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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068070 ID=TCONS_00068070|Name=TCONS_00068070|organism=Clytia hemisphaerica|type=transcript|length=1084bp
GTCAAATACAAGATATGTCCTTTGAAATCCTCAGTTTCACTCAGCCGTTT
TGCCTTCTCTTTCAGGATCGTTGTTTTTCCGCATCCATAACCAGATGAAA
CTATTACTTTGGAATATTTGGGATTATTATTATCACTAAGTACTGGTAAT
TGTTGTTTGTTATAAAACAGAATCCTTTCGGCGGGTATCTCTTCGATTAA
ATTACTAATACGTTCTACCCAGTTGGAACCAAGAACTGCTGTTCCGATAT
GGAGGATGAACACCATAATTTTCAATACATCCTTCATGTCTGTCAAAACA
TTGTCTGCGGTTGAAAAGCTGTCTGGGTATCTGCCACAAATGCTAGATAA
CCAACCGTCAACATCTGTATCCTTACTATTACTAATGAAATGATGGGTTT
CAAAGTTATATGGGTTCTCACCCACGAAAAATACTGGGAAAAATGTCCAT
GTGTGTAGTTGATCGCCAAATAATCTTTGCAGCACGTCAAAATAATGTGC
ATAATATTCTTTAACGTGATCCTTTTGGCCGGTATTTTTTGCCTcaatgc
caatgattagtttttttttccaaaaaataataaGGTAATCCCATTCTTGA
TTATATCCTTTTTCCTGGGCATCCTTTTCAAATTGGAAAGAATGTAATAT
GACTGAGTCCTTCAAATTTTCACAAGTTTTTAATCGGTCAAACAAATCAT
GCTCAAGCTTTTCCCCGATTGCATTCTTATTTCCAGTATGATCCAAATCC
AAATCTTTATTCTTAGAGGGTTTTCCATTATACTCTTTGGACCAAAAAAC
GGGTGGAATAAAAACAGCCTGTCGATTGTCAAGTTCTTTCTGATATTCTC
TATTTAAAAGAAAGTCTGCTGTTTCAAGAATATCATTTGAACATTCGTTG
CCTCCTAATTTGAACTTTTCCTGTTGTTTTTTAACTAGGCCACTCAGCCT
CGCTGCTTCCGGTCCATATGgcttttttttagcaatttcacTTATTACTT
TAAGAGCTTCAATGATTGATCGGTATACTACCTTAGGTTTCAGCCTTTTC
AGTTTTTCCGCCATATGAACTACATCTATGCCAT Run BLAST on NCBI protein sequence of TCONS_00068070-protein >TCONS_00068070-protein ID=TCONS_00068070-protein|Name=TCONS_00068070-protein|organism=Clytia hemisphaerica|type=polypeptide|length=360bp
GIDVVHMAEKLKRLKPKVVYRSIIEALKVISEIAKKKPYGPEAARLSGLV
KKQQEKFKLGGNECSNDILETADFLLNREYQKELDNRQAVFIPPVFWSKE
YNGKPSKNKDLDLDHTGNKNAIGEKLEHDLFDRLKTCENLKDSVILHSFQ
FEKDAQEKGYNQEWDYLIIFWKKKLIIGIEAKNTGQKDHVKEYYAHYFDV
LQRLFGDQLHTWTFFPVFFVGENPYNFETHHFISNSKDTDVDGWLSSICG
RYPDSFSTADNVLTDMKDVLKIMVFILHIGTAVLGSNWVERISNLIEEIP
AERILFYNKQQLPVLSDNNNPKYSKVIVSSGYGCGKTTILKEKAKRLSET
EDFKGHILYL Run BLAST on NCBI transcript from alignment at scaffold_478:436947..438030 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068070 ID=TCONS_00068070|Name=TCONS_00068070|organism=Clytia hemisphaerica|type=transcript|length=1084bp|location=Sequence derived from alignment at scaffold_478:436947..438030 (Clytia hemisphaerica)
ATGGCATAGATGTAGTTCATATGGCGGAAAAACTGAAAAGGCTGAAACCT
AAGGTAGTATACCGATCAATCATTGAAGCTCTTAAAGTAATAAgtgaaat
tgctaaaaaaaagcCATATGGACCGGAAGCAGCGAGGCTGAGTGGCCTAG
TTAAAAAACAACAGGAAAAGTTCAAATTAGGAGGCAACGAATGTTCAAAT
GATATTCTTGAAACAGCAGACTTTCTTTTAAATAGAGAATATCAGAAAGA
ACTTGACAATCGACAGGCTGTTTTTATTCCACCCGTTTTTTGGTCCAAAG
AGTATAATGGAAAACCCTCTAAGAATAAAGATTTGGATTTGGATCATACT
GGAAATAAGAATGCAATCGGGGAAAAGCTTGAGCATGATTTGTTTGACCG
ATTAAAAACTTGTGAAAATTTGAAGGACTCAGTCATATTACATTCTTTCC
