TCONS_00068258 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068258
Unique NameTCONS_00068258
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3203

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068258 ID=TCONS_00068258|Name=TCONS_00068258|organism=Clytia hemisphaerica|type=transcript|length=3203bp
GTGAAATGCAAAATTAATGTATTTTTTTGATGTTGTGACAAGTGAAGATG
AAAAGGGAATGGCAATGAAGAGAGTATTGGAACTAGAGAAAGAACTTCTG
GACATGCGCAGTTCGAAGaatgaaagtgaagaagaagtGAAAGGGTTGAA
ATATGAATTGGGTGGTcttcaaaagaatttcaaagagTTGAAAGATTCAT
CAGCAGCATCTCTGGAAGAACTGGAAAAATTCGAAGTCACACGACTTTCA
GATGAAAACGAGGctctaaagaaagaaaatactgACCTGATGAAACAAGT
GGAGAACTCCATGACGCAACAAATTGCAGACCAGAAAGAATGCGAACTCT
TGAAAACTGATCTAAAAAACAAAACTGAAGAAATGAAAGTGTTGAAATTA
CAagttgatgaaatgaaaagtcAACTTCTCAATTCTATATCCAGTAATAA
TGAGTCGCTTCAGGTCATTGAGGAAGCGAAgaaagaaataaagcaaatga
CTGAGAGCATGAAACAGAAAGAAGAAACGCTCAAACAACAAATTACTCAA
CTTGAAAATGATTACAAAGCAAAAGAAGACAAAATTAACAACGAAAAAGA
TTCCCTTCTAAAAGAGCTAAATGAAGAACgagagaaagtgaaagtgaaca
ACAGTGAAATCAAAGTGTTGAAGAACGGAATCGAAAAACTGATCAAAGAG
AAGACTGACGAAAAATCTTTCAGAATCAAAATAGCAGAGCGTTTAAAAAT
GATTATTGAAGAGAAAAATACTATGGAAGGTGCTTACAAACTCGACCTGC
AACAAGTGTCACGCGATTTTGAAGACCTCAAAAAACACTTCGTTCACGTT
ACAAGCGACAAAGcagaaatgtttcaaaaattaagCGACGCTGTGTTCGA
GAAATGCAAGAAACAACGCTGGGTACCTGACATTGAATCAGAAAATTGTA
CAAATTGTTGTGAAAAATTCTCTTTCACTCTCAGGAGGcacCACTGTCGA
ATGTGTGGTCACATCTTTTGTTTCAAATGTTCCGATCGATGGTTGCTTAC
TCCACACAGTAGCAAGAGAGTTCGTGCTTGTGATGTCTGTGCGGACACGT
ACACAGAACAACATTTGGATGCTGAACCAGGGCGTGATATAGATATGACT
GACGCCCCTCCACAACAAATGTATAGAGAATTGAGAGGTGAAGAAATCAC
AAAGTATGAAAAGGAGTACCAAGAGGACGAAGATGCAGAAGACGATGGTG
GACCTGGTGAAACTTCTCGTTTGCTGGAGAAAGGAAAATGAGAATAGATC
AAACAGAAACGAATTAGATCAGATCTACGTAACCTTCCTTCATCATCGTC
CTCCAAAAAGAAGCTGATTTCGTCATAACTCTGTCCCatattacaccccc
ttctcacagacccggtattcaaccagtggggataaaaataacagactgaa
aATCGATGGGGGttgatattctcatatttttcatggctgggaatttcaat
tcttttcttttcaagtcAATAAAATTCAGCAGGGATGGGAAAAAATAGTa
agtattttgcagtgaggattggtttaattgattattttcagcgaggACAA
AGGCTGGAGGATGATTTTCCACTGCGGGGAccatattttggccaattttt
ccagtgggaaggatttccagtggggctgtgagaaGGGATACATATAGGGA
TATTACACATAAAAATGCATACAATTTTATTCCACATATTATATTAAAAC
GAAAAATATATTCTGGTAACGTATACCATGTTTTTAAcgaattaaaattt
tttgattgctGTAAATAAGAATTTCCAATTTATTCTTAGAattcatttct
ttattttctatcagaatttatactttttataacacacattaatttcttta
ataaagAAACAAGCTAAGGCTAACGCAACATAAATTATATCATTCCTTTT
TCCCAGCGGTGTGTAAGCGAGCGTGTTACCCCAATGACAATGTCTATACT
ACTTTGAGACAACAAGTTTATAAataacaaaaacattcaaacccaacaaa
aatttataaaaatacaaaataaaaattattgttCATTTAACCTATATTTC
TTGTCTCTTTCGTTGCCATTTTAGAAATAGAACTTTAGTCATCAATTCCG
ACTACTCTTTCCAATTGTATAACCTTCAAGTTGGAAAATCAATTTTGGGT
