TCONS_00068162 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068162
Unique NameTCONS_00068162
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3088

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068162 ID=TCONS_00068162|Name=TCONS_00068162|organism=Clytia hemisphaerica|type=transcript|length=3088bp
TCTTCGCATCTTCTGCTATAAATTGGAATGATTATCAAATTATTTATCAA
GTAAACAACTTTTATTTATCAAGTAAACAACTAGAGGAAGattaacaaaa
acaagaaacaaaGTTCTATCCAAGGAAGCCTACCAAGGTGAAAGGTTTGG
CAAAGATGGATAATCATATTATCCTACTATCGTTTTTGATACTATGCTGT
TACGCTTGTTATGGCAACacacaatacattgccagacatGATATGACGCC
ATCGAGTTACCAGCAAGAGTTTAGCAAATTGCACCATAAAGGATATCGGT
TGAAGCAAGTCAGTGGTTACTCCACATCACAAGGGTACCCAAGGTATGCC
GCCATCTGGGTGAAAAACAGCCGCCCCAACATCGCATACAAGGCGAAACA
TGGAATGAGCAGCAAGGATTACCAGGAAGAGTTTCAAAAGAACCGTCTTC
TCTATCGTCTGGTCATGATCGAAGGATATCTTGTGAAAAAAGACAACAAA
TGGGAAGCTCGCTATGCAGCTATTTGGCATAAGAAAACATCGCTAGGAGC
AAACCAACCAGCTTACAAAACACACCATAAAATGTCATCAAGGACTTACC
AGACCCTATTCAACAAATACAAAACGCAAGGCTATCGATTGACTTGGGTT
AGTGCGTATACTATTGGCACGAAAAGCGACTACTATGCAGCAATATGGGA
AAAGAGATCAGGCCCTACCATGATCACTCGCCATCGAATGACCAGTTCTC
AATACCAATCTTACTTCAACGTATACACTCGTAGAGGATATCATTTGACA
CTGGTGGATGGGTATCAGTTGGACGGAAGTGAGAGATATGTTGCCATATG
GGAACGGATAGGTGGCGCAAGATCTGCTCGCCATGGTTTGATAGAGCCCA
ACTATCAAGCAGCTTTCGATAACCAGAAGTACCGTGGTTATAACCTCAAT
ATTGTCTCTGGATATTTAGTAGGATCGACCAAACGATACGCTGGTATTTG
GATCAACAGTGGAATCTGGACCACTCAAAACCTTAATCATATTGATAGCA
CAGTGAAAGACTTCCTCAAAGAAAACCAAATTCCTGGAGGTTCTTTAGCC
ATTACACGGCATGGAAAACTGGTCTTTGCTCAAGGCTATGGAAATGTGAA
TACCGGTTTAGATGCTTCACCAAGTCACCTTTGGAGGATTGCCAGTATTT
CAAAACCAATCACTGGCGTGGCCATCATGAAGCTGATTGAAGACGGTCAA
ATCAAGTTGAGTGACAGAGTATTTGGTCCAAACGGCATCCTTGGAAATGA
GTACAACAATGGAGAGTATAGCGCTAGAGAGCTCTTCATCACCGTACTTC
ATTTACTGGAGCATACAGCAGGAGGGACCACGTGGAATAACAAAGGCGGT
GATGGAAGCTCTGATCCAATGTTTCAACATACCACCTTCTCTCACAAACA
GCTCATTGATTGGGTGCTCAAGACTCGTGAACCGAGTCACTGGCCTGGTT
CAATCTACAGTTATTCCAATTTTGGTTATTGCATCTTAGGACGTATCatt
gaaaaagtaaccggtgTCACATACAGTGAATACGTTCGGACGAAGATCAT
GGAGCCTGCAAAATCGGAAAAGATGCACATCGCTGGAAACACCTACGCCC
AAAAACGACCGATGGAAACACGGTATTATTCAGGTGACGGCAATCCGTAC
ACCATGAACGTGCACCGAATGGATTCACACGGCGGATGGATTACAAACCC
