TCONS_00068068 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068068
Unique NameTCONS_00068068
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length328

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068068 ID=TCONS_00068068|Name=TCONS_00068068|organism=Clytia hemisphaerica|type=transcript|length=328bp
TGTGCATATACTCCGCCCTCCAGTTCGAAATCGATTAATCTGGAGGTGAG
CTAGATGATTTATGAAACGACATCCCTTTATCTCACCACTGGCCACTATC
CGATCTCATCGTCATTACACCAAAGAGAGACTACATGAAAACGAGGCTGA
TCTAATTCACGTGATTCATACGTCAAAGAGAGGCTACATCAGAACGAGGC
CAGAAGATTGAATCAAACAAAGCTAGAATGAGAAGCAGAAGGTACTACTC
ATTTATTCAGCTTCGCCGCATGGTTGCCATGgttacttttatttgacttt
ctTTGACGCTTTAGGCTCGAATATCCgt
Run BLAST on NCBI

transcript from alignment at scaffold_478:416027..416354

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068068 ID=TCONS_00068068|Name=TCONS_00068068|organism=Clytia hemisphaerica|type=transcript|length=328bp|location=Sequence derived from alignment at scaffold_478:416027..416354 (Clytia hemisphaerica)
acGGATATTCGAGCCTAAAGCGTCAAagaaagtcaaataaaagtaacCAT
GGCAACCATGCGGCGAAGCTGAATAAATGAGTAGTACCTTCTGCTTCTCA
TTCTAGCTTTGTTTGATTCAATCTTCTGGCCTCGTTCTGATGTAGCCTCT
CTTTGACGTATGAATCACGTGAATTAGATCAGCCTCGTTTTCATGTAGTC
TCTCTTTGGTGTAATGACGATGAGATCGGATAGTGGCCAGTGGTGAGATA
AAGGGATGTCGTTTCATAAATCATCTAGCTCACCTCCAGATTAATCGATT
TCGAACTGGAGGGCGGAGTATATGCACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042495XLOC_042495Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068068-exon-scaffold_478-1491911889:416027..416354TCONS_00068068-exon-scaffold_478-1491911889:416027..416354Clytia hemisphaericaexon
TCONS_00068068-exon-scaffold_478-1510915933:416027..416354TCONS_00068068-exon-scaffold_478-1510915933:416027..416354Clytia hemisphaericaexon
TCONS_00068068-exon-scaffold_478-1575043694:416027..416354TCONS_00068068-exon-scaffold_478-1575043694:416027..416354Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:416027..416354 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.19248	0.290714	0.675094	0.660474	0.402032	0	0	0	0	0	0	0	0.19827	0.823623	0	0	0.223798	0	0	0	0	0	0	0	0.960235	2.57096	1.63513	0.436263	0.33089	1.01137
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068068 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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