TCTTTTGTCTAATGGAAGTCTTGATACTTCTCCGCCatttaatttcaatt
ctttATCCATATTCCAGAATACAACAGTTCATTTCATAGACTTGCTTCTT
CTGAATTGTTCGAAGATCTGTCTTTTCTTTCTCTTCCCATCCTCCCAGAC
TTCTTGGTGAGATTTCTGAGCAAACAGAACTTCAAATTCATCATCTCGAC
TACCAGTGGCTGTAGTGGTTACGATTGCTTTATGGTGATCAAAACCATTG
GTGAACTGGTAATCTCTGGAAGATTGATGGCCACCAGAGACTGCTCCTCC
ATAACTTACCACAGCATTTGATCCAGGGTATGTATTATAGGATGACTGGT
ACATCGAATTCCCTGCATATGCACCGTTTCGATGATTCTGGTTGTTCCCA
AATTGCCAGGGTTCAATATTGACCACATCCGAGGTTGTACCAACACACCT
GTTAGCATACTGCTTTACCATCCGTTTCGCTTCCTCCTTCTTCAACTCGA
TAAACTTAGACAACTCTTGAGACATTGTCCAATGGATCTGTTCAGTATCG
GTAGATATTGGATATACATGCCGTTTCTTCAGAATAGGTTCTTCGAAGAT
GCATCGGTTCATATCATGCCAGAGTTGTTCAAATTCGATTCCTGTTTTAC
ATCTTACCATTCGCATCATGAGGTTTTGGAACTCTTTGGCAGATCTGATA
TGTTTGTGTTTTCTCTCAGCTGGTTGTAACACAGCGTACAGACAAACTAG
GAATGTTAGCGTTGCCACTAACCCAGCAATGATGAATATAGTCACCGTTT
GTAGTAATGCCAACAGAGTTGCAACAGCTCCAAAGATTGCCATAGCTGAC
AGAaggattttattgattttgttcCAGTAGCGTGATGCCCACATATGACT
TTTGTATTTGGCTTCGGTCTTCTGGATGAAGGTTTTCCATTTCTTGGTCA
TCTCCTTGAGGACTTCTTGGCCAATCTTCTTGAGCTCAATATCTTTATCC
GTC
Run BLAST on NCBI

transcript from alignment at scaffold_482:213114..220878+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068258 ID=TCONS_00068258|Name=TCONS_00068258|organism=Clytia hemisphaerica|type=transcript|length=7765bp|location=Sequence derived from alignment at scaffold_482:213114..220878+ (Clytia hemisphaerica)
GTGAAATGCAAAATTAATGTATTTTTTTGCAGGTATTCAATAACCATATT
ATCTTTTATTAAAGATTGACTTTGTGATTATCAAACTGCCCCAAAAGTTT
AATTCATAAAAGCCTTTGCTTTTATAGCGTCTAGCCAAGGAAGTTAATGT
ATTTCTTTTTATCTCTTTATGAACAGGATGTTGTGACAAGTGAAGATGAA
AAGGGAATGGCAATGAAGGTAATTTTACCATCTTCTTCTGCTTTGTGCAT
CTAAACATTTTCATCcaagaaaaaagaagattttgttttcattgaaagtt
tttcttaatCTAGGATTGGTTTCTTACTTACTTTCTCACTtatacactcc
cttctcacagaaccgATGGGATTTTTCATGACACTGGGAAAAATCTCTAT
AGAGATCGATACTATAAATTCTTTCATGATTTTgcatttgaattccattg
ttttcaagtcagaaatacgtatggaaaaaatagcacaatattttgcagtg
aggatttatttgtttatttgattgttttcagcAAGGACAAAAATATTATG
gtaaatttttccagtgggaagaggTTCCACTGGGAcagtgagaaaggggt
gtcttatatacccctgtctcacagctggTGGAAATCCTTCCAACATTGGG
GATGGAAATACACTTCTTTTCGTTGGATTTCAAATGGGGGATGAAGACAA
AGTTGATTTGTCAGTGAGGCTGAAGTCTTGGGCTATTTTCTCcaacgggg
acgaaattttggtcaaatttttctGTGACTGGTTTTCATATCTGATGACT
TTATTTCTAGAGAGTATTGGAACTAGAGAAAGAACTTCTGGACATGCGCA
GTTCGAAGaatgaaagtgaagaagaagtGAAAGGGTTGAAATATGAATTG
GGTGGTcttcaaaagaatttcaaagagTTGAAAGATTCATCAGCAGCATC
TCTGGAAGAACTGGAAAAAGTAGGTTTGTCTTTGAATTTGAATTCTACAA
TTTGGTATGACTGGACCTCTAAGAATTCCTTCCCCTCATGCCAGTGAACT
CGAACTTCACGCATTTAcgcaattttttcaaattcgctTTCACGCTAATT
TATCTCGAGTTTCATACAAGctcgattttcaaaatatctggaaatatttt