GATCGACCTTCAGCGGTTCATGGTCCACTATGACGGTTTGTCAACAGTTG
ATGACTTGCTCAAGGGAAACACCATTCTGAACATGGTTAAACCGTCAGTT
CGAAATGCAGGCAAATGCAAAGGTGGATGGTCCATCAATGCGTTGAAGGA
TTGGTGGTGGCACGGAGGCTCCTTACCTGGCACCATGACTGTTCTGGTGA
GATTGGATGAGGTTCGTGGGTTGACTTGGTCCTTCTTTGTTAACAAAAGG
GGGAGCGGTGAAGTGGATCCATTGATGTGGAAAGTTGTCAATGGAATCAC
TGCTTGGCCAAGTGCGGGTGTTGacttattttaaaatattcatacCAAGT
ACAGATCTAAAGTGTATTCAAACATTAAAACAGGCGATTTGAAGTGAGGT
TAAATAGATACCTCAAATGTACGTACATTTACAAGTTGCTCAAATCTATA
CTTGTCACAAGGACTTTCACTGTAAATCTCTTCAGGGTAAAGGGACATCT
GTATTTTAATGTTATGTACTAAGTAATTTTAagtatctttttattcattc
aacAATTTTGATTCTATTTTGCCTACTCTCggcgggtacctaatagccgg
gggggggggctgctAAATAATTTTTCgacttattccaaacccccggcTAT
TAAGGCTAGCGTTGTCAGCGTCAAAACAAAAGACTGGTATCAATAGTGTT
AAAAAGTCGCATTTATTTTTAACCTTCCATTATATCTCTGGATAGGACGG
TCTCTAACTGCACTTCATTGACGAGAACACATCCACTGAGTTCTAGGAAT
CATGTGGTACCAATTGAACTATCTTTATAAGCAGATGGTATGTACAATGC
GTTTGTAGAAGAATAAAAGatgcattttgatttttttgggggattatttt
attatttatatataaaaaagttgtttgaaaatatataaaacatCCAGGGT
GAGAAATTATTTACAAATGTATACGTATTGGAGATGACGTCACTACCAGA
GTGGATCATCGTTGGTGATAATGCTGCAGACCTTTATGAGAAGAAACCAT
ATTCCGATACAAAAGGTGACGAGGGAGATGTCGTATGCGCTCCATGGTCT
TTCGGTGTCGCATTGGTCGAAAATAATGTCCACTGATGTTTTTTCTTGGC
TTTTTAGTTTACCAGTGCTatgaaagaaatgttttttacaaaataaattg
TTACCGTAGATGTTTGTACTTACTTGTTATCAAACGAACAATTATTTGAa
tatgaaagttttttaaatttaaactgAAAGTTAATTTGAGTTGCATGTTG
AATTGTGAAATTCAACAACACTCCAAAATTATCGGATT
Run BLAST on NCBI

protein sequence of TCONS_00068162-protein

>TCONS_00068162-protein ID=TCONS_00068162-protein|Name=TCONS_00068162-protein|organism=Clytia hemisphaerica|type=polypeptide|length=642bp
MDNHIILLSFLILCCYACYGNTQYIARHDMTPSSYQQEFSKLHHKGYRLK
QVSGYSTSQGYPRYAAIWVKNSRPNIAYKAKHGMSSKDYQEEFQKNRLLY
RLVMIEGYLVKKDNKWEARYAAIWHKKTSLGANQPAYKTHHKMSSRTYQT
LFNKYKTQGYRLTWVSAYTIGTKSDYYAAIWEKRSGPTMITRHRMTSSQY
QSYFNVYTRRGYHLTLVDGYQLDGSERYVAIWERIGGARSARHGLIEPNY
QAAFDNQKYRGYNLNIVSGYLVGSTKRYAGIWINSGIWTTQNLNHIDSTV
KDFLKENQIPGGSLAITRHGKLVFAQGYGNVNTGLDASPSHLWRIASISK
PITGVAIMKLIEDGQIKLSDRVFGPNGILGNEYNNGEYSARELFITVLHL
LEHTAGGTTWNNKGGDGSSDPMFQHTTFSHKQLIDWVLKTREPSHWPGSI
YSYSNFGYCILGRIIEKVTGVTYSEYVRTKIMEPAKSEKMHIAGNTYAQK
RPMETRYYSGDGNPYTMNVHRMDSHGGWITNPIDLQRFMVHYDGLSTVDD
LLKGNTILNMVKPSVRNAGKCKGGWSINALKDWWWHGGSLPGTMTVLVRL
