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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068188 ID=TCONS_00068188|Name=TCONS_00068188|organism=Clytia hemisphaerica|type=transcript|length=1341bp
cacaaatttacCGACACCCCTGAGAACGCTACTGGAATTTTACAGGAGAT
CACAAGAGATAATACCAAATTGATTCACTCAATAGAGCGTAGACGGTCTA
AGCGAATCGTTATCCCTTATTATTAATCGTCAAAGTGATCTTAATTCCCC
ATCAAAAGTTTTCACAAACTTCATCAAATTTGAAGGCGGGAAGGAATTAC
ATCGATTAATGTTCATAGATCACGTTTAGACTACGGATTACCCATTTCCT
CATATAGAAAAAGTACCTCCTCACTTCCTCATAAGTATTGCCTTATGTCT
TCCTTGTGCCAATGAGTAAAATCGTTGCTCTACCGGCATTTAAACCTTCT
GTACTATAACCTTACACTATAAACAACGATGTTCAACACTGAACCCTTTA
CCATCGCATTCACTACAATACTTTATCATCGACCATCATGAGACTAACAA
AACATACTTGTGATTCCACCCGAAACACAGTAATGACTACTTTCAGCAAG
GAATGAGGTGAAGTGATTGAAAAATAGAGATTCACGTAGGATCAACATTG
ACATAATTACCAGATGAAATTCACATTGAGAAGGATTTACACATTCATTA
AGCCAATAAACACGCGTCATACTTTACCTTGGGATTGTTACTTTCTCTTG
CTTACCTTTCGAGACGTTCAAAGGTGGTTGTTTTGACGTTCTTTGTTCCA
TATTACCTCAAAGAAAGGTATCACATTTCGAAATCTTATTTCAATGACTT
CAGAATACCCATTTCGATAAATATTTACCGTCTTGTCATTTGAAAACTGT
TTTGAAAATGCTAACTATGTCAACAAAGAATTACTCTGTAACTACAGTTT
TGACTAACattttaaccaatttttttattcaaaatgatcAGTTTACTGAA
TATTGAACATGTTTTGTTAAGAAAGATCATTGAAAGTATGTAACTTTGCA
ATTGCAACATTTTTCTCTCGATATCTATAAATGACAAAATATTCTAAATT
TTACAAGAAAACTAAATATGATGATATATTGAGATGAAGCAGGATATACG
ACTTGGGATGTATCAGAGCATCCTACCCATCTATATGCTTCAAGGagtca
tgaatatcataaaaCAGAAGTGAAGCTACATataatcatagtataagaaa
gccgcggctggaatgataacatctgaatttctgttgttctatctctgtcg
tatttgatgactatttgtttatcaagaaatcagtaatgtagcatctttaa
tggtaaattttattagtttgtcgttaatacttacttctcagtgcgtctta
gacattaatgatatgcccttgataatacacttgtaTTATAA Run BLAST on NCBI transcript from alignment at scaffold_48:183353..184693 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068188 ID=TCONS_00068188|Name=TCONS_00068188|organism=Clytia hemisphaerica|type=transcript|length=1341bp|location=Sequence derived from alignment at scaffold_48:183353..184693 (Clytia hemisphaerica)
TTATAAtacaagtgtattatcaagggcatatcattaatgtctaagacgca
ctgagaagtaagtattaacgacaaactaataaaatttaccattaaagatg
ctacattactgatttcttgataaacaaatagtcatcaaatacgacagaga
tagaacaacagaaattcagatgttatcattccagccgcggctttcttata
ctatgattatATGTAGCTTCACTTCTGttttatgatattcatgactCCTT
GAAGCATATAGATGGGTAGGATGCTCTGATACATCCCAAGTCGTATATCC
TGCTTCATCTCAATATATCATCATATTTAGTTTTCTTGTAAAATTTAGAA
TATTTTGTCATTTATAGATATCGAGAGAAAAATGTTGCAATTGCAAAGTT
ACATACTTTCAATGATCTTTCTTAACAAAACATGTTCAATATTCAGTAAA
CTgatcattttgaataaaaaaattggttaaaatGTTAGTCAAAACTGTAG
TTACAGAGTAATTCTTTGTTGACATAGTTAGCATTTTCAAAACAGTTTTC
AAATGACAAGACGGTAAATATTTATCGAAATGGGTATTCTGAAGTCATTG
AAATAAGATTTCGAAATGTGATACCTTTCTTTGAGGTAATATGGAACAAA
GAACGTCAAAACAACCACCTTTGAACGTCTCGAAAGGTAAGCAAGAGAAA
GTAACAATCCCAAGGTAAAGTATGACGCGTGTTTATTGGCTTAATGAATG
TGTAAATCCTTCTCAATGTGAATTTCATCTGGTAATTATGTCAATGTTGA
TCCTACGTGAATCTCTATTTTTCAATCACTTCACCTCATTCCTTGCTGAA
AGTAGTCATTACTGTGTTTCGGGTGGAATCACAAGTATGTTTTGTTAGTC
TCATGATGGTCGATGATAAAGTATTGTAGTGAATGCGATGGTAAAGGGTT
CAGTGTTGAACATCGTTGTTTATAGTGTAAGGTTATAGTACAGAAGGTTT
AAATGCCGGTAGAGCAACGATTTTACTCATTGGCACAAGGAAGACATAAG
GCAATACTTATGAGGAAGTGAGGAGGTACTTTTTCTATATGAGGAAATGG
GTAATCCGTAGTCTAAACGTGATCTATGAACATTAATCGATGTAATTCCT
TCCCGCCTTCAAATTTGATGAAGTTTGTGAAAACTTTTGATGGGGAATTA
AGATCACTTTGACGATTAATAATAAGGGATAACGATTCGCTTAGACCGTC
TACGCTCTATTGAGTGAATCAATTTGGTATTATCTCTTGTGATCTCCTGT
AAAATTCCAGTAGCGTTCTCAGGGGTGTCGgtaaatttgtg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068188-exon-scaffold_48-1491911889:183353..184693 | TCONS_00068188-exon-scaffold_48-1491911889:183353..184693 | Clytia hemisphaerica | exon |
| TCONS_00068188-exon-scaffold_48-1510915933:183353..184693 | TCONS_00068188-exon-scaffold_48-1510915933:183353..184693 | Clytia hemisphaerica | exon |
| TCONS_00068188-exon-scaffold_48-1575043694:183353..184693 | TCONS_00068188-exon-scaffold_48-1575043694:183353..184693 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_48 | supercontig | scaffold_48:183353..184693 . |
Blast
The following BLAST results are available for this feature:
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