gggaaaaatcTGCAAATTCGCGAATGATGggtagaaaaaagggaaaattc
acgtatttgTGCAAAAATAGTACAGATTCGctcattcacgcaaaccgctg
ccCCTCTCATATTTTTTAAGTTCTGATGACAACACGAGGCTTTTAATGGA
ACTCTCAAATTTTCTGGTGATTGTACTCATTGTTATAATTACCTCTTTTT
ATTTACAGTTCGAAGTCACACGACTTTCAGATGAAAACGAGGctctaaag
aaagaaaatactgACCTGATGAAACAAGTGGAGAACTCCATGACGCAACA
AATTGCAGACCAGAAAGAATGCGAACTCTTGAAAACTGATCTAAAAAACA
AAACTGAAGAAATGAAAGTGTTGAAATTACAagttgatgaaatgaaaagt
cAACTTCTCAATTCTATATCCAGTAATAATGAGTCGCTTCAGGTGAGTAT
TTGACTACAGTGTATccagaaaaaaacaacttttagaGTGCCTGATTTTA
AAAACTGTTGTATGccttcattttatgttttttgtatTAAAACTGCAAAT
CACACTGCCTTTAAACTAACACTGAAACTTCTTAACCAATTAAGTGCCAC
TCTGGAAAAGACTAGTATCTAATAAAAAGGTATTCGATGAATCAAGAGCA
GGAAAGATTCTATACAATAgcacattttttctttataaacaaccAAGTCC
CGAGTCTTCATATTAGCTGAACTTGTTTTACTCTCTCGCAAAGTAAAAGC
TTACCGTGACAGACAATAGCCCTTGACCCAAAATATATAATATCAGGGGA
GGTGTCAAAGCAATTTCAAAATTAGCTAAAATACTAAGCAGCCCAGCGCT
GATCTAAAGAtagaatttgttttaaaaaaatgtgtaccttAGTCCAAAGA
GAATTCCTATGTAAATCCTCAGATACAAATTCCGCTTCGAAACTAGGTCA
TTGAGGAAGCGAAgaaagaaataaagcaaatgaCTGAGAGCATGAAACAG
AAAGAAGAAACGCTCAAACAACAAATTACTCAACTTGAAAATGATTACAA
AGCAAAAGAAGACAAAATTAACAACGAAAAAGATTCCCTTCTAAAAGAGG
TAGTGGTTGTTTTTATCGTTGCTGCTGTTCTAgcatggaaatttttcaaa
cattgatTAACGAAATTAATACTGATTTTTttaagttatttatttttttg
tagatAGGTATGGGTTTTTGGATTGTAAGTAGTTTCGAGcacattgaaat
attttcacaaTTCAATCACTGAGCCAATTATTACGAAACCTATTAAGAAA
CTGAACCTATTCTGAGGTCTCTTCCAAAATCTCTTAAAAACGTTTCTACC
TTATGCATGAAACCTTTAGAAAGattactttttgacttttttaacccTCA
GAGGGACTTTAGAAGGTTATAATCAACCATCATTGTTCGCAAATACCCAG
AGCCcgtttttgcctaagtaacACCCCCAGGGTTGGTCTCTTCAGAAGAC
TCTTCAAATATTCTACTTTACCACAATTGAATGCACCCCATACAAATCAT
GCTTTGCCACTCGTTCTCCTGTTAATATTGTGCAGAATTCGGGTACTGGG
ACAGGGTTGTatgctttgaaatattttttctaatccatttagaaatcgaa
agtgaaaaaattcttgTAGAACTGTGCTTGCATGGATGACTGTTTTATTA
TTAAGTAATTTCCAATCTTAGAACACtattactttaaaaaaattcataaa
atatttctttcactCCAAACACATAACTTTAGTGACTATGAAAGGTGATT
TTTCAGATTACATTAAGACAAAAATTTACACGAAACACGCTTAGCTAGAT
ACCACNTTTCAGATTACATTAAGACAAAAATTTACATGAAACACGCTTAG
CTAGATACCACAATCCAATACATACACACGCACGCCCTCctaactttcat
tttcttcattttcaccaCAGCTAAATGAAGAACgagagaaagtgaaagtg
aacaACAGTGAAATCAAAGTGTTGAAGAACGGAATCGAAAAACTGATCAA
AGAGAAGACTGACGAAAAATCTTTCAGAATCAAAGTATGTTTTCAAAGAG
CTGACAACAAAGAACTGATAATTCTTGTCATTCGTGCCTTTTAGttgact
ctcgcttattcgagcACGTTAGCGAAAAATTTTTAATCGAATTGCAGagg
gattcgaattatagaaagtattctaCAAAGCTTTCCCTTGGTCGGGACAG
CTATTCAGTTCGAATTATTGAAAGATTTGAATGATAGAAGATCGAATTGG
TGAATGTTCATTTTGACTACAAAAAGCTACGTCCTTGACACGTTAGGGTG
TTGAACTCTTAAACAAGTCTTTTAATCTAATGGTTGGTGCAAAACCAACT
CTTCATAGCCATGACAACTAAAAGACATATCTCAGAACCATTCTATTTTA