DEVRGLTWSFFVNKRGSGEVDPLMWKVVNGITAWPSAGVDLF
Run BLAST on NCBI

transcript from alignment at scaffold_48:161639..165543-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068162 ID=TCONS_00068162|Name=TCONS_00068162|organism=Clytia hemisphaerica|type=transcript|length=3905bp|location=Sequence derived from alignment at scaffold_48:161639..165543- (Clytia hemisphaerica)
TCTTCGCATCTTCTGCTATAAATTGGAATGATTATCAAATTATTTATCAA
GTAAACAACTTTTATTTATCAAGTAAACAACTAGAGGAAGATTAACAAAA
ACAAGAAACAAAGTTCTATCCAAGGTAAGGTAGGATTCTTTGTAGAAATA
TAAATTGAGAATACTTATACGTGATTTTTCTCAGTTGTGGTCTATGCTCG
CTTACCCGAGCTACACTAATGAGTCTTGGGTAGAAACAGAATAATAGAAC
GCGTGTTTGCGGATAGATACGTAAATATGACGTATGAGTATCTTTTAACC
TACTGGTTCTTTAGCTGGATTATTTTGTACTCTTTTCGATAATTTCTTTT
TCTCTTTGGTTGGTGAAATCTCAATATCTTTCTTTTCATAGGAAGCCTAC
CAAGGTGAAAGGTTTGGCAAAGATGGATAATCATATTATCCTACTATCGT
TTTTGATACTATGCTGTTACGCTTGTTATGGCAACACACAATACATTGCC
AGACATGATATGACGCCATCGAGTTACCAGCAAGAGTTTAGCAAATTGCA
CCATAAAGGATATCGGTTGAAGCAAGTCAGTGGTTACTCCACATCACAAG
GGTACCCAAGGTATGCCGCCATCTGGGTGAAAAACAGCCGCCCCAACATC
GCATACAAGGCGAAACATGGAATGAGCAGCAAGGATTACCAGGAAGAGTT
TCAAAAGAACCGTCTTCTCTATCGTCTGGTCATGATCGAAGGATATCTTG
TGAAAAAAGACAACAAATGGGAAGCTCGCTATGCAGCTATTTGGCATAAG
AAAACATCGCTAGGAGCAAACCAACCAGCTTACAAAACACACCATAAAAT
GTCATCAAGGACTTACCAGACCCTATTCAACAAATACAAAACGCAAGGCT
ATCGATTGACTTGGGTTAGTGCGTATACTATTGGCACGAAAAGCGACTAC
TATGCAGCAATATGGGAAAAGAGATCAGGCCCTACCATGATCACTCGCCA
TCGAATGACCAGTTCTCAATACCAATCTTACTTCAACGTATACACTCGTA
GAGGATATCATTTGACACTGGTGGATGGGTATCAGTTGGACGGAAGTGAG
AGATATGTTGCCATATGGGAACGGATAGGTGGCGCAAGATCTGCTCGCCA
TGGTTTGATAGAGCCCAACTATCAAGCAGCTTTCGATAACCAGAAGTACC
GTGGTTATAACCTCAATATTGTCTCTGGATATTTAGTAGGATCGACCAAA
CGATACGCTGGTATTTGGATCAACAGTGGAATCTGGACCACTCAAAACCT
TAATCATATTGATAGCACAGTGAAAGACTTCCTCAAAGAAAACCAAATTC
CTGGAGGTTCTTTAGCCATTACACGGCATGGAAAACTGGTCTTTGCTCAA
GGCTATGGAAATGTGAATACCGGTTTAGATGCTTCACCAAGTCACCTTTG
GAGGATTGCCAGTATTTCAAAACCAATCACTGGCGTGGCCATCATGAAGC
TGATTGAAGACGGTAAGCACCTAGATTTCTTCAGAATGACAAATTGTTCG
TCATTTGTTTACATCCTTTAAAGTAAGGTTCGAACTAGAGGTTATGCTGT
AAAATGAGAACGATATGAATAGAAACGATATGAAAAGGAATTTGATGAAG
ACATAAGTATCTTGTTTGCACCATGCTTACGGTATAAAACAAAGTTCATA
