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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068275 ID=TCONS_00068275|Name=TCONS_00068275|organism=Clytia hemisphaerica|type=transcript|length=517bp
AGGAAAAACAATTACATCACCAACATTCCTGTGGTTGAAAAAGCTTTCCG
CTACACAATGGAAATCAAACCTGTCGGTGTTCGCCCTGGGTGGACGAGCA
TCTTCCACGCCACCAGGAACGTGAAAGGGAATCGAAACTGTTGTGGGTAT
GGAAGTCGTATTCCTGCTTTATTCTTTCATTCCAACACAACCAAGTTACA
TACCACAGCCTCCATCAATGGTAGAGGTAACTTTTACATTAATAACGATA
TGGATATGGATCGATTCACTGTAGTGACAATTGAACAATCGAGACAACAT
GACGGTCAATATCGATTCTCATTGATGTTTGACTACATCGAGGTGTATAC
AGTAATCAACAAGCAACCTGAAGTTTTCAAAGATGTCAGTATCTACATCG
GTGACCCGTGGTACGAACCAAGCAATGTCGTCGTCCGAAATTTCCACTTC
GAAAATCTACATTCTTAGTTCttcattcaaaatattgttattgTCTTTAT
TCAAGAATATATCAAGC Run BLAST on NCBI transcript from alignment at scaffold_482:412243..413182+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068275 ID=TCONS_00068275|Name=TCONS_00068275|organism=Clytia hemisphaerica|type=transcript|length=940bp|location=Sequence derived from alignment at scaffold_482:412243..413182+ (Clytia hemisphaerica)
AGGAAAAACAATTACATCACCAACATTCCTGTGGTTGAAAAAGCTTTCCG
CTACACAATGGAAATCAAACCTGTCGGTGTTCGCCCTGGGTGGACGAGCA
TCTTCCACGCCACCAGGAACGTGAAAGGGAATCGAAACTGTTGTGGGTAT
GGAAGTCGTATTCCTGCTTTATTCTTTCATTCCAACACAACCAAGTTACA
TACCACAGCCTCCATCAATGGTAGAGGTAACTTTTACATTAATAACGATA
TGGATATGGATCGATTCACTGTAGTGACAATTGAACAATCGAGACAACAT
GACGGTCAATATCGATTCTCATTGATGTTTGACTACATCGAGGTAAAAGA
AAGAGATttggttttcttcattttatacACACAAAAATATAAGCTCATAT
GTCTTGcagaaaaaaatatcgaatcaCAGACTTTCCTTTCACAAATCCTC
ACGTTGAGTCGTTGAGTAATAAATCTAGATTCTAAATATtgcattaaaat
atttttgtaggaCGGGATGAGAAGAACCGTCTTCTATTCACACGTTTAAG
ATATTGCTAAGTTAAATCCACCACTCTGACTCAAGCAGGTACCTTCAAGC
ACCATCTTTTACTTAGTACGAAAGCTTTGGTATAACCTGGCCAAGGCGAT
TGAAAGAACTTCCGCACCGTAGTCGAATGCTATAATTTCATGCTATGGCC
GTTTAGTAATCAAAACATGTTAAAAATACTGCTTAAGTGAAATTCCACCA
TTTTGACTATTTCAGGTGTATACAGTAATCAACAAGCAACCTGAAGTTTT
CAAAGATGTCAGTATCTACATCGGTGACCCGTGGTACGAACCAAGCAATG
TCGTCGTCCGAAATTTCCACTTCGAAAATCTACATTCTTAGTTCttcatt
caaaatattgttattgTCTTTATTCAAGAATATATCAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068275-exon-scaffold_482-1491911889:412243..412584 | TCONS_00068275-exon-scaffold_482-1491911889:412243..412584 | Clytia hemisphaerica | exon |
| TCONS_00068275-exon-scaffold_482-1510915933:412243..412584 | TCONS_00068275-exon-scaffold_482-1510915933:412243..412584 | Clytia hemisphaerica | exon |
| TCONS_00068275-exon-scaffold_482-1575043694:412243..412584 | TCONS_00068275-exon-scaffold_482-1575043694:412243..412584 | Clytia hemisphaerica | exon |
| TCONS_00068275-exon-scaffold_482-1491911889:413008..413182 | TCONS_00068275-exon-scaffold_482-1491911889:413008..413182 | Clytia hemisphaerica | exon |
| TCONS_00068275-exon-scaffold_482-1510915933:413008..413182 | TCONS_00068275-exon-scaffold_482-1510915933:413008..413182 | Clytia hemisphaerica | exon |
| TCONS_00068275-exon-scaffold_482-1575043694:413008..413182 | TCONS_00068275-exon-scaffold_482-1575043694:413008..413182 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_482 | supercontig | scaffold_482:412243..413182 + |
Blast
The following BLAST results are available for this feature:
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