XLOC_042614 (gene) - C. hemisphaerica

Overview
NameXLOC_042614
Unique NameXLOC_042614
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_482:408916..416558+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042614 ID=XLOC_042614|Name=XLOC_042614|organism=Clytia hemisphaerica|type=gene|length=7643bp|location=Sequence derived from alignment at scaffold_482:408916..416558+ (Clytia hemisphaerica)
AATGAAAGTGTCAGATTTGGAATTGACGAAAACAAAGCATAGAAGTGCAA
TACAAAAAATGCTTACTTCGTTACAGGGAAATTTATCCAGGATGAACTTT
TGGACATTCATCTTGGTTGCCATAGGTTACTTGGTAGCCAACCCAATCAT
CGCACAGCAAGGTGAGAATGTTTGTTCGTTTCCAAGGAAGGTTTCGGTTG
GAAGGACCGACGTTCAGCTGACATCTATAAAATGCAAAGGcattcgacat
ggaaaaaaataatttcaattgcTTACCTGAAAGAacataaaaagtataaa
atacaCCACTTTTCTGACGTCACAAGTTATTAAGTGAATCTGTTATTAAT
GGTTTTATTTTCACATaggtgttcccgtttcatattagacacatatttca
tatcaggacagtgtctgtttattgttatattaatcagatataagcaaaaa
aatgtttttcttttcctctttcatatacatccgtgtcaatccaatgtgaa
aaaagcttgtaaattaaaattgatgagtaaacaaacgatatcactcttat
tcaaaaacaaaacctttaagttcgAAACGTTTGAGATCAATTCACataac
attttttaacaaaGTGAAGAAGTTTTGGTTCTTTATTCTACATCGACTga
actcaaaaaatatataattttgacCTGTCATAGTTGACGGTGGTTACGGA
CCATGGTCTGAATGGACGCCTTGTGAGGTCACGTGTGGAGATGGACTGCA
GTATAGAGAAAGAGGTTGCAATGAACCTTCACCGTCAAATAGCGGATTGG
ATTGTGAACATCTTGGACCTGCTTCAGAAACAAAACCGTGTCGTTTGAGA
TCGTGTCGCGGTGAGTTTAGATATTAGATGAAAGGAACTTTTAATACTCT
ACCAgtctaattttcattttaatcgAATCTACCTTTACCAGAAATTACGC
TTGTTACCCGCAAAATTACCTTAAACATACAATCTCTCGTTTCCCAAAAG
TGTTCTAATGCTCAAATACTCACAAAACCAGAGTTCATTAGACAAAGTTT
ATCTTTATTCTTTCAGGTATCGATTTGAAAAGAGGCAATTTCTTGAAATC
AGTGGACATCCAGAAAACATATCAATTTACATTCGAAATCAAGCCAACCG
GTATCAAAGAAGGCTGGACAAACGTTTTCCATGGGTATAATTTGGACGGT
AATTGTTGTCATTTTGGGCAACGTATACCTGCTCTCTTCATGAGATCAAA
TACATCACGGCTAATGACCGTTGTACCTGTCGGCAACAACAGTAGGTACC
AAGTCAATGAATGGCTCCCCATGCATGAAGCCACAAACGTTACAATTAGA
CAATCGCTTCGTGCAGATGGAACCTACAGATTTGCTTTGTACTACAACGA
GACTCGCATTGACATGAGTGTAAATACAGAACCAAGAGTTTATAAAAATG
TCTCATTGTACGCATCAGATAAATGGTATCAACCATCTCAAGTTGAACTT
GGATATTTCAATGTCGAAAGTCCTATTGAACCTGACTGTAAGTATCAATC
TTTCTTTTGGAAACATAGTCTGATAGAAATAGCTTAAACAAGGTTCGAAC
CTTTCAAATAAATCATatgtggttgaaatttggcGCAGAGGTTTCTTTTG
GGTTCAAGAACCACCAAGAAAAACCCCCAAGGcgatttaaaaagttttag
acCCTTTTTTTAGGGTATTTCATGGTGACGTCAATGTTCAGTACAATTAG
CCACTGGAACGAACAAGAATCTCAAAAACACTTCGACTGTTTTTATCTGA
AAGATAATGAAAATTAGATAACGAAAATCGCGTTAAATTTGCGTCAATTA
GAAAAACTGACCTCCAGGCAGAAACTGTTTGAGTAGTACTGTACTCACCA
GAGCTAAATGTGCCATTGCagcaaacaaaaaccaaaattgtCTTGAGATC
TAAATCACAAACACTCCTCACATTGAGCTCATTTCTTTCTTGATTTCTCA
ACAGATTTCAAACCACAACGTGGCTTCATCCGCCAACACATCCCACTGAT