ACGTCATTTTTGCAATTAAATTATCAATTAATTTTTAAGGAATTTGATCA
AAAGGCAATTTGTAAAGGCAATTCTTTGTTAAAAGTGTAAAGGAACCTGA
AACGTAACTTTCATGCTCAAATACCAAAATCAATTTTTTGACTACGGTTA
AGAGCCCTTAAGAAATTGTCAGCCGAGAAATTGTCAGCCACAATTAGAGA
TGAAACGCCCCTATGGGCGCATGGGACGTGGTGCTCCTATGTCCTTATTT
GCTTTATACAGTCAAAAATAAGCGTGGCATAACGTACGACGAGTACGTCC
TCAGGAATGGCCGAATATCTGCTAATTCACTCAACTCTGATAAACTCTCT
TTTATCCAACAGGTCAAATCAAGTTGAGTGACAGAGTATTTGGTCCAAAC
GGCATCCTTGGAAATGAGTACAACAATGGAGAGTATAGCGCTAGAGAGCT
CTTCATCACCGTACTTCATTTACTGGAGCATACAGCAGGAGGGACCACGT
GGAATAACAAAGGCGGTGATGGAAGCTCTGATCCAATGTTTCAACATACC
ACCTTCTCTCACAAACAGCTCATTGATTGGGTGCTCAAGACTCGTGAACC
GAGTCACTGGCCTGGTTCAATCTACAGTTATTCCAATTTTGGTTATTGCA
TCTTAGGACGTATCATTGAAAAAGTAACCGGTGTCACATACAGTGAATAC
GTTCGGACGAAGATCATGGAGCCTGCAAAATCGGAAAAGATGCACATCGC
TGGAAACACCTACGCCCAAAAACGACCGATGGAAACACGGTATTATTCAG
GTGACGGCAATCCGTACACCATGAACGTGCACCGAATGGATTCACACGGC
GGATGGATTACAAACCCGATCGACCTTCAGCGGTTCATGGTCCACTATGA
CGGTTTGTCAACAGTTGATGACTTGCTCAAGGGAAACACCATTCTGAACA
TGGTTAAACCGTCAGTTCGAAATGCAGGCAAATGCAAAGGTGGATGGTCC
ATCAATGCGTTGAAGGATTGGTGGTGGCACGGAGGCTCCTTACCTGGCAC
CATGACTGTTCTGGTGAGATTGGATGAGGTTCGTGGGTTGACTTGGTCCT
TCTTTGTTAACAAAAGGGGGAGCGGTGAAGTGGATCCATTGATGTGGAAA
GTTGTCAATGGAATCACTGCTTGGCCAAGTGCGGGTGTTGACTTATTTTA
AAATATTCATACCAAGTACAGATCTAAAGTGTATTCAAACATTAAAACAG
GCGATTTGAAGTGAGGTTAAATAGATACCTCAAATGTACGTACATTTACA
AGTTGCTCAAATCTATACTTGTCACAAGGACTTTCACTGTAAATCTCTTC
AGGGTAAAGGGACATCTGTATTTTAATGTTATGTACTAAGTAATTTTAAG
TATCTTTTTATTCATTCAACAATTTTGATTCTATTTTGCCTACTCTCGGC
GGGTACCTAATAGCCGGGGGGGGGGGCTGCTAAATAATTTTTCGACTTAT
TCCAAACCCCCGGCTATTAAGGCTAGCGTTGTCAGCGTCAAAACAAAAGA
CTGGTATCAATAGTGTTAAAAAGTCGCATTTATTTTTAACCTTCCATTAT
ATCTCTGGATAGGACGGTCTCTAACTGCACTTCATTGACGAGAACACATC
CACTGAGTTCTAGGAATCATGTGGTACCAATTGAACTATCTTTATAAGCA
GATGGTATGTACAATGCGTTTGTAGAAGAATAAAAGATGCATTTTGATTT
TTTTGGGGGATTATTTTATTATTTATATATAAAAAAGTTGTTTGAAAATA
TATAAAACATCCAGGGTGAGAAATTATTTACAAATGTATACGTATTGGAG
ATGACGTCACTACCAGAGTGGATCATCGTTGGTGATAATGCTGCAGACCT
TTATGAGAAGAAACCATATTCCGATACAAAAGGTGACGAGGGAGATGTCG
TATGCGCTCCATGGTCTTTCGGTGTCGCATTGGTCGAAAATAATGTCCAC
TGATGTTTTTTCTTGGCTTTTTAGTTTACCAGTGCTATGAAAGAAATGTT
TTTTACAAAATAAATTGTTACCGTAGATGTTTGTACTTACTTGTTATCAA