CTCTTTCTACAGATAGCAGAGCGTTTAAAAATGATTATTGAAGAGAAAAA
TACTATGGAAGGTGCTTACAAACTCGACCTGCAACAAGTGTCACGCGATT
TTGAAGACCTCAAAAAACACTTCGTTCACGTTACAAGGTGACTAGCAAGC
GGtcttattatttaaaaattgtgTTCACATTCCTGGTCTCGCGTTTGAAG
TAAGGCAGGCAAAACTTAAGGGGGaaatttaaagaagatttttttttcac
tagTTTGCGGAAATGTGCGGTGGCCATGCCTCCTTCTCCTCCCTCATCGA
CGGGACCCACGATTCCAACAAACTATAATAAGTGCAACTTAAGCCCTTCT
TCAAAGAGGCAGGACTAATTTTTCGTCACCTTCAATCTTCTCAAATGTAA
ATGATTAAACAACAACTCAACATTCGAATGCTAACCCACGTATTTAGATT
AAATTCTACTTCTGCATTTGAGCAACTGGAAATGTTCCGAACTCATTCAA
AATCATTTCATTAATTACTTAGCGACAAAGcagaaatgtttcaaaaatta
agCGACGCTGTGTTCGAGAAATGCAAGAAACAACGCTGGGTACCTGACAT
TGAATCAGAAAATTGTACAAATTGTTGTGAAAAATTCTCTTTCACTCTCA
GGAGGGTATGTTTCTCAATTGGAAGTTAAGGTGacattatcgaataatag
aatatCGAAAAGAAATTTGACTTTGGCTTTTAACTTGATCAAAAATGAAG
CTTTGTCTAACATAACATCAAATGAGAGTGTCATATACATTATCTCCCAG
TAGAAGGCTTAGATCTCGTCAATCTCCTTATAACCACTCTTTTTACAACA
CATTGTTTGTAAAATTGtgtctaaaaattttttttccagcacCACTGTCG
AATGTGTGGTCACATCTTTTGTTTCAAATGTTCCGATCGATGGTTGCTTA
CTCCACACAGTAGGTAAGTCGAGAAGTAATGTTTTATGACCCTGTCCTCC
AGTGGAGTCCCTGATCACACCATCATGCCAAAAAAGTTCTAATCCACAGG
ATAacgctgaaaatattctttttttccCGCCATCATTCTTAGAGTCTCAA
TCCCATATCACGCTTTTTAAACTCATAAACTACGCCATCGCGCCAAAAGA
AATGCCCAAATCACATCGCTATGCAAACAACCGGGGTCTTCTGCAATCTA
AGTAAAAAAGTGTGAGTAAATAAAAGCTGTTCCTTTTCACCGATGGCTGT
CCATTTGCTCTCTTTACTTTTTGTCGATTGATCCGCGCTACTACAAGGAG
TATGATGCAAACTTaatcatttcatttttctttttctcttctgtTTAGCA
AGAGAGTTCGTGCTTGTGATGTCTGTGCGGACACGTACACAGAACAACAT
TTGGATGCTGAACCAGGGCGTGATATAGATATGACTGACGCCCCTCCACA
ACAAATGTATGTATTCTTCATTGCTTTGCTAGAAACAAGCTTATTATGCC
TAGATATAATGACATAggaataatcagatggtttgatgAAACAAAATGAT
TTTGGTGTTAAGAAATTTCATATATTTCAAATTACATTACAGTATCTTGA
GTTACTGATGGGGAATTTATGAAGGTGAAATTTGTCTAAATTCATAAAGG
ATTGCTTAAAAAATCTCTTAACCTTTCGCCTTTTGGCCTAAAAACCAACT
AACTTTCCCCTATCTATTGTGATTGTAGGTATAGAGAATTGAGAGGTGAA
GAAATCACAAAGTATGAAAAGGAGTACCAAGAGGACGAAGATGCAGAAGA
CGATGGTGGACCTGGTAATTCTTTTTTTCGATATTTCTACACCCCTAGCC
ACCAGGGGCGTTCAATCTAAGAGCCTAAACAGTGGGGATCAATCGAATTT
CTTTTggcaaaactttggaaaatctgaaaatcttttgccttttctttccc
tttttGACATAGGAAGATATGAAAGTGTTTTGCCTTAAAATGGACAAAGA
CTCTCAAGAAAAGAGACCTAAATTAAAAGGCCTAAATTTTTCCGCCTTCC
TCATGACAATGCCTGTGGCATCACCAAAGAGCCAAACTTCACCTCCTGAC
CAAAGATGTAATGTCATGCaagttttggtaattttcaCAAATCGAAAGTG
ATATTTATCGCATTGATCCAGACTCGATTGTAAAATTATATTATGCTCAT
GTTTTTTTCATGCTATAGGTGAAACTTCTCGTTTGCTGGAGAAAGGAAAA
TGAGAATAGATCAAACAGAAACGAATTAGATCAGATCTACGTAACCTTCC
TTCATCATCGTCCTCCAAAAAGAAGCTGATTTCGTCATAACTCTGTCCCa
tattacacccccttctcacagacccggtattcaaccagtggggataaaaa
taacagactgaaaATCGATGGGGGttgatattctcatatttttcatggct
gggaatttcaattcttttcttttcaagtcAATAAAATTCAGCAGGGATGG