AATTTGAAAAGGATGCCCAGGAAAAAGGATATAATCAAGAATGGGATTAC
CttattattttttggaaaaaaaaactaatcattggcattgAGGCAAAAAA
TACCGGCCAAAAGGATCACGTTAAAGAATATTATGCACATTATTTTGACG
TGCTGCAAAGATTATTTGGCGATCAACTACACACATGGACATTTTTCCCA
GTATTTTTCGTGGGTGAGAACCCATATAACTTTGAAACCCATCATTTCAT
TAGTAATAGTAAGGATACAGATGTTGACGGTTGGTTATCTAGCATTTGTG
GCAGATACCCAGACAGCTTTTCAACCGCAGACAATGTTTTGACAGACATG
AAGGATGTATTGAAAATTATGGTGTTCATCCTCCATATCGGAACAGCAGT
TCTTGGTTCCAACTGGGTAGAACGTATTAGTAATTTAATCGAAGAGATAC
CCGCCGAAAGGATTCTGTTTTATAACAAACAACAATTACCAGTACTTAGT
GATAATAATAATCCCAAATATTCCAAAGTAATAGTTTCATCTGGTTATGG
ATGCGGAAAAACAACGATCCTGAAAGAGAAGGCAAAACGGCTGAGTGAAA
CTGAGGATTTCAAAGGACATATCTTGTATTTGAC Coding sequence (CDS) from alignment at scaffold_478:436947..438030 >TCONS_00068070 ID=TCONS_00068070|Name=TCONS_00068070|organism=Clytia hemisphaerica|type=CDS|length=1080bp|location=Sequence derived from alignment at scaffold_478:436947..438030 (Clytia hemisphaerica)
GGCATAGATGTAGTTCATATGGCGGAAAAACTGAAAAGGCTGAAACCTAA
GGTAGTATACCGATCAATCATTGAAGCTCTTAAAGTAATAAgtgaaattg
ctaaaaaaaagcCATATGGACCGGAAGCAGCGAGGCTGAGTGGCCTAGTT
AAAAAACAACAGGAAAAGTTCAAATTAGGAGGCAACGAATGTTCAAATGA
TATTCTTGAAACAGCAGACTTTCTTTTAAATAGAGAATATCAGAAAGAAC
TTGACAATCGACAGGCTGTTTTTATTCCACCCGTTTTTTGGTCCAAAGAG
TATAATGGAAAACCCTCTAAGAATAAAGATTTGGATTTGGATCATACTGG
AAATAAGAATGCAATCGGGGAAAAGCTTGAGCATGATTTGTTTGACCGAT
TAAAAACTTGTGAAAATTTGAAGGACTCAGTCATATTACATTCTTTCCAA
TTTGAAAAGGATGCCCAGGAAAAAGGATATAATCAAGAATGGGATTACCt
tattattttttggaaaaaaaaactaatcattggcattgAGGCAAAAAATA
CCGGCCAAAAGGATCACGTTAAAGAATATTATGCACATTATTTTGACGTG
CTGCAAAGATTATTTGGCGATCAACTACACACATGGACATTTTTCCCAGT
ATTTTTCGTGGGTGAGAACCCATATAACTTTGAAACCCATCATTTCATTA
GTAATAGTAAGGATACAGATGTTGACGGTTGGTTATCTAGCATTTGTGGC
AGATACCCAGACAGCTTTTCAACCGCAGACAATGTTTTGACAGACATGAA
GGATGTATTGAAAATTATGGTGTTCATCCTCCATATCGGAACAGCAGTTC
TTGGTTCCAACTGGGTAGAACGTATTAGTAATTTAATCGAAGAGATACCC
GCCGAAAGGATTCTGTTTTATAACAAACAACAATTACCAGTACTTAGTGA
TAATAATAATCCCAAATATTCCAAAGTAATAGTTTCATCTGGTTATGGAT
GCGGAAAAACAACGATCCTGAAAGAGAAGGCAAAACGGCTGAGTGAAACT
GAGGATTTCAAAGGACATATCTTGTATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068070-exon-scaffold_478-1491911889:436947..438030 | TCONS_00068070-exon-scaffold_478-1491911889:436947..438030 | Clytia hemisphaerica | exon |
| TCONS_00068070-exon-scaffold_478-1510915933:436947..438030 | TCONS_00068070-exon-scaffold_478-1510915933:436947..438030 | Clytia hemisphaerica | exon |
| TCONS_00068070-exon-scaffold_478-1575043694:436947..438030 | TCONS_00068070-exon-scaffold_478-1575043694:436947..438030 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_478 | supercontig | scaffold_478:436947..438030 . |
Blast
The following BLAST results are available for this feature:
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