ACGAACAATTATTTGAATATGAAAGTTTTTTAAATTTAAACTGAAAGTTA
ATTTGAGTTGCATGTTGAATTGTGAAATTCAACAACACTCCAAAATTATC
GGATT

Coding sequence (CDS) from alignment at scaffold_48:161639..165543-

>TCONS_00068162 ID=TCONS_00068162|Name=TCONS_00068162|organism=Clytia hemisphaerica|type=CDS|length=3858bp|location=Sequence derived from alignment at scaffold_48:161639..165543- (Clytia hemisphaerica)
GTCAAATCAAGTTGAGTGACAGAGTATTTGGTCCAAACGGCATCCTTGGA
AATGAGTACAACAATGGAGAGTATAGCGCTAGAGAGCTCTTCATCACCGT
ACTTCATTTACTGGAGCATACAGCAGGAGGGACCACGTGGAATAACAAAG
GCGGTGATGGAAGCTCTGATCCAATGTTTCAACATACCACCTTCTCTCAC
AAACAGCTCATTGATTGGGTGCTCAAGACTCGTGAACCGAGTCACTGGCC
TGGTTCAATCTACAGTTATTCCAATTTTGGTTATTGCATCTTAGGACGTA
TCATTGAAAAAGTAACCGGTGTCACATACAGTGAATACGTTCGGACGAAG
ATCATGGAGCCTGCAAAATCGGAAAAGATGCACATCGCTGGAAACACCTA
CGCCCAAAAACGACCGATGGAAACACGGTATTATTCAGGTGACGGCAATC
CGTACACCATGAACGTGCACCGAATGGATTCACACGGCGGATGGATTACA
AACCCGATCGACCTTCAGCGGTTCATGGTCCACTATGACGGTTTGTCAAC
AGTTGATGACTTGCTCAAGGGAAACACCATTCTGAACATGGTTAAACCGT
CAGTTCGAAATGCAGGCAAATGCAAAGGTGGATGGTCCATCAATGCGTTG
AAGGATTGGTGGTGGCACGGAGGCTCCTTACCTGGCACCATGACTGTTCT
GGTGAGATTGGATGAGGTTCGTGGGTTGACTTGGTCCTTCTTTGTTAACA
AAAGGGGGAGCGGTGAAGTGGATCCATTGATGTGGAAAGTTGTCAATGGA
ATCACTGCTTGGCCAAGTGCGGGTGTTGACTTATTTTAAATGGATAATCA
TATTATCCTACTATCGTTTTTGATACTATGCTGTTACGCTTGTTATGGCA
ACACACAATACATTGCCAGACATGATATGACGCCATCGAGTTACCAGCAA
GAGTTTAGCAAATTGCACCATAAAGGATATCGGTTGAAGCAAGTCAGTGG
TTACTCCACATCACAAGGGTACCCAAGGTATGCCGCCATCTGGGTGAAAA
ACAGCCGCCCCAACATCGCATACAAGGCGAAACATGGAATGAGCAGCAAG
GATTACCAGGAAGAGTTTCAAAAGAACCGTCTTCTCTATCGTCTGGTCAT
GATCGAAGGATATCTTGTGAAAAAAGACAACAAATGGGAAGCTCGCTATG
CAGCTATTTGGCATAAGAAAACATCGCTAGGAGCAAACCAACCAGCTTAC
AAAACACACCATAAAATGTCATCAAGGACTTACCAGACCCTATTCAACAA
ATACAAAACGCAAGGCTATCGATTGACTTGGGTTAGTGCGTATACTATTG
GCACGAAAAGCGACTACTATGCAGCAATATGGGAAAAGAGATCAGGCCCT
ACCATGATCACTCGCCATCGAATGACCAGTTCTCAATACCAATCTTACTT
CAACGTATACACTCGTAGAGGATATCATTTGACACTGGTGGATGGGTATC
AGTTGGACGGAAGTGAGAGATATGTTGCCATATGGGAACGGATAGGTGGC
GCAAGATCTGCTCGCCATGGTTTGATAGAGCCCAACTATCAAGCAGCTTT
CGATAACCAGAAGTACCGTGGTTATAACCTCAATATTGTCTCTGGATATT
TAGTAGGATCGACCAAACGATACGCTGGTATTTGGATCAACAGTGGAATC
