAAAGATTGTTGTCATAACAATCATGAAACAGAAAGCACTATCATCAGA
GTCAGTAACAGTACTCCATGTGGCCCTGTTGATGATACTTTCAATAATAT
GGACGATAATATGGCATGCGCCGTTGCAAAAAGTATTTGCTGCACAAGAT
TTGTTGATGAAATTACAAAAAGCTCCAATGTAATTCAGGAACTTTCTGAC
CAAGTTGAGGCTGAAATTGTCAATGTCGATGAACCAGGACCTTCTTTCCC
tccaaaaatgatgaaaattgatgaaattaAGCTCTCAGATGGAATGGAAG
ATGATAAAGTTGATGAAGAATTGCCTAGGGAGCAAGAAAAGGAAGAGATC
CCGCAAACTCCTTTGGATGTCATCAACAAATTCATGGAACACGTACAGAA
AGAACTTGATTACTACCATGGTTTCATTTCGTCGGGTAGCAAGTTACGAG
AGTTCTTAGAAGAATATCGAAAAGTTACAAACATGGTTTTTACCGTTCGA
AGCTCGCGTTCTTATATCAAGAAAAGAGCAGCACTGAACTCAAATATTCT
AGATGCAGCACATCAGACACTGGGTGAGAGTGACATTACAGAGGAGCGGG
CGTTAGATGAAAACAATATTACCGAAGAGATGGACGAGGACACTTCATTC
GATAAGACGGCTTCAGAAGATCGAACGAATAAAAAAGAACGTAAAAATTC
ATCTATCTCAAAACCTGAGGATTATGCTGTTATGGACAGTATCATGAcag
GTCCACTTCGCTGGGAATACGACTTCGGTATGCCGCCTATCCCGTTCACT
GGAACTCCCTTTTGTATCATCGGTAATACACATTACAAATGTTTTTATGC
GTGTCCAGATTCAAGAACTTTACGGAAACGAAAATTAACAGAAGACGATC
AAACGTTGGAAAACATGGTGAAAAAGCGAAGTCGGCGCTCCTTGAAGAGG
GATTGTAAAGCCATGATGTGCATCAAGAGTATTGTCTGTTTTCCTGAACA
CACTGTCAAACACTCAATTCAAAAAGCCTCCTCCAAGAAGGCCTgtcgaa
aattgaaagcaaGCGCGCTCAACCAGATAAGAGATGCATTTTTAAACGGA
GAAGCGATCGGCCATCCAGCGTTTTGGTTGCATGTGCCATTACCTGAAGC
TCACACTACGCATGATCTATTTCCTGAAAACGTGGAGGAGAGGTTGATAG
AACAACCAACAGACAGTATGGATGCCATCACTCACATCTTGAGCGTGGCC
GCACGTTACGGTAGTAAAGTACAAATGTCGAGTAAAGGTGCGGATAACGT
ATTGGAATTACACTTGAATCAGCCGTCGGCTTCCGGGGAGGAGACTGGCT
GA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042723XLOC_042723Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068495-exon-scaffold_485-1491911889:270472..271480TCONS_00068495-exon-scaffold_485-1491911889:270472..271480Clytia hemisphaericaexon
TCONS_00068495-exon-scaffold_485-1510915933:270472..271480TCONS_00068495-exon-scaffold_485-1510915933:270472..271480Clytia hemisphaericaexon
TCONS_00068495-exon-scaffold_485-1575043694:270472..271480TCONS_00068495-exon-scaffold_485-1575043694:270472..271480Clytia hemisphaericaexon
TCONS_00068495-exon-scaffold_485-1491911889:272136..272557TCONS_00068495-exon-scaffold_485-1491911889:272136..272557Clytia hemisphaericaexon
TCONS_00068495-exon-scaffold_485-1510915933:272136..272557TCONS_00068495-exon-scaffold_485-1510915933:272136..272557Clytia hemisphaericaexon
TCONS_00068495-exon-scaffold_485-1575043694:272136..272557TCONS_00068495-exon-scaffold_485-1575043694:272136..272557Clytia hemisphaericaexon
TCONS_00068495-exon-scaffold_485-1491911889:272719..272873TCONS_00068495-exon-scaffold_485-1491911889:272719..272873Clytia hemisphaericaexon
TCONS_00068495-exon-scaffold_485-1510915933:272719..272873TCONS_00068495-exon-scaffold_485-1510915933:272719..272873Clytia hemisphaericaexon
TCONS_00068495-exon-scaffold_485-1575043694:272719..272873TCONS_00068495-exon-scaffold_485-1575043694:272719..272873Clytia hemisphaericaexon
TCONS_00068495-exon-scaffold_485-1491911889:273655..275418TCONS_00068495-exon-scaffold_485-1491911889:273655..275418Clytia hemisphaericaexon
TCONS_00068495-exon-scaffold_485-1510915933:273655..275418TCONS_00068495-exon-scaffold_485-1510915933:273655..275418Clytia hemisphaericaexon
TCONS_00068495-exon-scaffold_485-1575043694:273655..275418TCONS_00068495-exon-scaffold_485-1575043694:273655..275418Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068495-proteinTCONS_00068495-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_485supercontigscaffold_485:270472..275418 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.77407	2.00386	0.69994	0.576435	5.47368	3.90763	3.24455	3.70644	2.00142	2.98475	2.95777	2.6182	1.94838	1.70544	2.27329	2.45395	2.5637	2.71127	1.51622	1.99862	2.429	2.53392	3.84084	3.83902	3.68345	4.67913	1.95073	1.60983	3.31422	3.35588
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029309CaRF
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068495 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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