GAAAAAATAGTaagtattttgcagtgaggattggtttaattgattatttt
cagcgaggACAAAGGCTGGAGGATGATTTTCCACTGCGGGGAccatattt
tggccaatttttccagtgggaaggatttccagtggggctgtgagaaGGGA
TACATATAGGGATATTACACATAAAAATGCATACAATTTTATTCCACATA
TTATATTAAAACGAAAAATATATTCTGGTAACGTATACCATGTTTTTAAc
gaattaaaattttttgattgctGTAAATAAGAATTTCCAATTTATTCTTA
GAattcatttctttattttctatcagaatttatactttttataacacaca
ttaatttctttaataaagAAACAAGCTAAGGCTAACGCAACATAAATTAT
ATCATTCCTTTTTCCCAGCGGTGTGTAAGCGAGCGTGTTACCCCAATGAC
AATGTCTATACTACTTTGAGACAACAAGTTTATAAataacaaaaacattc
aaacccaacaaaaatttataaaaatacaaaataaaaattattgttCATTT
AACCTATATTTCTTGTCTCTTTCGTTGCCATTTTAGAAATAGAACTTTAG
TCATCAATTCCGACTACTCTTTCCAATTGTATAACCTTCAAGTTGGAAAA
TCAATTTTGGGTTCTTTTGTCTAATGGAAGTCTTGATACTTCTCCGCCat
ttaatttcaattctttATCCATATTCCAGAATACAACAGTTCATTTCATA
GACTTGCTTCTTCTGAATTGTTCGAAGATCTGTCTTTTCTTTCTCTTCCC
ATCCTCCCAGACTTCTTGGTGAGATTTCTGAGCAAACAGAACTTCAAATT
CATCATCTCGACTACCAGTGGCTGTAGTGGTTACGATTGCTTTATGGTGA
TCAAAACCATTGGTGAACTGGTAATCTCTGGAAGATTGATGGCCACCAGA
GACTGCTCCTCCATAACTTACCACAGCATTTGATCCAGGGTATGTATTAT
AGGATGACTGGTACATCGAATTCCCTGCATATGCACCGTTTCGATGATTC
TGGTTGTTCCCAAATTGCCAGGGTTCAATATTGACCACATCCGAGGTTGT
ACCAACACACCTGTTAGCATACTGCTTTACCATCCGTTTCGCTTCCTCCT
TCTTCAACTCGATAAACTTAGACAACTCTTGAGACATTGTCCAATGGATC
TGTTCAGTATCGGTAGATATTGGATATACATGCCGTTTCTTCAGAATAGG
TTCTTCGAAGATGCATCGGTTCATATCATGCCAGAGTTGTTCAAATTCGA
TTCCTGTTTTACATCTTACCATTCGCATCATGAGGTTTTGGAACTCTTTG
GCAGATCTGATATGTTTGTGTTTTCTCTCAGCTGGTTGTAACACAGCGTA
CAGACAAACTAGGAATGTTAGCGTTGCCACTAACCCAGCAATGATGAATA
TAGTCACCGTTTGTAGTAATGCCAACAGAGTTGCAACAGCTCCAAAGATT
GCCATAGCTGACAGAaggattttattgattttgttcCAGTAGCGTGATGC
CCACATATGACTTTTGTATTTGGCTTCGGTCTTCTGGATGAAGGTTTTCC
ATTTCTTGGTCATCTCCTTGAGGACTTCTTGGCCAATCTTCTTGAGCTCA
ATATCTTTATCCGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042604XLOC_042604Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068258-exon-scaffold_482-1491911889:213114..213141TCONS_00068258-exon-scaffold_482-1491911889:213114..213141Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1510915933:213114..213141TCONS_00068258-exon-scaffold_482-1510915933:213114..213141Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1575043694:213114..213141TCONS_00068258-exon-scaffold_482-1575043694:213114..213141Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1491911889:213290..213331TCONS_00068258-exon-scaffold_482-1491911889:213290..213331Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1510915933:213290..213331TCONS_00068258-exon-scaffold_482-1510915933:213290..213331Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1575043694:213290..213