TGGACCACTCAAAACCTTAATCATATTGATAGCACAGTGAAAGACTTCCT
CAAAGAAAACCAAATTCCTGGAGGTTCTTTAGCCATTACACGGCATGGAA
AACTGGTCTTTGCTCAAGGCTATGGAAATGTGAATACCGGTTTAGATGCT
TCACCAAGTCACCTTTGGAGGATTGCCAGTATTTCAAAACCAATCACTGG
CGTGGCCATCATGAAGCTGATTGAAGACGGTCAAATCAAGTTGAGTGACA
GAGTATTTGGTCCAAACGGCATCCTTGGAAATGAGTACAACAATGGAGAG
TATAGCGCTAGAGAGCTCTTCATCACCGTACTTCATTTACTGGAGCATAC
AGCAGGAGGGACCACGTGGAATAACAAAGGCGGTGATGGAAGCTCTGATC
CAATGTTTCAACATACCACCTTCTCTCACAAACAGCTCATTGATTGGGTG
CTCAAGACTCGTGAACCGAGTCACTGGCCTGGTTCAATCTACAGTTATTC
CAATTTTGGTTATTGCATCTTAGGACGTATCATTGAAAAAGTAACCGGTG
TCACATACAGTGAATACGTTCGGACGAAGATCATGGAGCCTGCAAAATCG
GAAAAGATGCACATCGCTGGAAACACCTACGCCCAAAAACGACCGATGGA
AACACGGTATTATTCAGGTGACGGCAATCCGTACACCATGAACGTGCACC
GAATGGATTCACACGGCGGATGGATTACAAACCCGATCGACCTTCAGCGG
TTCATGGTCCACTATGACGGTTTGTCAACAGTTGATGACTTGCTCAAGGG
AAACACCATTCTGAACATGGTTAAACCGTCAGTTCGAAATGCAGGCAAAT
GCAAAGGTGGATGGTCCATCAATGCGTTGAAGGATTGGTGGTGGCACGGA
GGCTCCTTACCTGGCACCATGACTGTTCTGGTGAGATTGGATGAGGTTCG
TGGGTTGACTTGGTCCTTCTTTGTTAACAAAAGGGGGAGCGGTGAAGTGG
ATCCATTGATGTGGAAAGTTGTCAATGGAATCACTGCTTGGCCAAGTGCG
GGTGTTGACTTATTTTAAATGGATAATCATATTATCCTACTATCGTTTTT
GATACTATGCTGTTACGCTTGTTATGGCAACACACAATACATTGCCAGAC
ATGATATGACGCCATCGAGTTACCAGCAAGAGTTTAGCAAATTGCACCAT
AAAGGATATCGGTTGAAGCAAGTCAGTGGTTACTCCACATCACAAGGGTA
CCCAAGGTATGCCGCCATCTGGGTGAAAAACAGCCGCCCCAACATCGCAT
ACAAGGCGAAACATGGAATGAGCAGCAAGGATTACCAGGAAGAGTTTCAA
AAGAACCGTCTTCTCTATCGTCTGGTCATGATCGAAGGATATCTTGTGAA
AAAAGACAACAAATGGGAAGCTCGCTATGCAGCTATTTGGCATAAGAAAA
CATCGCTAGGAGCAAACCAACCAGCTTACAAAACACACCATAAAATGTCA
TCAAGGACTTACCAGACCCTATTCAACAAATACAAAACGCAAGGCTATCG
ATTGACTTGGGTTAGTGCGTATACTATTGGCACGAAAAGCGACTACTATG
CAGCAATATGGGAAAAGAGATCAGGCCCTACCATGATCACTCGCCATCGA
ATGACCAGTTCTCAATACCAATCTTACTTCAACGTATACACTCGTAGAGG
ATATCATTTGACACTGGTGGATGGGTATCAGTTGGACGGAAGTGAGAGAT
ATGTTGCCATATGGGAACGGATAGGTGGCGCAAGATCTGCTCGCCATGGT
TTGATAGAGCCCAACTATCAAGCAGCTTTCGATAACCAGAAGTACCGTGG
TTATAACCTCAATATTGTCTCTGGATATTTAGTAGGATCGACCAAACGAT
ACGCTGGTATTTGGATCAACAGTGGAATCTGGACCACTCAAAACCTTAAT
CATATTGATAGCACAGTGAAAGACTTCCTCAAAGAAAACCAAATTCCTGG
AGGTTCTTTAGCCATTACACGGCATGGAAAACTGGTCTTTGCTCAAGGCT
ATGGAAATGTGAATACCGGTTTAGATGCTTCACCAAGTCACCTTTGGAGG