GGATAGAACCTATGAAATTTCGTTCACAATTCAACCAAACAAAGCTCACT
ATGGAAACGAAATAAACGGCGTCTTTAGAATCTCTCATAATGAAACTTTA
GGAAGTAACTGTTGCAAGAAAGGTAATTACTTATGATTCTTCGGGCTCGG
ATGTACATAACTCGAATGTATCCTTAACTCGGACAAGTTTGCTGGCCACT
TCAtctaacaatgccttataaaccttactccatatgGAAGACTCAACTGT
ATTTATAATCCAATGGTATTCGCACGTCTTCATTCGGGTCCAATAGAAAG
AACCACATATGATcatgagagaaaaaaagaacataaGTTTCATTCAATAA
CGACATTTTCTAGGTTCCAACATTCCAAACTTGTTGATCACCGACAGATG
CAAATTATACATCCTAAATGACGGTAATAAACCCGTCAGTCGAACATTGA
ACCCCTTCAGAATGACGTCAGTCAAGATTAGACAAGAGTTGACGTCATTT
GGTTTGTACAGGTTAGTGGAGTTCATTTCTATCNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCAAGGAAAAACAATTACATCACCAA
CATTCCTGTGGTTGAAAAAGCTTTCCGCTACACAATGGAAATCAAACCTG
TCGGTGTTCGCCCTGGGTGGACGAGCATCTTCCACGCCACCAGGAACGTG
AAAGGGAATCGAAACTGTTGTGGGTATGGAAGTCGTATTCCTGCTTTATT
CTTTCATTCCAACACAACCAAGTTACATACCACAGCCTCCATCAATGGTA
GAGGTAACTTTTACATTAATAACGATATGGATATGGATCGATTCACTGTA
GTGACAATTGAACAATCGAGACAACATGACGGTCAATATCGATTCTCATT
GATGTTTGACTACATCGAGGTAAAAGAAAGAGATttggttttcttcattt
tatacACACAAAAATATAAGCTCATATGTCTTGcagaaaaaaatatcgaa
tcaCAGACTTTCCTTTCACAAATCCTCACGTTGAGTCGTTGAGTAATAAA
TCTAGATTCTAAATATtgcattaaaatatttttgtaggaCGGGATGAGAA
GAACCGTCTTCTATTCACACGTTTAAGATATTGCTAAGTTAAATCCACCA
CTCTGACTCAAGCAGGTACCTTCAAGCACCATCTTTTACTTAGTACGAAA
GCTTTGGTATAACCTGGCCAAGGCGATTGAAAGAACTTCCGCACCGTAGT
CGAATGCTATAATTTCATGCTATGGCCGTTTAGTAATCAAAACATGTTAA
AAATACTGCTTAAGTGAAATTCCACCATTTTGACTATTTCAGGTGTATAC
AGTAATCAACAAGCAACCTGAAGTTTTCAAAGATGTCAGTATCTACATCG
GTGACCCGTGGTACGAACCAAGCAATGTCGTCGTCCGAAATTTCCACTTC
GAAAATCTACATTCTTAGTTCttcattcaaaatattgttattgTCTTTAT
TCAAGAATATATCAAGCCTGTAATCCTATTTCATAAATGTACTAGTTTTT
TTAAGTAGCGaggatacacgcttttttttataNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNACCTTACTCCATATGGAAGACTCAACTGTATTTATA
ATCCAATGGTATTCGCACGTCTTCATTCGGGTCCAATAGAAAGAACCACA
TATGATcatgagagaaaaaaagaacataaGTTTCATTCAATAACGACATT
TTCTAGGTTCCAACATTCCAAACTTGTTGATCACCGACAGATGCAAATTA
TACATCCTAAATGACGGTAATAAACCCGTCAGTCGAACATTGAACCCCTT
CAGAATGACGTCAGTCAAGATTAGACAAGAGTTGACGTCATTTGGTTTGT
ACAGGTTAGTGGAGTTCATTTCTATCttagaaaattatttatttaacTAA
CCGAAGGAGGCTTTGCGAAAAgaagttttaaagttttgttaagttacgta
acttcaACCATTATGGacgcaaacgttcgaatctgtagatGTGATCCCTa
gcgcaaatcgaacgtttgcttccaaaATGGCGGAATCTgcgtaacttaac
aaaacatggAAAACCTTTAAAAGAGCTTTTAAAAAAATGCTATGTGATTC
TAAAAAGAGAGAACAGAGGCTTTCATCCGACCGTAATACGAATTTCGTGT
GCAAAACTCTACGTTAAAAGGTGTCAGGCTCAAATTTGATTATTACTTCA
AGTAATTTGCACTTCTGTTAAAAGCGCTAGAACTCTGATTAATAAATATG
TGTTTTAGTTACACAATCCACTTGGATGGGAAAGAAGTTCACCAAGTTTT
CAACCAGAACCCTGCAACATACAAAGGAAACACTTTATACACCAGTGATC