331TCONS_00068258-exon-scaffold_482-1575043694:213290..213331Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1491911889:213924..214082TCONS_00068258-exon-scaffold_482-1491911889:213924..214082Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1510915933:213924..214082TCONS_00068258-exon-scaffold_482-1510915933:213924..214082Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1575043694:213924..214082TCONS_00068258-exon-scaffold_482-1575043694:213924..214082Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1491911889:214472..214705TCONS_00068258-exon-scaffold_482-1491911889:214472..214705Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1510915933:214472..214705TCONS_00068258-exon-scaffold_482-1510915933:214472..214705Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1575043694:214472..214705TCONS_00068258-exon-scaffold_482-1575043694:214472..214705Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1491911889:215210..215362TCONS_00068258-exon-scaffold_482-1491911889:215210..215362Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1510915933:215210..215362TCONS_00068258-exon-scaffold_482-1510915933:215210..215362Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1575043694:215210..215362TCONS_00068258-exon-scaffold_482-1575043694:215210..215362Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1491911889:216234..216347TCONS_00068258-exon-scaffold_482-1491911889:216234..216347Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1510915933:216234..216347TCONS_00068258-exon-scaffold_482-1510915933:216234..216347Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1575043694:216234..216347TCONS_00068258-exon-scaffold_482-1575043694:216234..216347Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1491911889:216726..216850TCONS_00068258-exon-scaffold_482-1491911889:216726..216850Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1510915933:216726..216850TCONS_00068258-exon-scaffold_482-1510915933:216726..216850Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1575043694:216726..216850TCONS_00068258-exon-scaffold_482-1575043694:216726..216850Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1491911889:217236..217368TCONS_00068258-exon-scaffold_482-1491911889:217236..217368Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1510915933:217236..217368TCONS_00068258-exon-scaffold_482-1510915933:217236..217368Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1575043694:217236..217368TCONS_00068258-exon-scaffold_482-1575043694:217236..217368Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