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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068301 ID=TCONS_00068301|Name=TCONS_00068301|organism=Clytia hemisphaerica|type=transcript|length=1156bp
cctcattgttcttataaaaggaaAAGCGTCTATTCAACTATTGGAAAAAA
TGTAGTTTAGATTTAACTgtatgaaaatattattttcaaaacattttcct
aaaaatttggattttacaAAAAACCTTGACCATCGGCCTTCTTGAGCTGC
TACTAACAAGAAATAAATAATGTCATTAGTTTTTAGCACATGCACTTTTA
ATCAGCAGGATTCAAAGGGTTTATTCTATTATGAGTACCAAATAAAGTTT
TTACAGCCTTTCGAAGCTTGGTTTGTGTCGCAAGGTAAACAAAAGGGTTC
GAAACCAGATAAATAATTCGAAATATGGCGTCATAAATTCGTAATTGGTC
ATTAAATACAATCATTATAATGCCAGTTATTATTTGAGGTGTCAGAAATA
TGACTGTCCAGATATTAAGAATCGTAACATCTTTAATACTCATTTTCAGT
TCAATAAGTTTCGACATTCTTTCTTGTTGGAAGCCATCATAAATAGTTCT
ATTTCTTAACTGAGCGATATTCCTTTTTCTGATCCTTTTAACAGCGAAGC
CTACAAGCAGAGCAACCAAAATGGTTAAAGTTCGAACAACAACATCTAAA
CATAACACACCAAAAGTTgtattcaaaaaataatcattGAAATGTCGAGT
CCATTTACTGACGGTGATGACTAAAACTCCACAGACGGCAAACGTCAATG
CCGTCAATAACAAAATACGACGTCGTGTCACTAGACGGTAATATTTCAAA
CAATATCGCATCTCCAGAAACCTGTCACCAGTTATGAATACAATCTGTAG
ATTTGACATGATGCCGAATAAATAAAAGAAGATTGACAGAAGCTCGTAAA
CTGTTTTCTGATGTTTAAGCTCTTCACGAAAGATGATAATAAAAATGATA
ATTGCTGGTTGTAAAGCGTCAATCAAGGATAACAACTGGATCAAATAAAA
TCGGTGACTATGCAGTTTCGCTTTTTGGATCATGAAGATCACGAATAAGT
TTAGTATAACAATTATAATTGCAGTGTAACAGTCCCATCTAACGTGTGCC
ATGACCAGTAGAACTTCTCAATCGAAAATGTGATAAATTTCTTTCACTTT
CAAACCATGAAACATGTTTGTTGAAACGTAATATCATTATAAGGTTATCA
AGAaac Run BLAST on NCBI transcript from alignment at scaffold_482:336981..338136- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068301 ID=TCONS_00068301|Name=TCONS_00068301|organism=Clytia hemisphaerica|type=transcript|length=1156bp|location=Sequence derived from alignment at scaffold_482:336981..338136- (Clytia hemisphaerica)
CCTCATTGTTCTTATAAAAGGAAAAGCGTCTATTCAACTATTGGAAAAAA
TGTAGTTTAGATTTAACTGTATGAAAATATTATTTTCAAAACATTTTCCT
AAAAATTTGGATTTTACAAAAAACCTTGACCATCGGCCTTCTTGAGCTGC
TACTAACAAGAAATAAATAATGTCATTAGTTTTTAGCACATGCACTTTTA
ATCAGCAGGATTCAAAGGGTTTATTCTATTATGAGTACCAAATAAAGTTT
TTACAGCCTTTCGAAGCTTGGTTTGTGTCGCAAGGTAAACAAAAGGGTTC
GAAACCAGATAAATAATTCGAAATATGGCGTCATAAATTCGTAATTGGTC
ATTAAATACAATCATTATAATGCCAGTTATTATTTGAGGTGTCAGAAATA
TGACTGTCCAGATATTAAGAATCGTAACATCTTTAATACTCATTTTCAGT
TCAATAAGTTTCGACATTCTTTCTTGTTGGAAGCCATCATAAATAGTTCT
ATTTCTTAACTGAGCGATATTCCTTTTTCTGATCCTTTTAACAGCGAAGC
CTACAAGCAGAGCAACCAAAATGGTTAAAGTTCGAACAACAACATCTAAA
CATAACACACCAAAAGTTGTATTCAAAAAATAATCATTGAAATGTCGAGT
CCATTTACTGACGGTGATGACTAAAACTCCACAGACGGCAAACGTCAATG
CCGTCAATAACAAAATACGACGTCGTGTCACTAGACGGTAATATTTCAAA
CAATATCGCATCTCCAGAAACCTGTCACCAGTTATGAATACAATCTGTAG
ATTTGACATGATGCCGAATAAATAAAAGAAGATTGACAGAAGCTCGTAAA
CTGTTTTCTGATGTTTAAGCTCTTCACGAAAGATGATAATAAAAATGATA
ATTGCTGGTTGTAAAGCGTCAATCAAGGATAACAACTGGATCAAATAAAA
TCGGTGACTATGCAGTTTCGCTTTTTGGATCATGAAGATCACGAATAAGT
TTAGTATAACAATTATAATTGCAGTGTAACAGTCCCATCTAACGTGTGCC
ATGACCAGTAGAACTTCTCAATCGAAAATGTGATAAATTTCTTTCACTTT
CAAACCATGAAACATGTTTGTTGAAACGTAATATCATTATAAGGTTATCA
AGAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068301-exon-scaffold_482-1575043694:336981..338136 | TCONS_00068301-exon-scaffold_482-1575043694:336981..338136 | Clytia hemisphaerica | exon |
| TCONS_00068301-exon-scaffold_482-1510915933:336981..338136 | TCONS_00068301-exon-scaffold_482-1510915933:336981..338136 | Clytia hemisphaerica | exon |
| TCONS_00068301-exon-scaffold_482-1491911889:336981..338136 | TCONS_00068301-exon-scaffold_482-1491911889:336981..338136 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_482 | supercontig | scaffold_482:336981..338136 - |
Blast
The following BLAST results are available for this feature:
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