ATTGCCAGTATTTCAAAACCAATCACTGGCGTGGCCATCATGAAGCTGAT
TGAAGACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042543XLOC_042543Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068162-proteinTCONS_00068162-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068162-exon-scaffold_48-1575043694:165420..165543TCONS_00068162-exon-scaffold_48-1575043694:165420..165543Clytia hemisphaericaexon
TCONS_00068162-exon-scaffold_48-1575043694:164032..165152TCONS_00068162-exon-scaffold_48-1575043694:164032..165152Clytia hemisphaericaexon
TCONS_00068162-exon-scaffold_48-1575043694:161639..163481TCONS_00068162-exon-scaffold_48-1575043694:161639..163481Clytia hemisphaericaexon
TCONS_00068162-exon-scaffold_48-1510915933:165420..165543TCONS_00068162-exon-scaffold_48-1510915933:165420..165543Clytia hemisphaericaexon
TCONS_00068162-exon-scaffold_48-1510915933:164032..165152TCONS_00068162-exon-scaffold_48-1510915933:164032..165152Clytia hemisphaericaexon
TCONS_00068162-exon-scaffold_48-1510915933:161639..163481TCONS_00068162-exon-scaffold_48-1510915933:161639..163481Clytia hemisphaericaexon
TCONS_00068162-exon-scaffold_48-1491911889:165420..165543TCONS_00068162-exon-scaffold_48-1491911889:165420..165543Clytia hemisphaericaexon
TCONS_00068162-exon-scaffold_48-1491911889:164032..165152TCONS_00068162-exon-scaffold_48-1491911889:164032..165152Clytia hemisphaericaexon
TCONS_00068162-exon-scaffold_48-1491911889:161639..163481TCONS_00068162-exon-scaffold_48-1491911889:161639..163481Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_48supercontigscaffold_48:161639..165543 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0120168	0.0279053	0	0.132945	0.0919233	0.237646	0.207649	0.384219	0.141489	0.948844	0.812494	49.608	41.0411	34.651	22.6104	8.51993	18.8592	9.77227	8.07386	0.0357436	0.0871723	0	0.0128455	0.238151	0.283392	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001466Beta-lactam-related
IPR012338Beta-lactam/transpept-like
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068162 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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