CATATCACAATGCAGCTGACGTCATCGTTCAAGACCTCAAGATCGTCTCA
CCTCTTCCAATGAACGGTAAGAAGTTGCAGTGCATTATGGgaaagtaagt
ctgcgacccgaaggctcctctttaaatggctatctacccgaaggtaggga
agggcgccactctttctccgtggatttctccacttacccttgatcctttt
cttaattgttgagcatcaagcagagaggcatcaagtaccattttgagaat
atttggtatgacccggctggggaacccacaaccttgcgagcCGTAGCCGG
ATgttctaccactgcactacggtcgcaaTCATCAAGTTTAGCCTGAAGGC
CTAAAGAGGAATCCTCTCAACTCTCTCTCAAGCAAGAAAAGGTGAAGCCT
AGATTTGTACAGCTTTCAGAAGGACGGAATGATCGAATCTAGCGCTTTCT
GGCGaaagtttttaatttcaatACGCCCCTTCTAACAGACCCGGAAGGGT
GTTGCATTGCACAAACGCGGAAAAAAACTTCTcatgtccccaagccttta
gtgTGAAACCCACGCCGGTCACGCGTTTCGAAAGGGAGataaatggcttc
atttcccaaTCAAACGTTTCATCTGTTAGCCCCCTTCAGGTTTTTAAATT
CAACGTGTGCAATACATGGCTGGGTTCGTCCAGAAAGCTAATGATTGATT
AACTCTACAAGATTGGTGACATACATATCGAACAATATGGTCTTCCTCTT
TTAGTGTACGTACCAAGGAAAAACAATTACATCACCAACATTCCTGTGGT
TGAAAAAGCTTTCCGCTACACAATGGAAATCAAACCTGTCGGTGTTCGCC
CTGGGTGGACGAGCATCTTCCACGCCACCAGGAACGTGAAAGGGAATCGA
AACTGTTGTGGGTATGGAAGTCGTATTCCTGCTTTATTCTTTCATTCCAA
CACAACCAAGTTACATACCACAGCCTCCATCAATGGTAGAGGTAACTTTT
ACATTAACAACGATATGGATATGGATCGATTCACTGTAGTGACAATTGAA
CAATCGAGACAACATGACGGTCAATATCGATTCTCATTGATGTTTGACTA
CATCGAGGTAAAAGAAAGAGATttggttttcttcattttatacACACAAA
AATATAAGCTCATATGTCTTGCAGAAAAAATATCGAATCACAGACTTTCC
TTTCACAAATCCTCACGTTGAGTCGTTGAGTAATAAATCTAGATTCTAAA
TATTgcgataaaatatttttgtaggaCGGGATGAGAAGAACCGTCTTCTA
TTCACACGTTTAAGATATTGCTAAGTTAAATCCACCACTCTGACTCAAGC
AGGTACCTTCAAGCACCATCTTTTACTTAGTACGAAAGCTTTGGTATAAC
CTGGCCAAGGCGATTGAAAGAACTTCCGCACCGTAGTCGAATGCTATAAC
TTCATGCTATGGCCGTTTAGTAATCAAAACATGTTAAAAATACTGCTTAA
GTGAAATTCCACCATTTTGACTATTTTAGGTGTATACAGTAATCAACAAG
CAACCTGAAGTTTTCAAAGATGTCAGTATCTACATCGGTGACCCGTGGTA
CGAACCAAGCAATGTCGTCGTCCGAAATTTCCACTTCGAAAATCTACATT
CTTAGTTCttcattcaaaatattgttattgTCTTTATTCAAGAATATATC
AAGCCTGTAATCCTATTTCATAAATGTACTAGTTTTTTTAAGTAGCGagg
atacacgcttttttttataagaatggtgtaaatcaatttcatcatggata
ttcttaacttttttgggaaaatcatcctaaaatattcttacag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068273TCONS_00068273Clytia hemisphaericatranscript
TCONS_00068274TCONS_00068274Clytia hemisphaericatranscript
TCONS_00068275TCONS_00068275Clytia hemisphaericatranscript
TCONS_00068276TCONS_00068276Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068274-proteinTCONS_00068274-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_482supercontigscaffold_482:408916..416558 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2	0.34	1.23	0.37	0.44	0.64	0.89	1.16	0.6	0.24	0.33	0.49	52.8	32.1	1.82	8.29	0.35	0.7	9.7	17.54	0.24	0.33	0.92	0.42	10.66	15.18	0.32	0.17	0.64	1.22