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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068376 ID=TCONS_00068376|Name=TCONS_00068376|organism=Clytia hemisphaerica|type=transcript|length=531bp TGGGGTATATCTTGGCCGGAAAAAgATGCGACACGAAAGCTGGTAAATTG TTTAGAAGATAGTATGAAGTGACTTTGAAGACTACTAATAACAGATAAGA TCTATTgtcgaatctgattggtcagGTGTTGGGTAACCTGCAATTTGGTG GATGAGATCGGCATTAAACAAGCAAGGAAAAACTGTCTTTACGTTTCAGA GACACGGGTCTTTCTTTAGATTAGAAACCCTCCTCGTCAATAGAGATTGG AACCATGTCACTTTCACTTTTGACTTCATtaagtttttagaatttataaa aatgttaaaaagaatCAATGATTTATTTGTGAAACATTAGTGAGACACCT TCTTAACGGTAATATTCCCTTTATACTAAGTATTATTTACCTTCTGTTGC AGATTatgagaattttattttatgtaaggcgagaccaatttgattagttg ttttacgggcctgaaaatcgaaataaaaacaaaattcatttTGGTAGTCA TTTTGGTagcatgtttttgttttcattgctt Run BLAST on NCBI transcript from alignment at scaffold_483:179940..181184- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068376 ID=TCONS_00068376|Name=TCONS_00068376|organism=Clytia hemisphaerica|type=transcript|length=1245bp|location=Sequence derived from alignment at scaffold_483:179940..181184- (Clytia hemisphaerica) TGGGGTATATCTTGGCCGGAAAAAGGTATTTCATTTCAAATTTAAATATT
CACCAATTTATCTATTTTCATACTTTTAATAGCCCGGAGATCCATGTTAT
AATTTCTTCTTTTATATACTGATTGCGAAATGAATAGCATGGTTTGGGCT
ACGAGTTTGAATTTCCCAGCTCCAAACGACAGTCGAAAACACAGTCAATC
AAACTCTGTTATCATTTCAATGGATGTACTTTCTTAGAAAAACACAAAGC
TATTTTAATTTTAGTAGGTCTCTCTAAGGGTCGGTTTTCGGAGGTCCCGT
CCGCACATACAATCTCGGTCAAAATACATTGAGAATTTTAGTTAATTCCC
CGTTTTTAGCAATTTAAAGTTCGGGTGAGAAAGATCTTTGGACTAATTGA
TAAATTTAATCAAATATTTCAATTTGGGAGGGGCTTATAGACTTCCAGGC
TATATTCTGAGCCCTATTGGGCCATTCTTGAACTTGGATCCTTAGATCCT
AATCTCTTAATAAGTCTAGCGTTAAAACTCTACTCTTCCAACCTAAGTTA
GAGCGCTTCCAAATTGTTTGTGGCTATAAGATTTCGTGGGAATTTCCCTA
TTTTTTTCAAATATTATGACTTTTATTGTACCCCTCATTCGCCAACCCTA
GTACCCCCCGGATCTTTTCCTACAGATTTGAGATTATTTTCAATGTAACC
ATAGCCGTTTAACCCAAAATCTTTCAAATTCTATTTTAGATGCGACACGA
AAGCTGGTAAATTGTTTAGAAGATAGTATGAAGTGACTTTGAAGACTACT
AATAACAGATAAGATCTATTGTCGAATCTGATTGGTCAGGTGTTGGGTAA
CCTGCAATTTGGTGGATGAGATCGGCATTAAACAAGCAAGGAAAAACTGT
CTTTACGTTTCAGAGACACGGGTCTTTCTTTAGATTAGAAACCCTCCTCG
TCAATAGAGATTGGAACCATGTCACTTTCACTTTTGACTTCATTAAGTTT
TTAGAATTTATAAAAATGTTAAAAAGAATCAATGATTTATTTGTGAAACA
TTAGTGAGACACCTTCTTAACGGTAATATTCCCTTTATACTAAGTATTAT
TTACCTTCTGTTGCAGATTATGAGAATTTTATTTTATGTAAGGCGAGACC
AATTTGATTAGTTGTTTTACGGGCCTGAAAATCGAAATAAAAACAAAATT
CATTTTGGTAGTCATTTTGGTAGCATGTTTTTGTTTTCATTGCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00068376-exon-scaffold_483-1575043694:181160..181184 | TCONS_00068376-exon-scaffold_483-1575043694:181160..181184 | Clytia hemisphaerica | exon |
TCONS_00068376-exon-scaffold_483-1575043694:179940..180445 | TCONS_00068376-exon-scaffold_483-1575043694:179940..180445 | Clytia hemisphaerica | exon |
TCONS_00068376-exon-scaffold_483-1510915933:181160..181184 | TCONS_00068376-exon-scaffold_483-1510915933:181160..181184 | Clytia hemisphaerica | exon |
TCONS_00068376-exon-scaffold_483-1510915933:179940..180445 | TCONS_00068376-exon-scaffold_483-1510915933:179940..180445 | Clytia hemisphaerica | exon |
TCONS_00068376-exon-scaffold_483-1491911889:181160..181184 | TCONS_00068376-exon-scaffold_483-1491911889:181160..181184 | Clytia hemisphaerica | exon |
TCONS_00068376-exon-scaffold_483-1491911889:179940..180445 | TCONS_00068376-exon-scaffold_483-1491911889:179940..180445 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_483 | supercontig | scaffold_483:179940..181184 - |
Blast
The following BLAST results are available for this feature:
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