1491911889:217603..217676TCONS_00068258-exon-scaffold_482-1491911889:217603..217676Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1510915933:217603..217676TCONS_00068258-exon-scaffold_482-1510915933:217603..217676Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1575043694:217603..217676TCONS_00068258-exon-scaffold_482-1575043694:217603..217676Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1491911889:218062..218169TCONS_00068258-exon-scaffold_482-1491911889:218062..218169Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1510915933:218062..218169TCONS_00068258-exon-scaffold_482-1510915933:218062..218169Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1575043694:218062..218169TCONS_00068258-exon-scaffold_482-1575043694:218062..218169Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1491911889:218442..218527TCONS_00068258-exon-scaffold_482-1491911889:218442..218527Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1510915933:218442..218527TCONS_00068258-exon-scaffold_482-1510915933:218442..218527Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1575043694:218442..218527TCONS_00068258-exon-scaffold_482-1575043694:218442..218527Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1491911889:218932..220878TCONS_00068258-exon-scaffold_482-1491911889:218932..220878Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1510915933:218932..220878TCONS_00068258-exon-scaffold_482-1510915933:218932..220878Clytia hemisphaericaexon
TCONS_00068258-exon-scaffold_482-1575043694:218932..220878TCONS_00068258-exon-scaffold_482-1575043694:218932..220878Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_482supercontigscaffold_482:213114..220878 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0.416865	0	0	0	1.35048	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
[Close]
BLAST of TCONS_00068258 vs. Swiss-Prot (Human)
Match: EEA1 (Early endosome antigen 1 OS=Homo sapiens GN=EEA1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 4.425e-18
Identity = 32/58 (55.17%), Postives = 39/58 (67.24%), Query Frame = 2 
Query:  917 RWVPDIESENCTNCCEKFSFTLRRHHCRMCGHIFCFKCSDRWLLTPHSSKRVRACDVC 1090
            +W  D E +NC  C + FS T+RRHHCR CG+IFC +CS +  LTP S K VR CD C
Sbjct: 1348 KWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDAC 1405
The following BLAST results are available for this feature:
BLAST of TCONS_00068258 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EEA14.425e-1855.17Early endosome antigen 1 OS=Homo sapiens GN=EEA1 P... [more]
back to top